RNA–Protein interactions for RNA: ENST00000639844.1

RPS27A-211, Transcript of ribosomal protein S27a, humanhuman

TSL 5 BASIC

Gene RPS27A, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-211ENST00000639844 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
RPS27A-211ENST00000639844 CCDC180Q9P1Z9 1646 aa41.98■■■■■ 4.31
RPS27A-211ENST00000639844 ABCC9O60706 1549 aa41.4■■■■■ 4.22
RPS27A-211ENST00000639844 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
RPS27A-211ENST00000639844 NACADO15069 1562 aa39.57■■■■□ 3.92
RPS27A-211ENST00000639844 DCAF8L2P0C7V8 631 aa39.42■■■■□ 3.9
RPS27A-211ENST00000639844 MYO15BQ96JP2 1530 aa39.24■■■■□ 3.87
RPS27A-211ENST00000639844 ZCCHC6Q5VYS8 1495 aaKnown RBP39.09■■■■□ 3.85
RPS27A-211ENST00000639844 DCAF1Q9Y4B6 1507 aa38.93■■■■□ 3.82
RPS27A-211ENST00000639844 UNC13AQ9UPW8 1703 aa38.73■■■■□ 3.79
RPS27A-211ENST00000639844 PABPN1Q86U42 306 aaKnown RBP eCLIP38.62■■■■□ 3.77
RPS27A-211ENST00000639844 BICRAQ9NZM4 1560 aa38.48■■■■□ 3.75
RPS27A-211ENST00000639844 DNAJC5BQ9UF47 199 aa38.35■■■■□ 3.73
RPS27A-211ENST00000639844 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
RPS27A-211ENST00000639844 SHROOM4Q9ULL8 1493 aa38.11■■■■□ 3.69
RPS27A-211ENST00000639844 EIF4G1Q04637 1599 aaKnown RBP37.51■■■■□ 3.59
RPS27A-211ENST00000639844 CC2D2AQ9P2K1 1620 aa37.43■■■■□ 3.58
RPS27A-211ENST00000639844 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.56
RPS27A-211ENST00000639844 SMARCA4P51532 1647 aa36.56■■■■□ 3.44
RPS27A-211ENST00000639844 NCAPD3P42695 1498 aa36.53■■■■□ 3.44
RPS27A-211ENST00000639844 BAZ1AQ9NRL2 1556 aaPredicted RBP36.49■■■■□ 3.43
RPS27A-211ENST00000639844 ATAD2BQ9ULI0 1458 aa36.47■■■■□ 3.43
RPS27A-211ENST00000639844 SMARCA2P51531 1590 aa36.41■■■■□ 3.42
RPS27A-211ENST00000639844 HMGXB3Q12766 1538 aa36.3■■■■□ 3.4
RPS27A-211ENST00000639844 PEG3Q9GZU2 1588 aa36.23■■■■□ 3.39
RPS27A-211ENST00000639844 MROH2BQ7Z745 1585 aa36.22■■■■□ 3.39
RPS27A-211ENST00000639844 BAZ1BQ9UIG0 1483 aaKnown RBP36.14■■■■□ 3.38
RPS27A-211ENST00000639844 WIZO95785 1651 aa35.79■■■■□ 3.32
RPS27A-211ENST00000639844 ERCC6Q03468 1493 aa35.73■■■■□ 3.31
RPS27A-211ENST00000639844 NESP48681 1621 aa35.71■■■■□ 3.31
RPS27A-211ENST00000639844 RSF1Q96T23 1441 aaPredicted RBP35.69■■■■□ 3.3
RPS27A-211ENST00000639844 LAMC3Q9Y6N6 1575 aa35.61■■■■□ 3.29
RPS27A-211ENST00000639844 CUX2O14529 1486 aa35.51■■■■□ 3.28
RPS27A-211ENST00000639844 CADPSQ9ULU8 1353 aa35.44■■■■□ 3.26
RPS27A-211ENST00000639844 TOP2AP11388 1531 aaKnown RBP35.42■■■■□ 3.26
RPS27A-211ENST00000639844 PDS5BQ9NTI5 1447 aa35.4■■■■□ 3.26
RPS27A-211ENST00000639844 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
RPS27A-211ENST00000639844 THOC2Q8NI27 1593 aaKnown RBP35.25■■■■□ 3.23
RPS27A-211ENST00000639844 CFTRP13569 1480 aa35.15■■■■□ 3.22
RPS27A-211ENST00000639844 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
RPS27A-211ENST00000639844 CCDC88BA6NC98 1476 aa35.01■■■■□ 3.19
RPS27A-211ENST00000639844 FANCD2Q9BXW9 1451 aa35.01■■■■□ 3.19
RPS27A-211ENST00000639844 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
RPS27A-211ENST00000639844 WDR62O43379 1518 aa34.92■■■■□ 3.18
RPS27A-211ENST00000639844 DNAJC5Q9H3Z4 198 aa34.87■■■■□ 3.17
RPS27A-211ENST00000639844 PRDM2Q13029 1718 aa34.81■■■■□ 3.16
RPS27A-211ENST00000639844 URB2Q14146 1524 aaKnown RBP34.67■■■■□ 3.14
RPS27A-211ENST00000639844 SUPT5HO00267 1087 aaKnown RBP34.48■■■■□ 3.11
RPS27A-211ENST00000639844 ABCC8Q09428 1581 aa34.43■■■■□ 3.1
RPS27A-211ENST00000639844 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
RPS27A-211ENST00000639844 DNMBPQ6XZF7 1577 aa34.33■■■■□ 3.09
RPS27A-211ENST00000639844 IFT140Q96RY7 1462 aa34.3■■■■□ 3.08
RPS27A-211ENST00000639844 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
RPS27A-211ENST00000639844 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
RPS27A-211ENST00000639844 TARBP1Q13395 1621 aaKnown RBP34.06■■■■□ 3.04
RPS27A-211ENST00000639844 CUX1P39880 1505 aa33.99■■■■□ 3.03
RPS27A-211ENST00000639844 EIF4G3O43432 1585 aaKnown RBP33.99■■■■□ 3.03
RPS27A-211ENST00000639844 OSCARQ8IYS5 282 aa33.99■■■■□ 3.03
RPS27A-211ENST00000639844 SOGA1O94964 1423 aa33.96■■■■□ 3.03
RPS27A-211ENST00000639844 FGD5Q6ZNL6 1462 aa33.95■■■■□ 3.02
RPS27A-211ENST00000639844 RAD54L2Q9Y4B4 1467 aa33.93■■■■□ 3.02
RPS27A-211ENST00000639844 AQRO60306 1485 aaKnown RBP eCLIP33.91■■■■□ 3.023e-8■■■■■ 53
RPS27A-211ENST00000639844 WDR97A6NE52 1622 aa33.8■■■■□ 3
RPS27A-211ENST00000639844 TDRD9Q8NDG6 1382 aaKnown RBP33.8■■■■□ 3
RPS27A-211ENST00000639844 WRNQ14191 1432 aaPredicted RBP eCLIP33.66■■■□□ 2.986e-18■□□□□ 8
RPS27A-211ENST00000639844 TOP2BQ02880 1626 aa33.62■■■□□ 2.97
RPS27A-211ENST00000639844 ABCA10Q8WWZ4 1543 aa33.62■■■□□ 2.97
RPS27A-211ENST00000639844 CHD1O14646 1710 aa33.62■■■□□ 2.97
RPS27A-211ENST00000639844 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
RPS27A-211ENST00000639844 GRIN2BQ13224 1484 aa33.61■■■□□ 2.97
RPS27A-211ENST00000639844 FBLN2P98095 1184 aa33.59■■■□□ 2.97
RPS27A-211ENST00000639844 SNAPC4Q5SXM2 1469 aa33.58■■■□□ 2.97
RPS27A-211ENST00000639844 SYNJ1O43426 1573 aa33.57■■■□□ 2.96
RPS27A-211ENST00000639844 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
RPS27A-211ENST00000639844 GAPVD1Q14C86 1478 aa33.55■■■□□ 2.96
RPS27A-211ENST00000639844 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
RPS27A-211ENST00000639844 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
RPS27A-211ENST00000639844 PBRM1Q86U86 1689 aa33.47■■■□□ 2.95
RPS27A-211ENST00000639844 CHMP7Q8WUX9 453 aaPredicted RBP33.46■■■□□ 2.95
RPS27A-211ENST00000639844 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
RPS27A-211ENST00000639844 RIMBP3CA6NJZ7 1639 aa33.43■■■□□ 2.94
RPS27A-211ENST00000639844 RIMBP3BA6NNM3 1639 aa33.43■■■□□ 2.94
RPS27A-211ENST00000639844 RIMBP3Q9UFD9 1639 aa33.43■■■□□ 2.94
RPS27A-211ENST00000639844 ARHGEF11O15085 1522 aa33.4■■■□□ 2.94
RPS27A-211ENST00000639844 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
RPS27A-211ENST00000639844 ERICH3Q5RHP9 1530 aa33.22■■■□□ 2.91
RPS27A-211ENST00000639844 ADAMTS12P58397 1594 aa33.2■■■□□ 2.91
RPS27A-211ENST00000639844 FHAD1B1AJZ9 1412 aa33.16■■■□□ 2.9
RPS27A-211ENST00000639844 GRIN2AQ12879 1464 aa33.16■■■□□ 2.9
RPS27A-211ENST00000639844 CYB5RLQ6IPT4 315 aa33.12■■■□□ 2.89
RPS27A-211ENST00000639844 ARAP1Q96P48 1450 aa33.1■■■□□ 2.89
RPS27A-211ENST00000639844 NUP160Q12769 1436 aa33.04■■■□□ 2.88
RPS27A-211ENST00000639844 KIF27Q86VH2 1401 aa33■■■□□ 2.87
RPS27A-211ENST00000639844 CEP170Q5SW79 1584 aa33■■■□□ 2.87
RPS27A-211ENST00000639844 IGF1RP08069 1367 aa32.92■■■□□ 2.86
RPS27A-211ENST00000639844 CUL7Q14999 1698 aa32.83■■■□□ 2.85
RPS27A-211ENST00000639844 SHROOM2Q13796 1616 aa32.82■■■□□ 2.84
RPS27A-211ENST00000639844 ERCC6L2Q5T890 1561 aa32.76■■■□□ 2.84
RPS27A-211ENST00000639844 RUSC2Q8N2Y8 1516 aa32.72■■■□□ 2.83
RPS27A-211ENST00000639844 JPH4Q96JJ6 628 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms