RNA–Protein interactions for RNA: ENST00000559948.5

PSMA4-216, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-216ENST00000559948 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
PSMA4-216ENST00000559948 AEBP2Q6ZN18 517 aaPredicted RBP20.04■□□□□ 0.8
PSMA4-216ENST00000559948 ABCC9O60706 1549 aa19.87■□□□□ 0.77
PSMA4-216ENST00000559948 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
PSMA4-216ENST00000559948 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
PSMA4-216ENST00000559948 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
PSMA4-216ENST00000559948 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
PSMA4-216ENST00000559948 NACADO15069 1562 aa18.76■□□□□ 0.59
PSMA4-216ENST00000559948 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
PSMA4-216ENST00000559948 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
PSMA4-216ENST00000559948 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
PSMA4-216ENST00000559948 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
PSMA4-216ENST00000559948 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
PSMA4-216ENST00000559948 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.52
PSMA4-216ENST00000559948 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
PSMA4-216ENST00000559948 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
PSMA4-216ENST00000559948 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
PSMA4-216ENST00000559948 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
PSMA4-216ENST00000559948 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
PSMA4-216ENST00000559948 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
PSMA4-216ENST00000559948 NCAPD3P42695 1498 aa17.4■□□□□ 0.38
PSMA4-216ENST00000559948 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
PSMA4-216ENST00000559948 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
PSMA4-216ENST00000559948 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
PSMA4-216ENST00000559948 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
PSMA4-216ENST00000559948 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
PSMA4-216ENST00000559948 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
PSMA4-216ENST00000559948 CUX2O14529 1486 aa17.12■□□□□ 0.33
PSMA4-216ENST00000559948 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
PSMA4-216ENST00000559948 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
PSMA4-216ENST00000559948 NESP48681 1621 aa17.09■□□□□ 0.33
PSMA4-216ENST00000559948 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
PSMA4-216ENST00000559948 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
PSMA4-216ENST00000559948 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
PSMA4-216ENST00000559948 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
PSMA4-216ENST00000559948 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
PSMA4-216ENST00000559948 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
PSMA4-216ENST00000559948 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
PSMA4-216ENST00000559948 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
PSMA4-216ENST00000559948 WIZO95785 1651 aa16.81■□□□□ 0.28
PSMA4-216ENST00000559948 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
PSMA4-216ENST00000559948 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
PSMA4-216ENST00000559948 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
PSMA4-216ENST00000559948 CFTRP13569 1480 aa16.65■□□□□ 0.26
PSMA4-216ENST00000559948 WDR62O43379 1518 aa16.65■□□□□ 0.26
PSMA4-216ENST00000559948 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
PSMA4-216ENST00000559948 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
PSMA4-216ENST00000559948 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
PSMA4-216ENST00000559948 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
PSMA4-216ENST00000559948 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
PSMA4-216ENST00000559948 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
PSMA4-216ENST00000559948 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
PSMA4-216ENST00000559948 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
PSMA4-216ENST00000559948 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
PSMA4-216ENST00000559948 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
PSMA4-216ENST00000559948 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
PSMA4-216ENST00000559948 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
PSMA4-216ENST00000559948 DNMBPQ6XZF7 1577 aa16.2■□□□□ 0.18
PSMA4-216ENST00000559948 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.184e-7■■■■□ 26.1
PSMA4-216ENST00000559948 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
PSMA4-216ENST00000559948 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
PSMA4-216ENST00000559948 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
PSMA4-216ENST00000559948 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
PSMA4-216ENST00000559948 SOGA1O94964 1423 aa16.1■□□□□ 0.17
PSMA4-216ENST00000559948 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
PSMA4-216ENST00000559948 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
PSMA4-216ENST00000559948 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
PSMA4-216ENST00000559948 TDRD9Q8NDG6 1382 aaKnown RBP16.08■□□□□ 0.16
PSMA4-216ENST00000559948 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
PSMA4-216ENST00000559948 FBLN2P98095 1184 aa16.04■□□□□ 0.16
PSMA4-216ENST00000559948 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
PSMA4-216ENST00000559948 CUX1P39880 1505 aa16.02■□□□□ 0.15
PSMA4-216ENST00000559948 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
PSMA4-216ENST00000559948 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
PSMA4-216ENST00000559948 CHD1O14646 1710 aa15.97■□□□□ 0.15
PSMA4-216ENST00000559948 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
PSMA4-216ENST00000559948 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
PSMA4-216ENST00000559948 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
PSMA4-216ENST00000559948 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
PSMA4-216ENST00000559948 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
PSMA4-216ENST00000559948 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
PSMA4-216ENST00000559948 CLASP1Q7Z460 1538 aa15.88■□□□□ 0.13
PSMA4-216ENST00000559948 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
PSMA4-216ENST00000559948 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
PSMA4-216ENST00000559948 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
PSMA4-216ENST00000559948 FOXD1Q16676 465 aa15.83■□□□□ 0.12
PSMA4-216ENST00000559948 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
PSMA4-216ENST00000559948 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
PSMA4-216ENST00000559948 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
PSMA4-216ENST00000559948 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
PSMA4-216ENST00000559948 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
PSMA4-216ENST00000559948 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
PSMA4-216ENST00000559948 GRIN2AQ12879 1464 aa15.71■□□□□ 0.1
PSMA4-216ENST00000559948 NUP160Q12769 1436 aa15.69■□□□□ 0.1
PSMA4-216ENST00000559948 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
PSMA4-216ENST00000559948 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
PSMA4-216ENST00000559948 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
PSMA4-216ENST00000559948 ADAMTS12P58397 1594 aa15.64■□□□□ 0.09
PSMA4-216ENST00000559948 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
PSMA4-216ENST00000559948 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms