RNA–Protein interactions for RNA: ENST00000616269.1

ZNHIT3-203, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 3

Gene ZNHIT3, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-203ENST00000616269 NISCHQ9Y2I1 1504 aa17.9■□□□□ 0.46
ZNHIT3-203ENST00000616269 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
ZNHIT3-203ENST00000616269 ABCC9O60706 1549 aa16.45■□□□□ 0.22
ZNHIT3-203ENST00000616269 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
ZNHIT3-203ENST00000616269 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
ZNHIT3-203ENST00000616269 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
ZNHIT3-203ENST00000616269 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
ZNHIT3-203ENST00000616269 NACADO15069 1562 aa15.39■□□□□ 0.05
ZNHIT3-203ENST00000616269 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
ZNHIT3-203ENST00000616269 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
ZNHIT3-203ENST00000616269 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
ZNHIT3-203ENST00000616269 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
ZNHIT3-203ENST00000616269 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
ZNHIT3-203ENST00000616269 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
ZNHIT3-203ENST00000616269 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
ZNHIT3-203ENST00000616269 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
ZNHIT3-203ENST00000616269 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
ZNHIT3-203ENST00000616269 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
ZNHIT3-203ENST00000616269 EIF4G1Q04637 1599 aaKnown RBP14.75□□□□□ -0.05
ZNHIT3-203ENST00000616269 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
ZNHIT3-203ENST00000616269 SCRIBQ14160 1630 aa14.65□□□□□ -0.06
ZNHIT3-203ENST00000616269 CUX2O14529 1486 aa14.36□□□□□ -0.11
ZNHIT3-203ENST00000616269 PHF23Q9BUL5 403 aaPredicted RBP14.3□□□□□ -0.12
ZNHIT3-203ENST00000616269 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
ZNHIT3-203ENST00000616269 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
ZNHIT3-203ENST00000616269 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
ZNHIT3-203ENST00000616269 ATAD2BQ9ULI0 1458 aa14.13□□□□□ -0.15
ZNHIT3-203ENST00000616269 HMGXB3Q12766 1538 aa14.07□□□□□ -0.16
ZNHIT3-203ENST00000616269 SMARCA2P51531 1590 aa14.06□□□□□ -0.16
ZNHIT3-203ENST00000616269 NESP48681 1621 aa14.04□□□□□ -0.16
ZNHIT3-203ENST00000616269 SMARCA4P51532 1647 aa13.98□□□□□ -0.17
ZNHIT3-203ENST00000616269 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
ZNHIT3-203ENST00000616269 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
ZNHIT3-203ENST00000616269 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
ZNHIT3-203ENST00000616269 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
ZNHIT3-203ENST00000616269 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
ZNHIT3-203ENST00000616269 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.19
ZNHIT3-203ENST00000616269 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
ZNHIT3-203ENST00000616269 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
ZNHIT3-203ENST00000616269 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.21
ZNHIT3-203ENST00000616269 MROH2BQ7Z745 1585 aa13.76□□□□□ -0.21
ZNHIT3-203ENST00000616269 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
ZNHIT3-203ENST00000616269 WDR62O43379 1518 aa13.72□□□□□ -0.21
ZNHIT3-203ENST00000616269 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
ZNHIT3-203ENST00000616269 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
ZNHIT3-203ENST00000616269 FANCD2Q9BXW9 1451 aa13.6□□□□□ -0.23
ZNHIT3-203ENST00000616269 CFTRP13569 1480 aa13.57□□□□□ -0.24
ZNHIT3-203ENST00000616269 WIZO95785 1651 aa13.52□□□□□ -0.25
ZNHIT3-203ENST00000616269 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
ZNHIT3-203ENST00000616269 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
ZNHIT3-203ENST00000616269 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
ZNHIT3-203ENST00000616269 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
ZNHIT3-203ENST00000616269 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
ZNHIT3-203ENST00000616269 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
ZNHIT3-203ENST00000616269 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
ZNHIT3-203ENST00000616269 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
ZNHIT3-203ENST00000616269 ZNF608Q9ULD9 1512 aaPredicted RBP13.38□□□□□ -0.27
ZNHIT3-203ENST00000616269 CYB5RLQ6IPT4 315 aa13.34□□□□□ -0.27
ZNHIT3-203ENST00000616269 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
ZNHIT3-203ENST00000616269 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
ZNHIT3-203ENST00000616269 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
ZNHIT3-203ENST00000616269 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
ZNHIT3-203ENST00000616269 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
ZNHIT3-203ENST00000616269 FOXD1Q16676 465 aa13.26□□□□□ -0.29
ZNHIT3-203ENST00000616269 ARAP1Q96P48 1450 aa13.25□□□□□ -0.29
ZNHIT3-203ENST00000616269 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
ZNHIT3-203ENST00000616269 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
ZNHIT3-203ENST00000616269 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.293e-7■■■□□ 17
ZNHIT3-203ENST00000616269 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
ZNHIT3-203ENST00000616269 FBLN2P98095 1184 aa13.19□□□□□ -0.3
ZNHIT3-203ENST00000616269 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
ZNHIT3-203ENST00000616269 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
ZNHIT3-203ENST00000616269 CHD1O14646 1710 aa13.14□□□□□ -0.31
ZNHIT3-203ENST00000616269 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
ZNHIT3-203ENST00000616269 SOGA1O94964 1423 aa13.1□□□□□ -0.31
ZNHIT3-203ENST00000616269 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
ZNHIT3-203ENST00000616269 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.31
ZNHIT3-203ENST00000616269 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
ZNHIT3-203ENST00000616269 SNAPC4Q5SXM2 1469 aa13.07□□□□□ -0.32
ZNHIT3-203ENST00000616269 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
ZNHIT3-203ENST00000616269 MAGI1Q96QZ7 1491 aaPredicted RBP13.06□□□□□ -0.32
ZNHIT3-203ENST00000616269 SYNJ1O43426 1573 aa13.04□□□□□ -0.32
ZNHIT3-203ENST00000616269 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
ZNHIT3-203ENST00000616269 SYNJ2O15056 1496 aa13.01□□□□□ -0.33
ZNHIT3-203ENST00000616269 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
ZNHIT3-203ENST00000616269 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
ZNHIT3-203ENST00000616269 CUX1P39880 1505 aa12.95□□□□□ -0.34
ZNHIT3-203ENST00000616269 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
ZNHIT3-203ENST00000616269 NUP160Q12769 1436 aa12.85□□□□□ -0.35
ZNHIT3-203ENST00000616269 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
ZNHIT3-203ENST00000616269 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
ZNHIT3-203ENST00000616269 PBRM1Q86U86 1689 aa12.83□□□□□ -0.36
ZNHIT3-203ENST00000616269 ERCC6L2Q5T890 1561 aa12.82□□□□□ -0.36
ZNHIT3-203ENST00000616269 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
ZNHIT3-203ENST00000616269 FHAD1B1AJZ9 1412 aa12.78□□□□□ -0.36
ZNHIT3-203ENST00000616269 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
ZNHIT3-203ENST00000616269 ADAMTS12P58397 1594 aa12.76□□□□□ -0.37
ZNHIT3-203ENST00000616269 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
ZNHIT3-203ENST00000616269 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
ZNHIT3-203ENST00000616269 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms