RNA–Protein interactions for RNA: ENST00000622312.4

ZNHIT3-212, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 4

Gene ZNHIT3, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-212ENST00000622312 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
ZNHIT3-212ENST00000622312 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
ZNHIT3-212ENST00000622312 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
ZNHIT3-212ENST00000622312 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
ZNHIT3-212ENST00000622312 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
ZNHIT3-212ENST00000622312 FOXD1Q16676 465 aa20.67■□□□□ 0.9
ZNHIT3-212ENST00000622312 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
ZNHIT3-212ENST00000622312 ADRA2BP18089 450 aa19.84■□□□□ 0.77
ZNHIT3-212ENST00000622312 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
ZNHIT3-212ENST00000622312 MSH5O43196 834 aa19.01■□□□□ 0.63
ZNHIT3-212ENST00000622312 PPP4R3CPQ6ZMV5 832 aa18.25■□□□□ 0.51
ZNHIT3-212ENST00000622312 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
ZNHIT3-212ENST00000622312 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
ZNHIT3-212ENST00000622312 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
ZNHIT3-212ENST00000622312 KCNA4P22459 653 aa17.82■□□□□ 0.44
ZNHIT3-212ENST00000622312 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
ZNHIT3-212ENST00000622312 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
ZNHIT3-212ENST00000622312 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
ZNHIT3-212ENST00000622312 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.4
ZNHIT3-212ENST00000622312 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
ZNHIT3-212ENST00000622312 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
ZNHIT3-212ENST00000622312 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
ZNHIT3-212ENST00000622312 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
ZNHIT3-212ENST00000622312 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
ZNHIT3-212ENST00000622312 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
ZNHIT3-212ENST00000622312 ABCC9O60706 1549 aa16.66■□□□□ 0.26
ZNHIT3-212ENST00000622312 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
ZNHIT3-212ENST00000622312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
ZNHIT3-212ENST00000622312 ZBTB22O15209 634 aa16.44■□□□□ 0.22
ZNHIT3-212ENST00000622312 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
ZNHIT3-212ENST00000622312 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
ZNHIT3-212ENST00000622312 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
ZNHIT3-212ENST00000622312 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
ZNHIT3-212ENST00000622312 U3KPZ7 1027 aaPredicted RBP16.3■□□□□ 0.2
ZNHIT3-212ENST00000622312 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
ZNHIT3-212ENST00000622312 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
ZNHIT3-212ENST00000622312 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
ZNHIT3-212ENST00000622312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
ZNHIT3-212ENST00000622312 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
ZNHIT3-212ENST00000622312 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
ZNHIT3-212ENST00000622312 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
ZNHIT3-212ENST00000622312 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
ZNHIT3-212ENST00000622312 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
ZNHIT3-212ENST00000622312 APLP2Q06481 763 aa15.79■□□□□ 0.12
ZNHIT3-212ENST00000622312 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
ZNHIT3-212ENST00000622312 CAPN15O75808 1086 aa15.74■□□□□ 0.11
ZNHIT3-212ENST00000622312 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
ZNHIT3-212ENST00000622312 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
ZNHIT3-212ENST00000622312 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
ZNHIT3-212ENST00000622312 NACADO15069 1562 aa15.58■□□□□ 0.09
ZNHIT3-212ENST00000622312 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
ZNHIT3-212ENST00000622312 DSG3P32926 999 aa15.52■□□□□ 0.08
ZNHIT3-212ENST00000622312 DNAJC5Q9H3Z4 198 aa15.51■□□□□ 0.07
ZNHIT3-212ENST00000622312 ABCB7O75027 752 aa15.48■□□□□ 0.07
ZNHIT3-212ENST00000622312 POLA2Q14181 598 aa15.41■□□□□ 0.06
ZNHIT3-212ENST00000622312 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
ZNHIT3-212ENST00000622312 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
ZNHIT3-212ENST00000622312 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
ZNHIT3-212ENST00000622312 BICRAQ9NZM4 1560 aa15.22■□□□□ 0.03
ZNHIT3-212ENST00000622312 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
ZNHIT3-212ENST00000622312 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
ZNHIT3-212ENST00000622312 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
ZNHIT3-212ENST00000622312 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
ZNHIT3-212ENST00000622312 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
ZNHIT3-212ENST00000622312 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
ZNHIT3-212ENST00000622312 FBLN2P98095 1184 aa15.04■□□□□ -0
ZNHIT3-212ENST00000622312 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
ZNHIT3-212ENST00000622312 OSCARQ8IYS5 282 aa14.93□□□□□ -0.02
ZNHIT3-212ENST00000622312 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
ZNHIT3-212ENST00000622312 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
ZNHIT3-212ENST00000622312 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
ZNHIT3-212ENST00000622312 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
ZNHIT3-212ENST00000622312 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
ZNHIT3-212ENST00000622312 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
ZNHIT3-212ENST00000622312 SPDYE4A6NLX3 237 aa14.69□□□□□ -0.06
ZNHIT3-212ENST00000622312 FKBP8Q14318 412 aa14.67□□□□□ -0.06
ZNHIT3-212ENST00000622312 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
ZNHIT3-212ENST00000622312 CUX2O14529 1486 aa14.64□□□□□ -0.07
ZNHIT3-212ENST00000622312 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
ZNHIT3-212ENST00000622312 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
ZNHIT3-212ENST00000622312 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
ZNHIT3-212ENST00000622312 PROM2Q8N271 834 aa14.49□□□□□ -0.09
ZNHIT3-212ENST00000622312 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
ZNHIT3-212ENST00000622312 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
ZNHIT3-212ENST00000622312 NCAPD3P42695 1498 aa14.41□□□□□ -0.1
ZNHIT3-212ENST00000622312 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
ZNHIT3-212ENST00000622312 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
ZNHIT3-212ENST00000622312 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
ZNHIT3-212ENST00000622312 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
ZNHIT3-212ENST00000622312 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
ZNHIT3-212ENST00000622312 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
ZNHIT3-212ENST00000622312 CLEC11AQ9Y240 323 aa14.22□□□□□ -0.13
ZNHIT3-212ENST00000622312 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
ZNHIT3-212ENST00000622312 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
ZNHIT3-212ENST00000622312 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
ZNHIT3-212ENST00000622312 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
ZNHIT3-212ENST00000622312 NESP48681 1621 aa14.15□□□□□ -0.14
ZNHIT3-212ENST00000622312 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
ZNHIT3-212ENST00000622312 THOC2Q8NI27 1593 aaKnown RBP14.1□□□□□ -0.15
ZNHIT3-212ENST00000622312 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms