RNA–Protein interactions for RNA: ENST00000560033.5

PSMA4-217, Transcript of proteasome subunit alpha 4, humanhuman

TSL 4

Gene PSMA4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-217ENST00000560033 AEBP2Q6ZN18 517 aaPredicted RBP27.29■■□□□ 1.96
PSMA4-217ENST00000560033 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
PSMA4-217ENST00000560033 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
PSMA4-217ENST00000560033 SENP3Q9H4L4 574 aaPredicted RBP23.11■■□□□ 1.29
PSMA4-217ENST00000560033 FOXD1Q16676 465 aa21.51■■□□□ 1.03
PSMA4-217ENST00000560033 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
PSMA4-217ENST00000560033 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
PSMA4-217ENST00000560033 ADRA2BP18089 450 aa20.46■□□□□ 0.87
PSMA4-217ENST00000560033 PIAS4Q8N2W9 510 aaPredicted RBP20.15■□□□□ 0.82
PSMA4-217ENST00000560033 MSH5O43196 834 aa19.87■□□□□ 0.77
PSMA4-217ENST00000560033 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
PSMA4-217ENST00000560033 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
PSMA4-217ENST00000560033 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
PSMA4-217ENST00000560033 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
PSMA4-217ENST00000560033 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
PSMA4-217ENST00000560033 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
PSMA4-217ENST00000560033 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
PSMA4-217ENST00000560033 KCNA4P22459 653 aa18.06■□□□□ 0.48
PSMA4-217ENST00000560033 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
PSMA4-217ENST00000560033 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
PSMA4-217ENST00000560033 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
PSMA4-217ENST00000560033 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
PSMA4-217ENST00000560033 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
PSMA4-217ENST00000560033 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
PSMA4-217ENST00000560033 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
PSMA4-217ENST00000560033 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
PSMA4-217ENST00000560033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
PSMA4-217ENST00000560033 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
PSMA4-217ENST00000560033 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
PSMA4-217ENST00000560033 ZBTB22O15209 634 aa16.67■□□□□ 0.26
PSMA4-217ENST00000560033 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
PSMA4-217ENST00000560033 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
PSMA4-217ENST00000560033 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
PSMA4-217ENST00000560033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
PSMA4-217ENST00000560033 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
PSMA4-217ENST00000560033 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
PSMA4-217ENST00000560033 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
PSMA4-217ENST00000560033 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
PSMA4-217ENST00000560033 APLP2Q06481 763 aa16.31■□□□□ 0.2
PSMA4-217ENST00000560033 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
PSMA4-217ENST00000560033 CAPN15O75808 1086 aa16.24■□□□□ 0.19
PSMA4-217ENST00000560033 ATF5Q9Y2D1 282 aaPredicted RBP16.17■□□□□ 0.18
PSMA4-217ENST00000560033 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
PSMA4-217ENST00000560033 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
PSMA4-217ENST00000560033 DSG3P32926 999 aa16.15■□□□□ 0.18
PSMA4-217ENST00000560033 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
PSMA4-217ENST00000560033 ABCB7O75027 752 aa15.93■□□□□ 0.14
PSMA4-217ENST00000560033 POLA2Q14181 598 aa15.85■□□□□ 0.13
PSMA4-217ENST00000560033 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
PSMA4-217ENST00000560033 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
PSMA4-217ENST00000560033 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
PSMA4-217ENST00000560033 FBLN2P98095 1184 aa15.38■□□□□ 0.05
PSMA4-217ENST00000560033 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
PSMA4-217ENST00000560033 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
PSMA4-217ENST00000560033 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
PSMA4-217ENST00000560033 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
PSMA4-217ENST00000560033 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
PSMA4-217ENST00000560033 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
PSMA4-217ENST00000560033 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
PSMA4-217ENST00000560033 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
PSMA4-217ENST00000560033 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
PSMA4-217ENST00000560033 SPDYE4A6NLX3 237 aa14.92□□□□□ -0.02
PSMA4-217ENST00000560033 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
PSMA4-217ENST00000560033 PROM2Q8N271 834 aa14.82□□□□□ -0.04
PSMA4-217ENST00000560033 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
PSMA4-217ENST00000560033 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
PSMA4-217ENST00000560033 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
PSMA4-217ENST00000560033 FKBP8Q14318 412 aa14.71□□□□□ -0.05
PSMA4-217ENST00000560033 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
PSMA4-217ENST00000560033 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
PSMA4-217ENST00000560033 POTEHQ6S545 545 aa14.58□□□□□ -0.08
PSMA4-217ENST00000560033 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
PSMA4-217ENST00000560033 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
PSMA4-217ENST00000560033 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
PSMA4-217ENST00000560033 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
PSMA4-217ENST00000560033 CREBZFQ9NS37 354 aa14.36□□□□□ -0.11
PSMA4-217ENST00000560033 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
PSMA4-217ENST00000560033 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
PSMA4-217ENST00000560033 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
PSMA4-217ENST00000560033 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
PSMA4-217ENST00000560033 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
PSMA4-217ENST00000560033 MIER1Q8N108 512 aa14.11□□□□□ -0.15
PSMA4-217ENST00000560033 VASPP50552 380 aaPredicted RBP14.09□□□□□ -0.15
PSMA4-217ENST00000560033 HAX1O00165 279 aa14.07□□□□□ -0.16
PSMA4-217ENST00000560033 EVX2Q03828 476 aa14.07□□□□□ -0.16
PSMA4-217ENST00000560033 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
PSMA4-217ENST00000560033 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
PSMA4-217ENST00000560033 PLEKHG5O94827 1062 aa14□□□□□ -0.17
PSMA4-217ENST00000560033 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
PSMA4-217ENST00000560033 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
PSMA4-217ENST00000560033 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
PSMA4-217ENST00000560033 NUBP1P53384 320 aa13.92□□□□□ -0.18
PSMA4-217ENST00000560033 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
PSMA4-217ENST00000560033 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
PSMA4-217ENST00000560033 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
PSMA4-217ENST00000560033 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
PSMA4-217ENST00000560033 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
PSMA4-217ENST00000560033 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
PSMA4-217ENST00000560033 CCDC180Q9P1Z9 1646 aa13.78□□□□□ -0.2
PSMA4-217ENST00000560033 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms