Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.759e-8■■■■□ 20.6
NCBP2P52298 AC005562.1-202ENST00000398849 1411 ntTSL 27.75□□□□□ -1.171e-11■■■■□ 20.6
NCBP2P52298 C16orf70-210ENST00000569683 905 ntTSL 315.63■□□□□ 0.094e-11■■■■□ 20.6
NCBP2P52298 OBSL1-212ENST00000491370 584 ntTSL 416.83■□□□□ 0.282e-10■■■■□ 20.6
NCBP2P52298 MIB2-215ENST00000502470 780 ntTSL 524.76■■□□□ 1.553e-8■■■■□ 20.6
NCBP2P52298 MIB2-221ENST00000507082 1578 ntTSL 222.8■■□□□ 1.243e-8■■■■□ 20.6
NCBP2P52298 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18■□□□□ 0.473e-8■■■■□ 20.6
NCBP2P52298 MIB2-204ENST00000463492 486 ntTSL 217.92■□□□□ 0.463e-8■■■■□ 20.6
NCBP2P52298 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.83■□□□□ 0.443e-8■■■■□ 20.6
NCBP2P52298 MIB2-213ENST00000487053 3252 ntTSL 517.7■□□□□ 0.423e-8■■■■□ 20.6
NCBP2P52298 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.273e-8■■■■□ 20.6
NCBP2P52298 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.243e-8■■■■□ 20.6
NCBP2P52298 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.183e-8■■■■□ 20.6
NCBP2P52298 MIB2-230ENST00000514363 592 ntTSL 315.84■□□□□ 0.133e-8■■■■□ 20.6
NCBP2P52298 MIB2-210ENST00000479659 4247 ntTSL 215.18■□□□□ 0.023e-8■■■■□ 20.6
NCBP2P52298 MIB2-214ENST00000489635 3034 ntTSL 214.9□□□□□ -0.023e-8■■■■□ 20.6
NCBP2P52298 MIB2-226ENST00000511502 3326 ntTSL 214.51□□□□□ -0.093e-8■■■■□ 20.6
NCBP2P52298 MIB2-209ENST00000477990 2821 ntTSL 213.12□□□□□ -0.313e-8■■■■□ 20.6
NCBP2P52298 RPSA-203ENST00000444512 701 ntTSL 217.78■□□□□ 0.442e-20■■■■□ 20.5
NCBP2P52298 RPSA-208ENST00000487876 572 ntTSL 411.84□□□□□ -0.512e-20■■■■□ 20.5
NCBP2P52298 RPSA-204ENST00000458478 874 ntTSL 210.18□□□□□ -0.782e-20■■■■□ 20.5
NCBP2P52298 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.942e-20■■■■□ 20.5
NCBP2P52298 RPSA-206ENST00000477325 596 ntTSL 28.28□□□□□ -1.082e-20■■■■□ 20.5
NCBP2P52298 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.312e-20■■■■□ 20.5
NCBP2P52298 RPSA-205ENST00000475346 622 ntTSL 1 (best)3.85□□□□□ -1.792e-20■■■■□ 20.5
NCBP2P52298 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.014e-8■■■■□ 20.5
NCBP2P52298 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.7■□□□□ 0.261e-9■■■■□ 20.5
NCBP2P52298 HNF4A-207ENST00000609262 540 ntTSL 1 (best)16.02■□□□□ 0.161e-9■■■■□ 20.5
NCBP2P52298 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC11.51□□□□□ -0.571e-9■■■■□ 20.5
NCBP2P52298 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC10.47□□□□□ -0.731e-9■■■■□ 20.5
NCBP2P52298 UBE2K-207ENST00000513231 871 ntTSL 1 (best)21.94■■□□□ 1.12e-17■■■■□ 20.5
NCBP2P52298 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.712e-17■■■■□ 20.5
NCBP2P52298 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.15■□□□□ 0.52e-17■■■■□ 20.5
NCBP2P52298 UBE2K-206ENST00000510934 589 ntTSL 218.1■□□□□ 0.492e-17■■■■□ 20.5
NCBP2P52298 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.93■□□□□ 0.462e-17■■■■□ 20.5
NCBP2P52298 UBE2K-202ENST00000438068 2262 ntTSL 217.91■□□□□ 0.462e-17■■■■□ 20.5
NCBP2P52298 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.95■□□□□ 0.627e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-213ENST00000526842 535 ntTSL 516.14■□□□□ 0.177e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.127e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.53■□□□□ 0.087e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-221ENST00000534372 544 ntTSL 59.81□□□□□ -0.847e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-219ENST00000531291 572 ntTSL 57.13□□□□□ -1.277e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-216ENST00000528968 587 ntTSL 56.49□□□□□ -1.377e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-220ENST00000532325 526 ntTSL 55.02□□□□□ -1.617e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-217ENST00000529361 555 ntTSL 54.95□□□□□ -1.627e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-204ENST00000448187 888 ntTSL 53.62□□□□□ -1.837e-7■■■■□ 20.5
NCBP2P52298 NAP1L4-202ENST00000399614 594 ntTSL 43.62□□□□□ -1.837e-7■■■■□ 20.5
NCBP2P52298 GMDS-AS1-203ENST00000524770 565 ntTSL 318.52■□□□□ 0.562e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-209ENST00000532124 629 ntTSL 418.52■□□□□ 0.562e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-206ENST00000530346 594 ntTSL 416.63■□□□□ 0.252e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.48■□□□□ 0.232e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-211ENST00000533653 568 ntTSL 215.2■□□□□ 0.022e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.16■□□□□ 0.022e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-208ENST00000531092 744 ntTSL 311.63□□□□□ -0.552e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-214ENST00000534468 724 ntTSL 310.42□□□□□ -0.742e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-207ENST00000530833 724 ntTSL 39.71□□□□□ -0.862e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC8.65□□□□□ -1.022e-8■■■■□ 20.4
NCBP2P52298 GMDS-AS1-204ENST00000525811 539 ntTSL 27.14□□□□□ -1.272e-8■■■■□ 20.4
NCBP2P52298 HES4-203ENST00000481869 1038 ntTSL 226.57■■□□□ 1.847e-11■■■■□ 20.4
NCBP2P52298 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.68■■□□□ 1.227e-11■■■■□ 20.4
NCBP2P52298 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.45■■□□□ 1.187e-11■■■■□ 20.4
NCBP2P52298 NFRKB-204ENST00000526884 568 ntTSL 321.86■■□□□ 1.097e-11■■■■□ 20.4
NCBP2P52298 NFRKB-211ENST00000532225 938 ntTSL 521.25■□□□□ 0.997e-11■■■■□ 20.4
NCBP2P52298 NFRKB-206ENST00000529319 843 ntTSL 321.25■□□□□ 0.997e-11■■■■□ 20.4
NCBP2P52298 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.857e-11■■■■□ 20.4
NCBP2P52298 NFRKB-207ENST00000530278 895 ntTSL 320.18■□□□□ 0.827e-11■■■■□ 20.4
NCBP2P52298 CALCOCO1-204ENST00000546619 549 ntTSL 413.68□□□□□ -0.222e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.262e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-217ENST00000549935 2112 ntTSL 511.87□□□□□ -0.512e-7■■■■□ 20.4
NCBP2P52298 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.518e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-208ENST00000547988 1277 ntTSL 1 (best)10.58□□□□□ -0.722e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.752e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC9.8□□□□□ -0.842e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-222ENST00000553154 566 ntTSL 29.33□□□□□ -0.922e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC9.04□□□□□ -0.962e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-209ENST00000548177 567 ntTSL 48.97□□□□□ -0.972e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-216ENST00000549784 746 ntTSL 48.91□□□□□ -0.982e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-213ENST00000549349 586 ntTSL 48.91□□□□□ -0.982e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-212ENST00000549173 554 ntTSL 48.89□□□□□ -0.992e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-219ENST00000551900 559 ntTSL 48.89□□□□□ -0.992e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-205ENST00000546774 733 ntTSL 27.52□□□□□ -1.212e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-211ENST00000548431 612 ntTSL 26.72□□□□□ -1.332e-7■■■■□ 20.4
NCBP2P52298 CALCOCO1-206ENST00000547885 555 ntTSL 46.45□□□□□ -1.382e-7■■■■□ 20.4
NCBP2P52298 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.089e-10■■■■□ 20.4
NCBP2P52298 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.279e-10■■■■□ 20.4
NCBP2P52298 BCAR1-222ENST00000569340 714 ntTSL 312.24□□□□□ -0.456e-7■■■■□ 20.4
NCBP2P52298 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.275e-15■■■■□ 20.3
NCBP2P52298 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.83□□□□□ -0.362e-9■■■■□ 20.3
NCBP2P52298 RIC8B-210ENST00000550215 534 ntTSL 418.59■□□□□ 0.577e-8■■■■□ 20.3
NCBP2P52298 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.27e-8■■■■□ 20.3
NCBP2P52298 RIC8B-208ENST00000548914 829 ntTSL 515.61■□□□□ 0.097e-8■■■■□ 20.3
NCBP2P52298 RIC8B-212ENST00000552619 419 ntTSL 414.85□□□□□ -0.037e-8■■■■□ 20.3
NCBP2P52298 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.4□□□□□ -0.17e-8■■■■□ 20.3
NCBP2P52298 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.187e-8■■■■□ 20.3
NCBP2P52298 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.6□□□□□ -0.397e-8■■■■□ 20.3
NCBP2P52298 RIC8B-204ENST00000462949 3389 ntTSL 210.33□□□□□ -0.767e-8■■■■□ 20.3
NCBP2P52298 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.911e-8■■■■□ 20.3
NCBP2P52298 CREB1-204ENST00000421139 713 ntTSL 516.02■□□□□ 0.161e-8■■■■□ 20.3
NCBP2P52298 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC10.15□□□□□ -0.781e-8■■■■□ 20.3
NCBP2P52298 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.021e-8■■■■□ 20.3
Retrieved 100 of 18,329 protein–RNA pairs in 402.3 ms