RNA–Protein interactions for RNA: ENST00000602414.5

SNHG8-201, Transcript of small nucleolar RNA host gene 8, humanhuman

TSL 1 (best) BASIC

Gene SNHG8, Length 672 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG8-201ENST00000602414 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
SNHG8-201ENST00000602414 ABCC9O60706 1549 aa36.67■■■■□ 3.46
SNHG8-201ENST00000602414 CCDC180Q9P1Z9 1646 aa36.25■■■■□ 3.39
SNHG8-201ENST00000602414 DNAJC5BQ9UF47 199 aa34.79■■■■□ 3.16
SNHG8-201ENST00000602414 RB1CC1Q8TDY2 1594 aa34.78■■■■□ 3.16
SNHG8-201ENST00000602414 NACADO15069 1562 aa34.47■■■■□ 3.11
SNHG8-201ENST00000602414 DCAF8L2P0C7V8 631 aa34.2■■■■□ 3.07
SNHG8-201ENST00000602414 PABPN1Q86U42 306 aaKnown RBP eCLIP34.12■■■■□ 3.05
SNHG8-201ENST00000602414 MYO15BQ96JP2 1530 aa33.93■■■■□ 3.02
SNHG8-201ENST00000602414 UNC13AQ9UPW8 1703 aa33.74■■■□□ 2.99
SNHG8-201ENST00000602414 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
SNHG8-201ENST00000602414 SHROOM4Q9ULL8 1493 aa33.4■■■□□ 2.94
SNHG8-201ENST00000602414 DCAF1Q9Y4B6 1507 aa33.3■■■□□ 2.92
SNHG8-201ENST00000602414 ZCCHC6Q5VYS8 1495 aaKnown RBP33.27■■■□□ 2.92
SNHG8-201ENST00000602414 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
SNHG8-201ENST00000602414 CC2D2AQ9P2K1 1620 aa33.08■■■□□ 2.89
SNHG8-201ENST00000602414 EIF4G1Q04637 1599 aaKnown RBP32.95■■■□□ 2.86
SNHG8-201ENST00000602414 SCRIBQ14160 1630 aa32.95■■■□□ 2.86
SNHG8-201ENST00000602414 DNAJC5Q9H3Z4 198 aa32.38■■■□□ 2.77
SNHG8-201ENST00000602414 CUX2O14529 1486 aa31.89■■■□□ 2.7
SNHG8-201ENST00000602414 NCAPD3P42695 1498 aa31.86■■■□□ 2.69
SNHG8-201ENST00000602414 ERCC6Q03468 1493 aa31.77■■■□□ 2.68
SNHG8-201ENST00000602414 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
SNHG8-201ENST00000602414 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
SNHG8-201ENST00000602414 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
SNHG8-201ENST00000602414 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
SNHG8-201ENST00000602414 NESP48681 1621 aa31.35■■■□□ 2.61
SNHG8-201ENST00000602414 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
SNHG8-201ENST00000602414 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
SNHG8-201ENST00000602414 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
SNHG8-201ENST00000602414 LAMC3Q9Y6N6 1575 aa31.15■■■□□ 2.58
SNHG8-201ENST00000602414 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
SNHG8-201ENST00000602414 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.57
SNHG8-201ENST00000602414 MROH2BQ7Z745 1585 aa30.96■■■□□ 2.55
SNHG8-201ENST00000602414 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
SNHG8-201ENST00000602414 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
SNHG8-201ENST00000602414 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
SNHG8-201ENST00000602414 TRIM41Q8WV44 630 aa30.7■■■□□ 2.51
SNHG8-201ENST00000602414 WDR62O43379 1518 aa30.66■■■□□ 2.5
SNHG8-201ENST00000602414 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
SNHG8-201ENST00000602414 WIZO95785 1651 aa30.5■■■□□ 2.47
SNHG8-201ENST00000602414 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
SNHG8-201ENST00000602414 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
SNHG8-201ENST00000602414 CFTRP13569 1480 aa30.42■■■□□ 2.46
SNHG8-201ENST00000602414 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
SNHG8-201ENST00000602414 URB2Q14146 1524 aaKnown RBP30.2■■■□□ 2.42
SNHG8-201ENST00000602414 TOP2AP11388 1531 aaKnown RBP30.19■■■□□ 2.42
SNHG8-201ENST00000602414 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
SNHG8-201ENST00000602414 ZNF608Q9ULD9 1512 aaPredicted RBP29.88■■■□□ 2.37
SNHG8-201ENST00000602414 RIMBP3CA6NJZ7 1639 aa29.87■■■□□ 2.37
SNHG8-201ENST00000602414 RIMBP3BA6NNM3 1639 aa29.87■■■□□ 2.37
SNHG8-201ENST00000602414 RIMBP3Q9UFD9 1639 aa29.87■■■□□ 2.37
SNHG8-201ENST00000602414 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
SNHG8-201ENST00000602414 PRDM2Q13029 1718 aa29.85■■■□□ 2.37
SNHG8-201ENST00000602414 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
SNHG8-201ENST00000602414 TOPBP1Q92547 1522 aa29.82■■■□□ 2.36
SNHG8-201ENST00000602414 ARHGEF11O15085 1522 aa29.8■■■□□ 2.36
SNHG8-201ENST00000602414 CYB5RLQ6IPT4 315 aa29.68■■■□□ 2.34
SNHG8-201ENST00000602414 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
SNHG8-201ENST00000602414 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
SNHG8-201ENST00000602414 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.333e-9■■■■□ 23
SNHG8-201ENST00000602414 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
SNHG8-201ENST00000602414 FBLN2P98095 1184 aa29.54■■■□□ 2.32
SNHG8-201ENST00000602414 POLA1P09884 1462 aaPredicted RBP29.5■■■□□ 2.31
SNHG8-201ENST00000602414 TRHP20396 242 aaPredicted RBP29.49■■■□□ 2.31
SNHG8-201ENST00000602414 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
SNHG8-201ENST00000602414 CHD1O14646 1710 aa29.44■■■□□ 2.3
SNHG8-201ENST00000602414 SOGA1O94964 1423 aa29.41■■■□□ 2.3
SNHG8-201ENST00000602414 TDRD9Q8NDG6 1382 aaKnown RBP29.38■■■□□ 2.29
SNHG8-201ENST00000602414 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
SNHG8-201ENST00000602414 WDR97A6NE52 1622 aa29.32■■■□□ 2.28
SNHG8-201ENST00000602414 CHMP7Q8WUX9 453 aaPredicted RBP29.31■■■□□ 2.28
SNHG8-201ENST00000602414 SNAPC4Q5SXM2 1469 aa29.27■■■□□ 2.28
SNHG8-201ENST00000602414 MAGI1Q96QZ7 1491 aaPredicted RBP29.25■■■□□ 2.27
SNHG8-201ENST00000602414 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
SNHG8-201ENST00000602414 CLASP1Q7Z460 1538 aa29.22■■■□□ 2.27
SNHG8-201ENST00000602414 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
SNHG8-201ENST00000602414 SYNJ1O43426 1573 aa29.21■■■□□ 2.27
SNHG8-201ENST00000602414 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
SNHG8-201ENST00000602414 CUX1P39880 1505 aa29.12■■■□□ 2.25
SNHG8-201ENST00000602414 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
SNHG8-201ENST00000602414 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
SNHG8-201ENST00000602414 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
SNHG8-201ENST00000602414 PBRM1Q86U86 1689 aa28.86■■■□□ 2.21
SNHG8-201ENST00000602414 ABCA5Q8WWZ7 1642 aa28.83■■■□□ 2.21
SNHG8-201ENST00000602414 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
SNHG8-201ENST00000602414 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
SNHG8-201ENST00000602414 NUP160Q12769 1436 aa28.74■■■□□ 2.19
SNHG8-201ENST00000602414 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
SNHG8-201ENST00000602414 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
SNHG8-201ENST00000602414 ADAMTS12P58397 1594 aa28.65■■■□□ 2.18
SNHG8-201ENST00000602414 ERCC6L2Q5T890 1561 aa28.65■■■□□ 2.18
SNHG8-201ENST00000602414 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
SNHG8-201ENST00000602414 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
SNHG8-201ENST00000602414 SHROOM2Q13796 1616 aa28.57■■■□□ 2.16
SNHG8-201ENST00000602414 TOP2BQ02880 1626 aa28.56■■■□□ 2.16
SNHG8-201ENST00000602414 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
SNHG8-201ENST00000602414 PRG4Q92954 1404 aaPredicted RBP28.5■■■□□ 2.15
SNHG8-201ENST00000602414 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
SNHG8-201ENST00000602414 NPM1P06748 294 aaKnown RBP eCLIP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms