RNA–Protein interactions for RNA: ENST00000454011.6

RHOA-206, Transcript of ras homolog family member A, humanhuman

TSL 2 BASIC

Gene RHOA, Length 889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOA-206ENST00000454011 NISCHQ9Y2I1 1504 aa38.35■■■■□ 3.73
RHOA-206ENST00000454011 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
RHOA-206ENST00000454011 ABCC9O60706 1549 aa33.17■■■□□ 2.9
RHOA-206ENST00000454011 NACADO15069 1562 aa32.1■■■□□ 2.73
RHOA-206ENST00000454011 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
RHOA-206ENST00000454011 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
RHOA-206ENST00000454011 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
RHOA-206ENST00000454011 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
RHOA-206ENST00000454011 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
RHOA-206ENST00000454011 UNC13AQ9UPW8 1703 aa31.23■■■□□ 2.59
RHOA-206ENST00000454011 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
RHOA-206ENST00000454011 SHROOM4Q9ULL8 1493 aa30.98■■■□□ 2.55
RHOA-206ENST00000454011 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.55
RHOA-206ENST00000454011 SCRIBQ14160 1630 aa30.91■■■□□ 2.54
RHOA-206ENST00000454011 DNAJC5BQ9UF47 199 aa30.49■■■□□ 2.47
RHOA-206ENST00000454011 EIF4G1Q04637 1599 aaKnown RBP30.25■■■□□ 2.43
RHOA-206ENST00000454011 CC2D2AQ9P2K1 1620 aa30.07■■■□□ 2.4
RHOA-206ENST00000454011 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
RHOA-206ENST00000454011 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
RHOA-206ENST00000454011 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
RHOA-206ENST00000454011 NCAPD3P42695 1498 aa29.66■■■□□ 2.34
RHOA-206ENST00000454011 ATAD2BQ9ULI0 1458 aa29.59■■■□□ 2.33
RHOA-206ENST00000454011 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
RHOA-206ENST00000454011 PEG3Q9GZU2 1588 aa29.57■■■□□ 2.32
RHOA-206ENST00000454011 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
RHOA-206ENST00000454011 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
RHOA-206ENST00000454011 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
RHOA-206ENST00000454011 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
RHOA-206ENST00000454011 WIZO95785 1651 aa29.09■■■□□ 2.25
RHOA-206ENST00000454011 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
RHOA-206ENST00000454011 LAMC3Q9Y6N6 1575 aa28.8■■■□□ 2.2
RHOA-206ENST00000454011 CADPSQ9ULU8 1353 aa28.73■■■□□ 2.19
RHOA-206ENST00000454011 NESP48681 1621 aa28.72■■■□□ 2.19
RHOA-206ENST00000454011 PDS5BQ9NTI5 1447 aa28.6■■■□□ 2.17
RHOA-206ENST00000454011 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
RHOA-206ENST00000454011 CFTRP13569 1480 aa28.59■■■□□ 2.17
RHOA-206ENST00000454011 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
RHOA-206ENST00000454011 CUX2O14529 1486 aa28.47■■■□□ 2.15
RHOA-206ENST00000454011 THOC2Q8NI27 1593 aaKnown RBP28.38■■■□□ 2.13
RHOA-206ENST00000454011 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
RHOA-206ENST00000454011 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
RHOA-206ENST00000454011 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
RHOA-206ENST00000454011 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
RHOA-206ENST00000454011 PRDM2Q13029 1718 aa28.26■■■□□ 2.12
RHOA-206ENST00000454011 SUPT5HO00267 1087 aaKnown RBP28.22■■■□□ 2.11
RHOA-206ENST00000454011 WDR62O43379 1518 aa28.22■■■□□ 2.11
RHOA-206ENST00000454011 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
RHOA-206ENST00000454011 ABCC8Q09428 1581 aa28■■■□□ 2.07
RHOA-206ENST00000454011 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
RHOA-206ENST00000454011 TOPBP1Q92547 1522 aa27.89■■■□□ 2.06
RHOA-206ENST00000454011 DNMBPQ6XZF7 1577 aa27.87■■■□□ 2.05
RHOA-206ENST00000454011 IFT140Q96RY7 1462 aa27.76■■■□□ 2.03
RHOA-206ENST00000454011 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
RHOA-206ENST00000454011 CUX1P39880 1505 aa27.66■■■□□ 2.02
RHOA-206ENST00000454011 TARBP1Q13395 1621 aaKnown RBP27.6■■■□□ 2.01
RHOA-206ENST00000454011 FGD5Q6ZNL6 1462 aa27.55■■■□□ 2
RHOA-206ENST00000454011 ZNF608Q9ULD9 1512 aaPredicted RBP27.52■■■□□ 2
RHOA-206ENST00000454011 SOGA1O94964 1423 aa27.52■■■□□ 2
RHOA-206ENST00000454011 WDR97A6NE52 1622 aa27.52■■■□□ 2
RHOA-206ENST00000454011 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
RHOA-206ENST00000454011 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
RHOA-206ENST00000454011 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
RHOA-206ENST00000454011 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
RHOA-206ENST00000454011 EIF4G3O43432 1585 aaKnown RBP27.43■■□□□ 1.98
RHOA-206ENST00000454011 ABCA10Q8WWZ4 1543 aa27.38■■□□□ 1.97
RHOA-206ENST00000454011 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
RHOA-206ENST00000454011 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.971e-7■■■■□ 19.7
RHOA-206ENST00000454011 TDRD9Q8NDG6 1382 aaKnown RBP27.31■■□□□ 1.96
RHOA-206ENST00000454011 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
RHOA-206ENST00000454011 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
RHOA-206ENST00000454011 OSCARQ8IYS5 282 aa27.22■■□□□ 1.95
RHOA-206ENST00000454011 GAPVD1Q14C86 1478 aa27.21■■□□□ 1.95
RHOA-206ENST00000454011 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.95
RHOA-206ENST00000454011 SNAPC4Q5SXM2 1469 aa27.12■■□□□ 1.93
RHOA-206ENST00000454011 PBRM1Q86U86 1689 aa27.08■■□□□ 1.92
RHOA-206ENST00000454011 SYNJ2O15056 1496 aa27.07■■□□□ 1.92
RHOA-206ENST00000454011 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
RHOA-206ENST00000454011 CHD1O14646 1710 aa27.01■■□□□ 1.91
RHOA-206ENST00000454011 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
RHOA-206ENST00000454011 FHAD1B1AJZ9 1412 aa26.95■■□□□ 1.9
RHOA-206ENST00000454011 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
RHOA-206ENST00000454011 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
RHOA-206ENST00000454011 FBLN2P98095 1184 aa26.9■■□□□ 1.9
RHOA-206ENST00000454011 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
RHOA-206ENST00000454011 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
RHOA-206ENST00000454011 IGF1RP08069 1367 aa26.86■■□□□ 1.89
RHOA-206ENST00000454011 NUP160Q12769 1436 aa26.82■■□□□ 1.88
RHOA-206ENST00000454011 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
RHOA-206ENST00000454011 CUL7Q14999 1698 aa26.76■■□□□ 1.87
RHOA-206ENST00000454011 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
RHOA-206ENST00000454011 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
RHOA-206ENST00000454011 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
RHOA-206ENST00000454011 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
RHOA-206ENST00000454011 CEP170Q5SW79 1584 aa26.69■■□□□ 1.86
RHOA-206ENST00000454011 CARMIL1Q5VZK9 1371 aa26.67■■□□□ 1.86
RHOA-206ENST00000454011 SHROOM2Q13796 1616 aa26.6■■□□□ 1.85
RHOA-206ENST00000454011 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
RHOA-206ENST00000454011 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
RHOA-206ENST00000454011 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
RHOA-206ENST00000454011 EEA1Q15075 1411 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms