RNA–Protein interactions for RNA: ENST00000612728.4

ZNHIT3-202, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 1 (best)

Gene ZNHIT3, Length 1,981 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-202ENST00000612728 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
ZNHIT3-202ENST00000612728 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
ZNHIT3-202ENST00000612728 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
ZNHIT3-202ENST00000612728 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
ZNHIT3-202ENST00000612728 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
ZNHIT3-202ENST00000612728 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
ZNHIT3-202ENST00000612728 ABCC9O60706 1549 aa24.45■■□□□ 1.5
ZNHIT3-202ENST00000612728 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
ZNHIT3-202ENST00000612728 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
ZNHIT3-202ENST00000612728 NACADO15069 1562 aa24.2■■□□□ 1.46
ZNHIT3-202ENST00000612728 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
ZNHIT3-202ENST00000612728 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
ZNHIT3-202ENST00000612728 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
ZNHIT3-202ENST00000612728 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
ZNHIT3-202ENST00000612728 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
ZNHIT3-202ENST00000612728 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
ZNHIT3-202ENST00000612728 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
ZNHIT3-202ENST00000612728 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.29
ZNHIT3-202ENST00000612728 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
ZNHIT3-202ENST00000612728 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
ZNHIT3-202ENST00000612728 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
ZNHIT3-202ENST00000612728 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
ZNHIT3-202ENST00000612728 WIZO95785 1651 aa22.86■■□□□ 1.25
ZNHIT3-202ENST00000612728 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
ZNHIT3-202ENST00000612728 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
ZNHIT3-202ENST00000612728 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
ZNHIT3-202ENST00000612728 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
ZNHIT3-202ENST00000612728 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
ZNHIT3-202ENST00000612728 BAZ1BQ9UIG0 1483 aaKnown RBP22.4■■□□□ 1.18
ZNHIT3-202ENST00000612728 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
ZNHIT3-202ENST00000612728 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
ZNHIT3-202ENST00000612728 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
ZNHIT3-202ENST00000612728 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
ZNHIT3-202ENST00000612728 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
ZNHIT3-202ENST00000612728 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
ZNHIT3-202ENST00000612728 CFTRP13569 1480 aa21.84■■□□□ 1.09
ZNHIT3-202ENST00000612728 WRNQ14191 1432 aaPredicted RBP eCLIP21.81■■□□□ 1.08
ZNHIT3-202ENST00000612728 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
ZNHIT3-202ENST00000612728 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
ZNHIT3-202ENST00000612728 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
ZNHIT3-202ENST00000612728 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
ZNHIT3-202ENST00000612728 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
ZNHIT3-202ENST00000612728 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
ZNHIT3-202ENST00000612728 LOC105371045A0A1W2PR82 267 aa21.6■■□□□ 1.05
ZNHIT3-202ENST00000612728 EEA1Q15075 1411 aa21.57■■□□□ 1.04
ZNHIT3-202ENST00000612728 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
ZNHIT3-202ENST00000612728 CUX1P39880 1505 aa21.54■■□□□ 1.04
ZNHIT3-202ENST00000612728 SOGA1O94964 1423 aa21.53■■□□□ 1.04
ZNHIT3-202ENST00000612728 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
ZNHIT3-202ENST00000612728 NESP48681 1621 aa21.49■■□□□ 1.03
ZNHIT3-202ENST00000612728 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
ZNHIT3-202ENST00000612728 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
ZNHIT3-202ENST00000612728 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
ZNHIT3-202ENST00000612728 CEP164Q9UPV0 1460 aa21.37■■□□□ 1.01
ZNHIT3-202ENST00000612728 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
ZNHIT3-202ENST00000612728 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
ZNHIT3-202ENST00000612728 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
ZNHIT3-202ENST00000612728 KIF21BO75037 1637 aa21.29■■□□□ 1
ZNHIT3-202ENST00000612728 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
ZNHIT3-202ENST00000612728 TOPBP1Q92547 1522 aa21.28■■□□□ 1
ZNHIT3-202ENST00000612728 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
ZNHIT3-202ENST00000612728 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
ZNHIT3-202ENST00000612728 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
ZNHIT3-202ENST00000612728 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
ZNHIT3-202ENST00000612728 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
ZNHIT3-202ENST00000612728 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
ZNHIT3-202ENST00000612728 CUX2O14529 1486 aa21.16■□□□□ 0.98
ZNHIT3-202ENST00000612728 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
ZNHIT3-202ENST00000612728 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
ZNHIT3-202ENST00000612728 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
ZNHIT3-202ENST00000612728 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
ZNHIT3-202ENST00000612728 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
ZNHIT3-202ENST00000612728 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
ZNHIT3-202ENST00000612728 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
ZNHIT3-202ENST00000612728 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
ZNHIT3-202ENST00000612728 RAD54L2Q9Y4B4 1467 aa21.08■□□□□ 0.97
ZNHIT3-202ENST00000612728 WDR97A6NE52 1622 aa21.08■□□□□ 0.96
ZNHIT3-202ENST00000612728 IGF1RP08069 1367 aa21.02■□□□□ 0.96
ZNHIT3-202ENST00000612728 WDR62O43379 1518 aa21■□□□□ 0.95
ZNHIT3-202ENST00000612728 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
ZNHIT3-202ENST00000612728 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
ZNHIT3-202ENST00000612728 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
ZNHIT3-202ENST00000612728 CUL7Q14999 1698 aa20.93■□□□□ 0.94
ZNHIT3-202ENST00000612728 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
ZNHIT3-202ENST00000612728 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
ZNHIT3-202ENST00000612728 CLIP1P30622 1438 aa20.9■□□□□ 0.94
ZNHIT3-202ENST00000612728 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.93
ZNHIT3-202ENST00000612728 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
ZNHIT3-202ENST00000612728 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
ZNHIT3-202ENST00000612728 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
ZNHIT3-202ENST00000612728 VPS8Q8N3P4 1428 aa20.75■□□□□ 0.91
ZNHIT3-202ENST00000612728 TRIM26Q12899 539 aaPredicted RBP20.74■□□□□ 0.91
ZNHIT3-202ENST00000612728 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.913e-7■■■□□ 17
ZNHIT3-202ENST00000612728 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
ZNHIT3-202ENST00000612728 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
ZNHIT3-202ENST00000612728 CTTNBP2Q8WZ74 1663 aa20.71■□□□□ 0.91
ZNHIT3-202ENST00000612728 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
ZNHIT3-202ENST00000612728 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
ZNHIT3-202ENST00000612728 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
ZNHIT3-202ENST00000612728 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms