RNA–Protein interactions for RNA: ENST00000617429.4

ZNHIT3-204, Transcript of zinc finger HIT-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNHIT3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-204ENST00000617429 NISCHQ9Y2I1 1504 aa20.36■□□□□ 0.85
ZNHIT3-204ENST00000617429 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
ZNHIT3-204ENST00000617429 ABCC9O60706 1549 aa17.65■□□□□ 0.42
ZNHIT3-204ENST00000617429 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
ZNHIT3-204ENST00000617429 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
ZNHIT3-204ENST00000617429 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
ZNHIT3-204ENST00000617429 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
ZNHIT3-204ENST00000617429 NACADO15069 1562 aa16.94■□□□□ 0.3
ZNHIT3-204ENST00000617429 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
ZNHIT3-204ENST00000617429 DCAF1Q9Y4B6 1507 aa16.79■□□□□ 0.28
ZNHIT3-204ENST00000617429 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
ZNHIT3-204ENST00000617429 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
ZNHIT3-204ENST00000617429 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
ZNHIT3-204ENST00000617429 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
ZNHIT3-204ENST00000617429 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
ZNHIT3-204ENST00000617429 SHROOM4Q9ULL8 1493 aa16.27■□□□□ 0.19
ZNHIT3-204ENST00000617429 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
ZNHIT3-204ENST00000617429 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
ZNHIT3-204ENST00000617429 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
ZNHIT3-204ENST00000617429 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
ZNHIT3-204ENST00000617429 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
ZNHIT3-204ENST00000617429 BAZ1AQ9NRL2 1556 aaPredicted RBP15.77■□□□□ 0.11
ZNHIT3-204ENST00000617429 MROH2BQ7Z745 1585 aa15.73■□□□□ 0.11
ZNHIT3-204ENST00000617429 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
ZNHIT3-204ENST00000617429 SMARCA2P51531 1590 aa15.65■□□□□ 0.1
ZNHIT3-204ENST00000617429 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
ZNHIT3-204ENST00000617429 WIZO95785 1651 aa15.6■□□□□ 0.09
ZNHIT3-204ENST00000617429 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
ZNHIT3-204ENST00000617429 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
ZNHIT3-204ENST00000617429 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
ZNHIT3-204ENST00000617429 RSF1Q96T23 1441 aaPredicted RBP15.55■□□□□ 0.08
ZNHIT3-204ENST00000617429 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
ZNHIT3-204ENST00000617429 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
ZNHIT3-204ENST00000617429 NESP48681 1621 aa15.31■□□□□ 0.04
ZNHIT3-204ENST00000617429 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
ZNHIT3-204ENST00000617429 LAMC3Q9Y6N6 1575 aa15.22■□□□□ 0.03
ZNHIT3-204ENST00000617429 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
ZNHIT3-204ENST00000617429 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
ZNHIT3-204ENST00000617429 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
ZNHIT3-204ENST00000617429 CFTRP13569 1480 aa15.11■□□□□ 0.01
ZNHIT3-204ENST00000617429 PDS5BQ9NTI5 1447 aa15.1■□□□□ 0.01
ZNHIT3-204ENST00000617429 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
ZNHIT3-204ENST00000617429 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
ZNHIT3-204ENST00000617429 THOC2Q8NI27 1593 aaKnown RBP15.02□□□□□ -0.01
ZNHIT3-204ENST00000617429 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
ZNHIT3-204ENST00000617429 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
ZNHIT3-204ENST00000617429 CUX2O14529 1486 aa14.93□□□□□ -0.02
ZNHIT3-204ENST00000617429 WDR62O43379 1518 aa14.9□□□□□ -0.02
ZNHIT3-204ENST00000617429 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
ZNHIT3-204ENST00000617429 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
ZNHIT3-204ENST00000617429 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
ZNHIT3-204ENST00000617429 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
ZNHIT3-204ENST00000617429 CUX1P39880 1505 aa14.75□□□□□ -0.05
ZNHIT3-204ENST00000617429 PHF23Q9BUL5 403 aaPredicted RBP14.72□□□□□ -0.05
ZNHIT3-204ENST00000617429 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
ZNHIT3-204ENST00000617429 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
ZNHIT3-204ENST00000617429 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
ZNHIT3-204ENST00000617429 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
ZNHIT3-204ENST00000617429 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
ZNHIT3-204ENST00000617429 RAD54L2Q9Y4B4 1467 aa14.66□□□□□ -0.06
ZNHIT3-204ENST00000617429 TARBP1Q13395 1621 aaKnown RBP14.65□□□□□ -0.06
ZNHIT3-204ENST00000617429 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
ZNHIT3-204ENST00000617429 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
ZNHIT3-204ENST00000617429 SOGA1O94964 1423 aa14.64□□□□□ -0.07
ZNHIT3-204ENST00000617429 TOP2BQ02880 1626 aa14.63□□□□□ -0.07
ZNHIT3-204ENST00000617429 EIF4G3O43432 1585 aaKnown RBP14.59□□□□□ -0.07
ZNHIT3-204ENST00000617429 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.083e-7■■■□□ 17
ZNHIT3-204ENST00000617429 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.08
ZNHIT3-204ENST00000617429 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
ZNHIT3-204ENST00000617429 WDR97A6NE52 1622 aa14.56□□□□□ -0.08
ZNHIT3-204ENST00000617429 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
ZNHIT3-204ENST00000617429 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
ZNHIT3-204ENST00000617429 GAPVD1Q14C86 1478 aa14.47□□□□□ -0.09
ZNHIT3-204ENST00000617429 ABCA5Q8WWZ7 1642 aa14.47□□□□□ -0.09
ZNHIT3-204ENST00000617429 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
ZNHIT3-204ENST00000617429 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
ZNHIT3-204ENST00000617429 CHD1O14646 1710 aa14.44□□□□□ -0.1
ZNHIT3-204ENST00000617429 FBLN2P98095 1184 aa14.43□□□□□ -0.1
ZNHIT3-204ENST00000617429 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
ZNHIT3-204ENST00000617429 DNAJC5Q9H3Z4 198 aa14.39□□□□□ -0.11
ZNHIT3-204ENST00000617429 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
ZNHIT3-204ENST00000617429 MAGI1Q96QZ7 1491 aaPredicted RBP14.37□□□□□ -0.11
ZNHIT3-204ENST00000617429 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
ZNHIT3-204ENST00000617429 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
ZNHIT3-204ENST00000617429 ERICH3Q5RHP9 1530 aa14.34□□□□□ -0.11
ZNHIT3-204ENST00000617429 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
ZNHIT3-204ENST00000617429 ADAMTS12P58397 1594 aa14.32□□□□□ -0.12
ZNHIT3-204ENST00000617429 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
ZNHIT3-204ENST00000617429 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
ZNHIT3-204ENST00000617429 IGF1RP08069 1367 aa14.28□□□□□ -0.12
ZNHIT3-204ENST00000617429 GRIN2AQ12879 1464 aa14.26□□□□□ -0.13
ZNHIT3-204ENST00000617429 CUL7Q14999 1698 aa14.25□□□□□ -0.13
ZNHIT3-204ENST00000617429 CEP170Q5SW79 1584 aa14.21□□□□□ -0.14
ZNHIT3-204ENST00000617429 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.14
ZNHIT3-204ENST00000617429 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
ZNHIT3-204ENST00000617429 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
ZNHIT3-204ENST00000617429 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
ZNHIT3-204ENST00000617429 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
ZNHIT3-204ENST00000617429 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
ZNHIT3-204ENST00000617429 NUP160Q12769 1436 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms