RNA–Protein interactions for RNA: ENST00000602520.5

SNHG8-203, Transcript of small nucleolar RNA host gene 8, humanhuman

TSL 2

Gene SNHG8, Length 327 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG8-203ENST00000602520 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
SNHG8-203ENST00000602520 ABCC9O60706 1549 aa18.95■□□□□ 0.62
SNHG8-203ENST00000602520 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
SNHG8-203ENST00000602520 CCDC180Q9P1Z9 1646 aa18.42■□□□□ 0.54
SNHG8-203ENST00000602520 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
SNHG8-203ENST00000602520 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
SNHG8-203ENST00000602520 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
SNHG8-203ENST00000602520 NACADO15069 1562 aa17.53■□□□□ 0.4
SNHG8-203ENST00000602520 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNHG8-203ENST00000602520 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
SNHG8-203ENST00000602520 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
SNHG8-203ENST00000602520 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
SNHG8-203ENST00000602520 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
SNHG8-203ENST00000602520 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
SNHG8-203ENST00000602520 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
SNHG8-203ENST00000602520 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
SNHG8-203ENST00000602520 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
SNHG8-203ENST00000602520 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
SNHG8-203ENST00000602520 CUX2O14529 1486 aa16.7■□□□□ 0.26
SNHG8-203ENST00000602520 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
SNHG8-203ENST00000602520 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
SNHG8-203ENST00000602520 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
SNHG8-203ENST00000602520 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
SNHG8-203ENST00000602520 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
SNHG8-203ENST00000602520 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
SNHG8-203ENST00000602520 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
SNHG8-203ENST00000602520 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
SNHG8-203ENST00000602520 NESP48681 1621 aa16.1■□□□□ 0.17
SNHG8-203ENST00000602520 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
SNHG8-203ENST00000602520 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
SNHG8-203ENST00000602520 SMARCA2P51531 1590 aa15.96■□□□□ 0.14
SNHG8-203ENST00000602520 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
SNHG8-203ENST00000602520 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
SNHG8-203ENST00000602520 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
SNHG8-203ENST00000602520 BAZ1AQ9NRL2 1556 aaPredicted RBP15.85■□□□□ 0.13
SNHG8-203ENST00000602520 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
SNHG8-203ENST00000602520 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
SNHG8-203ENST00000602520 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
SNHG8-203ENST00000602520 WDR62O43379 1518 aa15.77■□□□□ 0.11
SNHG8-203ENST00000602520 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
SNHG8-203ENST00000602520 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
SNHG8-203ENST00000602520 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
SNHG8-203ENST00000602520 RIMBP3CA6NJZ7 1639 aa15.68■□□□□ 0.1
SNHG8-203ENST00000602520 RIMBP3BA6NNM3 1639 aa15.68■□□□□ 0.1
SNHG8-203ENST00000602520 RIMBP3Q9UFD9 1639 aa15.68■□□□□ 0.1
SNHG8-203ENST00000602520 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
SNHG8-203ENST00000602520 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
SNHG8-203ENST00000602520 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
SNHG8-203ENST00000602520 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
SNHG8-203ENST00000602520 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
SNHG8-203ENST00000602520 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
SNHG8-203ENST00000602520 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
SNHG8-203ENST00000602520 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
SNHG8-203ENST00000602520 ARAP1Q96P48 1450 aa15.33■□□□□ 0.05
SNHG8-203ENST00000602520 CFTRP13569 1480 aa15.33■□□□□ 0.04
SNHG8-203ENST00000602520 ZNF608Q9ULD9 1512 aaPredicted RBP15.27■□□□□ 0.04
SNHG8-203ENST00000602520 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
SNHG8-203ENST00000602520 WIZO95785 1651 aa15.25■□□□□ 0.03
SNHG8-203ENST00000602520 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
SNHG8-203ENST00000602520 CHD1O14646 1710 aa15.23■□□□□ 0.03
SNHG8-203ENST00000602520 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
SNHG8-203ENST00000602520 PRDM2Q13029 1718 aa15.18■□□□□ 0.02
SNHG8-203ENST00000602520 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
SNHG8-203ENST00000602520 FOXD1Q16676 465 aa15.09■□□□□ 0.01
SNHG8-203ENST00000602520 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
SNHG8-203ENST00000602520 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
SNHG8-203ENST00000602520 ABCC8Q09428 1581 aa15.03■□□□□ -0
SNHG8-203ENST00000602520 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
SNHG8-203ENST00000602520 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -03e-9■■■■□ 23
SNHG8-203ENST00000602520 DNMBPQ6XZF7 1577 aa14.99□□□□□ -0.01
SNHG8-203ENST00000602520 FBLN2P98095 1184 aa14.99□□□□□ -0.01
SNHG8-203ENST00000602520 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
SNHG8-203ENST00000602520 ILDR1Q86SU0 546 aaPredicted RBP14.95□□□□□ -0.02
SNHG8-203ENST00000602520 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
SNHG8-203ENST00000602520 WDR97A6NE52 1622 aa14.89□□□□□ -0.03
SNHG8-203ENST00000602520 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
SNHG8-203ENST00000602520 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
SNHG8-203ENST00000602520 MAGI1Q96QZ7 1491 aaPredicted RBP14.85□□□□□ -0.03
SNHG8-203ENST00000602520 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
SNHG8-203ENST00000602520 KIF13AQ9H1H9 1805 aa14.81□□□□□ -0.04
SNHG8-203ENST00000602520 TDRD9Q8NDG6 1382 aaKnown RBP14.81□□□□□ -0.04
SNHG8-203ENST00000602520 RAD54L2Q9Y4B4 1467 aa14.81□□□□□ -0.04
SNHG8-203ENST00000602520 CHMP7Q8WUX9 453 aaPredicted RBP14.8□□□□□ -0.04
SNHG8-203ENST00000602520 SYNJ2O15056 1496 aa14.8□□□□□ -0.04
SNHG8-203ENST00000602520 SOGA1O94964 1423 aa14.77□□□□□ -0.04
SNHG8-203ENST00000602520 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
SNHG8-203ENST00000602520 ERCC6L2Q5T890 1561 aa14.72□□□□□ -0.05
SNHG8-203ENST00000602520 KDM4FA0A1W2PPD8 638 aa14.71□□□□□ -0.05
SNHG8-203ENST00000602520 PBRM1Q86U86 1689 aa14.69□□□□□ -0.06
SNHG8-203ENST00000602520 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
SNHG8-203ENST00000602520 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
SNHG8-203ENST00000602520 SHROOM2Q13796 1616 aa14.63□□□□□ -0.07
SNHG8-203ENST00000602520 ABCC10Q5T3U5 1492 aa14.6□□□□□ -0.07
SNHG8-203ENST00000602520 KDM6BO15054 1643 aa14.59□□□□□ -0.07
SNHG8-203ENST00000602520 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
SNHG8-203ENST00000602520 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
SNHG8-203ENST00000602520 CUX1P39880 1505 aa14.57□□□□□ -0.08
SNHG8-203ENST00000602520 NUP160Q12769 1436 aa14.57□□□□□ -0.08
SNHG8-203ENST00000602520 DIP2BQ9P265 1576 aa14.56□□□□□ -0.08
SNHG8-203ENST00000602520 MAPKBP1O60336 1514 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms