RNA–Protein interactions for RNA: ENST00000524109.1

HSPA9-213, Transcript of heat shock protein family A (Hsp70) member 9, humanhuman

TSL 5

Gene HSPA9, Length 1,175 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA9-213ENST00000524109 AEBP2Q6ZN18 517 aaPredicted RBP34.08■■■■□ 3.05
HSPA9-213ENST00000524109 CHIC1Q5VXU3 224 aa33.44■■■□□ 2.94
HSPA9-213ENST00000524109 PHF23Q9BUL5 403 aaPredicted RBP29.35■■■□□ 2.29
HSPA9-213ENST00000524109 SENP3Q9H4L4 574 aaPredicted RBP29.03■■■□□ 2.24
HSPA9-213ENST00000524109 PLPPR3Q6T4P5 718 aa27.26■■□□□ 1.95
HSPA9-213ENST00000524109 FOXD1Q16676 465 aa26.86■■□□□ 1.89
HSPA9-213ENST00000524109 NISCHQ9Y2I1 1504 aa26.11■■□□□ 1.77
HSPA9-213ENST00000524109 ADRA2BP18089 450 aa25.91■■□□□ 1.74
HSPA9-213ENST00000524109 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
HSPA9-213ENST00000524109 PIAS4Q8N2W9 510 aaPredicted RBP25.44■■□□□ 1.66
HSPA9-213ENST00000524109 MSH5O43196 834 aa24.83■■□□□ 1.57
HSPA9-213ENST00000524109 PPP4R3CPQ6ZMV5 832 aa24■■□□□ 1.43
HSPA9-213ENST00000524109 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
HSPA9-213ENST00000524109 KCNA4P22459 653 aa23.5■■□□□ 1.35
HSPA9-213ENST00000524109 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
HSPA9-213ENST00000524109 MAPK8IP2Q13387 824 aaPredicted RBP23.46■■□□□ 1.35
HSPA9-213ENST00000524109 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
HSPA9-213ENST00000524109 ABCC9O60706 1549 aa23.39■■□□□ 1.34
HSPA9-213ENST00000524109 CNKSR2Q8WXI2 1034 aa23.33■■□□□ 1.33
HSPA9-213ENST00000524109 DMRT2Q9Y5R5 561 aa23.14■■□□□ 1.29
HSPA9-213ENST00000524109 NPM3O75607 178 aaKnown RBP23.02■■□□□ 1.28
HSPA9-213ENST00000524109 RNF216Q9NWF9 866 aaPredicted RBP22.83■■□□□ 1.25
HSPA9-213ENST00000524109 HOXD11P31277 338 aaPredicted RBP22.68■■□□□ 1.22
HSPA9-213ENST00000524109 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
HSPA9-213ENST00000524109 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
HSPA9-213ENST00000524109 DCAF8L1A6NGE4 600 aa22.28■■□□□ 1.16
HSPA9-213ENST00000524109 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
HSPA9-213ENST00000524109 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
HSPA9-213ENST00000524109 NACADO15069 1562 aa22.1■■□□□ 1.13
HSPA9-213ENST00000524109 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
HSPA9-213ENST00000524109 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
HSPA9-213ENST00000524109 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
HSPA9-213ENST00000524109 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.08
HSPA9-213ENST00000524109 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
HSPA9-213ENST00000524109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.074e-14■■■□□ 15.4
HSPA9-213ENST00000524109 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
HSPA9-213ENST00000524109 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
HSPA9-213ENST00000524109 FOXD4L1Q9NU39 408 aa21.66■■□□□ 1.06
HSPA9-213ENST00000524109 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
HSPA9-213ENST00000524109 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
HSPA9-213ENST00000524109 ZBTB22O15209 634 aa21.56■■□□□ 1.04
HSPA9-213ENST00000524109 CSRNP3Q8WYN3 585 aa21.55■■□□□ 1.04
HSPA9-213ENST00000524109 SCRIBQ14160 1630 aa21.33■■□□□ 1.01
HSPA9-213ENST00000524109 MYCNP04198 464 aaPredicted RBP21.33■■□□□ 1.01
HSPA9-213ENST00000524109 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
HSPA9-213ENST00000524109 U3KPZ7 1027 aaPredicted RBP21.28■■□□□ 1
HSPA9-213ENST00000524109 RNF39Q9H2S5 420 aa21.21■□□□□ 0.99
HSPA9-213ENST00000524109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
HSPA9-213ENST00000524109 HNRNPUL2Q1KMD3 747 aaKnown RBP21.17■□□□□ 0.98
HSPA9-213ENST00000524109 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
HSPA9-213ENST00000524109 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
HSPA9-213ENST00000524109 SAMD1Q6SPF0 538 aaPredicted RBP21.06■□□□□ 0.96
HSPA9-213ENST00000524109 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
HSPA9-213ENST00000524109 C1QBPQ07021 282 aaKnown RBP21.01■□□□□ 0.95
HSPA9-213ENST00000524109 APLP2Q06481 763 aa20.97■□□□□ 0.95
HSPA9-213ENST00000524109 ATXN8OSP0DMR3 200 aa20.89■□□□□ 0.93
HSPA9-213ENST00000524109 CACNB1Q02641 598 aaPredicted RBP20.7■□□□□ 0.9
HSPA9-213ENST00000524109 CAPN15O75808 1086 aa20.69■□□□□ 0.9
HSPA9-213ENST00000524109 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
HSPA9-213ENST00000524109 ATF5Q9Y2D1 282 aaPredicted RBP20.66■□□□□ 0.9
HSPA9-213ENST00000524109 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
HSPA9-213ENST00000524109 ZNF219Q9P2Y4 722 aaPredicted RBP20.6■□□□□ 0.89
HSPA9-213ENST00000524109 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
HSPA9-213ENST00000524109 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
HSPA9-213ENST00000524109 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
HSPA9-213ENST00000524109 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
HSPA9-213ENST00000524109 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
HSPA9-213ENST00000524109 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.84
HSPA9-213ENST00000524109 ABCB7O75027 752 aa20.26■□□□□ 0.83
HSPA9-213ENST00000524109 POLA2Q14181 598 aa20.25■□□□□ 0.83
HSPA9-213ENST00000524109 DSG3P32926 999 aa20.23■□□□□ 0.83
HSPA9-213ENST00000524109 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
HSPA9-213ENST00000524109 PEG3Q9GZU2 1588 aa20.18■□□□□ 0.82
HSPA9-213ENST00000524109 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
HSPA9-213ENST00000524109 NESP48681 1621 aa20.15■□□□□ 0.82
HSPA9-213ENST00000524109 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
HSPA9-213ENST00000524109 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
HSPA9-213ENST00000524109 CUX2O14529 1486 aa20.11■□□□□ 0.81
HSPA9-213ENST00000524109 ZBTB12Q9Y330 459 aaPredicted RBP19.97■□□□□ 0.79
HSPA9-213ENST00000524109 FBLN2P98095 1184 aa19.95■□□□□ 0.78
HSPA9-213ENST00000524109 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
HSPA9-213ENST00000524109 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
HSPA9-213ENST00000524109 WIZO95785 1651 aa19.9■□□□□ 0.78
HSPA9-213ENST00000524109 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
HSPA9-213ENST00000524109 CADPSQ9ULU8 1353 aa19.8■□□□□ 0.76
HSPA9-213ENST00000524109 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
HSPA9-213ENST00000524109 MKRN4PQ13434 485 aaPredicted RBP19.75■□□□□ 0.75
HSPA9-213ENST00000524109 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
HSPA9-213ENST00000524109 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
HSPA9-213ENST00000524109 WDR62O43379 1518 aa19.65■□□□□ 0.74
HSPA9-213ENST00000524109 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
HSPA9-213ENST00000524109 CFTRP13569 1480 aa19.6■□□□□ 0.73
HSPA9-213ENST00000524109 FANCD2Q9BXW9 1451 aa19.57■□□□□ 0.72
HSPA9-213ENST00000524109 FKBP8Q14318 412 aa19.57■□□□□ 0.72
HSPA9-213ENST00000524109 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
HSPA9-213ENST00000524109 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
HSPA9-213ENST00000524109 SPDYE4A6NLX3 237 aa19.46■□□□□ 0.71
HSPA9-213ENST00000524109 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
HSPA9-213ENST00000524109 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
HSPA9-213ENST00000524109 SPDYE2BA6NHP3 402 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms