RNA–Protein interactions for RNA: ENST00000619446.1

ZNHIT3-206, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 3

Gene ZNHIT3, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-206ENST00000619446 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
ZNHIT3-206ENST00000619446 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
ZNHIT3-206ENST00000619446 ABCC9O60706 1549 aa22.79■■□□□ 1.24
ZNHIT3-206ENST00000619446 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
ZNHIT3-206ENST00000619446 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
ZNHIT3-206ENST00000619446 NACADO15069 1562 aa21.67■■□□□ 1.06
ZNHIT3-206ENST00000619446 DCAF8L2P0C7V8 631 aa21.66■■□□□ 1.06
ZNHIT3-206ENST00000619446 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
ZNHIT3-206ENST00000619446 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
ZNHIT3-206ENST00000619446 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
ZNHIT3-206ENST00000619446 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
ZNHIT3-206ENST00000619446 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
ZNHIT3-206ENST00000619446 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
ZNHIT3-206ENST00000619446 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
ZNHIT3-206ENST00000619446 BICRAQ9NZM4 1560 aa21.12■□□□□ 0.97
ZNHIT3-206ENST00000619446 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
ZNHIT3-206ENST00000619446 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
ZNHIT3-206ENST00000619446 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
ZNHIT3-206ENST00000619446 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
ZNHIT3-206ENST00000619446 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
ZNHIT3-206ENST00000619446 NCAPD3P42695 1498 aa20.03■□□□□ 0.8
ZNHIT3-206ENST00000619446 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
ZNHIT3-206ENST00000619446 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
ZNHIT3-206ENST00000619446 DNAJC5Q9H3Z4 198 aa19.93■□□□□ 0.78
ZNHIT3-206ENST00000619446 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
ZNHIT3-206ENST00000619446 BAZ1AQ9NRL2 1556 aaPredicted RBP19.88■□□□□ 0.77
ZNHIT3-206ENST00000619446 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
ZNHIT3-206ENST00000619446 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
ZNHIT3-206ENST00000619446 CUX2O14529 1486 aa19.76■□□□□ 0.75
ZNHIT3-206ENST00000619446 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
ZNHIT3-206ENST00000619446 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
ZNHIT3-206ENST00000619446 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
ZNHIT3-206ENST00000619446 NESP48681 1621 aa19.62■□□□□ 0.73
ZNHIT3-206ENST00000619446 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
ZNHIT3-206ENST00000619446 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
ZNHIT3-206ENST00000619446 WIZO95785 1651 aa19.51■□□□□ 0.71
ZNHIT3-206ENST00000619446 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
ZNHIT3-206ENST00000619446 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
ZNHIT3-206ENST00000619446 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
ZNHIT3-206ENST00000619446 THOC2Q8NI27 1593 aaKnown RBP19.38■□□□□ 0.69
ZNHIT3-206ENST00000619446 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
ZNHIT3-206ENST00000619446 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
ZNHIT3-206ENST00000619446 CFTRP13569 1480 aa19.22■□□□□ 0.67
ZNHIT3-206ENST00000619446 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
ZNHIT3-206ENST00000619446 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
ZNHIT3-206ENST00000619446 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
ZNHIT3-206ENST00000619446 WDR62O43379 1518 aa19.15■□□□□ 0.66
ZNHIT3-206ENST00000619446 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
ZNHIT3-206ENST00000619446 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
ZNHIT3-206ENST00000619446 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
ZNHIT3-206ENST00000619446 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
ZNHIT3-206ENST00000619446 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
ZNHIT3-206ENST00000619446 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
ZNHIT3-206ENST00000619446 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
ZNHIT3-206ENST00000619446 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
ZNHIT3-206ENST00000619446 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
ZNHIT3-206ENST00000619446 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
ZNHIT3-206ENST00000619446 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
ZNHIT3-206ENST00000619446 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
ZNHIT3-206ENST00000619446 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
ZNHIT3-206ENST00000619446 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.573e-7■■■□□ 17
ZNHIT3-206ENST00000619446 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
ZNHIT3-206ENST00000619446 SOGA1O94964 1423 aa18.6■□□□□ 0.57
ZNHIT3-206ENST00000619446 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
ZNHIT3-206ENST00000619446 RIMBP3CA6NJZ7 1639 aa18.56■□□□□ 0.56
ZNHIT3-206ENST00000619446 RIMBP3BA6NNM3 1639 aa18.56■□□□□ 0.56
ZNHIT3-206ENST00000619446 RIMBP3Q9UFD9 1639 aa18.56■□□□□ 0.56
ZNHIT3-206ENST00000619446 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
ZNHIT3-206ENST00000619446 CUX1P39880 1505 aa18.54■□□□□ 0.56
ZNHIT3-206ENST00000619446 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
ZNHIT3-206ENST00000619446 FBLN2P98095 1184 aa18.49■□□□□ 0.55
ZNHIT3-206ENST00000619446 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
ZNHIT3-206ENST00000619446 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
ZNHIT3-206ENST00000619446 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
ZNHIT3-206ENST00000619446 CHD1O14646 1710 aa18.44■□□□□ 0.54
ZNHIT3-206ENST00000619446 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
ZNHIT3-206ENST00000619446 GRIN2BQ13224 1484 aa18.39■□□□□ 0.54
ZNHIT3-206ENST00000619446 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
ZNHIT3-206ENST00000619446 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
ZNHIT3-206ENST00000619446 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
ZNHIT3-206ENST00000619446 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
ZNHIT3-206ENST00000619446 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
ZNHIT3-206ENST00000619446 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
ZNHIT3-206ENST00000619446 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
ZNHIT3-206ENST00000619446 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
ZNHIT3-206ENST00000619446 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
ZNHIT3-206ENST00000619446 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
ZNHIT3-206ENST00000619446 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
ZNHIT3-206ENST00000619446 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.51
ZNHIT3-206ENST00000619446 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
ZNHIT3-206ENST00000619446 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
ZNHIT3-206ENST00000619446 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
ZNHIT3-206ENST00000619446 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
ZNHIT3-206ENST00000619446 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
ZNHIT3-206ENST00000619446 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
ZNHIT3-206ENST00000619446 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
ZNHIT3-206ENST00000619446 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
ZNHIT3-206ENST00000619446 NUP160Q12769 1436 aa18.09■□□□□ 0.49
ZNHIT3-206ENST00000619446 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
ZNHIT3-206ENST00000619446 JPH4Q96JJ6 628 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms