RNA–Protein interactions for RNA: ENST00000377982.8

ACTR2-202, Transcript of ARP2 actin related protein 2 homolog, humanhuman

TSL 1 (best) BASIC

Gene ACTR2, Length 2,685 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR2-202ENST00000377982 NISCHQ9Y2I1 1504 aa26.73■■□□□ 1.87
ACTR2-202ENST00000377982 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
ACTR2-202ENST00000377982 HRCP23327 699 aa23.04■■□□□ 1.28
ACTR2-202ENST00000377982 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
ACTR2-202ENST00000377982 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
ACTR2-202ENST00000377982 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
ACTR2-202ENST00000377982 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
ACTR2-202ENST00000377982 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
ACTR2-202ENST00000377982 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
ACTR2-202ENST00000377982 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
ACTR2-202ENST00000377982 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
ACTR2-202ENST00000377982 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
ACTR2-202ENST00000377982 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
ACTR2-202ENST00000377982 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
ACTR2-202ENST00000377982 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.1
ACTR2-202ENST00000377982 SLC24A1O60721 1099 aa21.8■■□□□ 1.08
ACTR2-202ENST00000377982 MYT1Q01538 1121 aa21.78■■□□□ 1.08
ACTR2-202ENST00000377982 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
ACTR2-202ENST00000377982 ABCC9O60706 1549 aa21.63■■□□□ 1.05
ACTR2-202ENST00000377982 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
ACTR2-202ENST00000377982 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
ACTR2-202ENST00000377982 EHMT2Q96KQ7 1210 aa21.52■■□□□ 1.04
ACTR2-202ENST00000377982 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.03
ACTR2-202ENST00000377982 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
ACTR2-202ENST00000377982 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1.01
ACTR2-202ENST00000377982 NEUROD1Q13562 356 aa21.27■■□□□ 1
ACTR2-202ENST00000377982 NACADO15069 1562 aa21.27■■□□□ 1
ACTR2-202ENST00000377982 GTF3C3Q9Y5Q9 886 aa21.2■□□□□ 0.98
ACTR2-202ENST00000377982 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
ACTR2-202ENST00000377982 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
ACTR2-202ENST00000377982 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
ACTR2-202ENST00000377982 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
ACTR2-202ENST00000377982 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
ACTR2-202ENST00000377982 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
ACTR2-202ENST00000377982 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
ACTR2-202ENST00000377982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
ACTR2-202ENST00000377982 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
ACTR2-202ENST00000377982 WIZO95785 1651 aa20.71■□□□□ 0.91
ACTR2-202ENST00000377982 FAM9AQ8IZU1 332 aaPredicted RBP20.65■□□□□ 0.9
ACTR2-202ENST00000377982 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
ACTR2-202ENST00000377982 TRIM41Q8WV44 630 aa20.58■□□□□ 0.88
ACTR2-202ENST00000377982 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
ACTR2-202ENST00000377982 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
ACTR2-202ENST00000377982 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
ACTR2-202ENST00000377982 PLPPR3Q6T4P5 718 aa20.5■□□□□ 0.87
ACTR2-202ENST00000377982 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
ACTR2-202ENST00000377982 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
ACTR2-202ENST00000377982 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
ACTR2-202ENST00000377982 ZNF316A6NFI3 1004 aaPredicted RBP20.37■□□□□ 0.85
ACTR2-202ENST00000377982 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.84
ACTR2-202ENST00000377982 KCNA4P22459 653 aa20.29■□□□□ 0.84
ACTR2-202ENST00000377982 MIER1Q8N108 512 aa20.29■□□□□ 0.84
ACTR2-202ENST00000377982 RTN4Q9NQC3 1192 aaKnown RBP20.28■□□□□ 0.84
ACTR2-202ENST00000377982 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
ACTR2-202ENST00000377982 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.83
ACTR2-202ENST00000377982 ANP32EQ9BTT0 268 aa20.25■□□□□ 0.83
ACTR2-202ENST00000377982 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
ACTR2-202ENST00000377982 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
ACTR2-202ENST00000377982 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
ACTR2-202ENST00000377982 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
ACTR2-202ENST00000377982 PEG3Q9GZU2 1588 aa20.07■□□□□ 0.8
ACTR2-202ENST00000377982 TSHZ2Q9NRE2 1034 aa20.07■□□□□ 0.8
ACTR2-202ENST00000377982 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.79
ACTR2-202ENST00000377982 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
ACTR2-202ENST00000377982 AMER1Q5JTC6 1135 aaPredicted RBP19.95■□□□□ 0.78
ACTR2-202ENST00000377982 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
ACTR2-202ENST00000377982 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
ACTR2-202ENST00000377982 SOGA1O94964 1423 aa19.76■□□□□ 0.75
ACTR2-202ENST00000377982 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
ACTR2-202ENST00000377982 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
ACTR2-202ENST00000377982 RUSC2Q8N2Y8 1516 aa19.72■□□□□ 0.75
ACTR2-202ENST00000377982 CEP162Q5TB80 1403 aa19.7■□□□□ 0.74
ACTR2-202ENST00000377982 PRKCSHP14314 528 aaPredicted RBP19.69■□□□□ 0.74
ACTR2-202ENST00000377982 BCANQ96GW7 911 aa19.68■□□□□ 0.74
ACTR2-202ENST00000377982 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
ACTR2-202ENST00000377982 NCAPD3P42695 1498 aa19.65■□□□□ 0.74
ACTR2-202ENST00000377982 RBM19Q9Y4C8 960 aaKnown RBP19.59■□□□□ 0.73
ACTR2-202ENST00000377982 FKBP8Q14318 412 aa19.54■□□□□ 0.72
ACTR2-202ENST00000377982 SLC4A1APQ9BWU0 796 aaKnown RBP19.53■□□□□ 0.72
ACTR2-202ENST00000377982 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
ACTR2-202ENST00000377982 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
ACTR2-202ENST00000377982 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
ACTR2-202ENST00000377982 EEA1Q15075 1411 aa19.49■□□□□ 0.71
ACTR2-202ENST00000377982 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
ACTR2-202ENST00000377982 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
ACTR2-202ENST00000377982 KCNH8Q96L42 1107 aa19.45■□□□□ 0.7
ACTR2-202ENST00000377982 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
ACTR2-202ENST00000377982 MSH5O43196 834 aa19.42■□□□□ 0.7
ACTR2-202ENST00000377982 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
ACTR2-202ENST00000377982 CFTRP13569 1480 aa19.41■□□□□ 0.7
ACTR2-202ENST00000377982 CUX1P39880 1505 aa19.4■□□□□ 0.7
ACTR2-202ENST00000377982 ITGAEP38570 1179 aa19.38■□□□□ 0.69
ACTR2-202ENST00000377982 NEFLP07196 543 aa19.36■□□□□ 0.69
ACTR2-202ENST00000377982 KIF21BO75037 1637 aa19.35■□□□□ 0.69
ACTR2-202ENST00000377982 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
ACTR2-202ENST00000377982 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
ACTR2-202ENST00000377982 ERICH6Q7L0X2 663 aa19.33■□□□□ 0.69
ACTR2-202ENST00000377982 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
ACTR2-202ENST00000377982 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
ACTR2-202ENST00000377982 APLP2Q06481 763 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms