RNA–Protein interactions for RNA: ENST00000546774.1

CALCOCO1-205, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-205ENST00000546774 NISCHQ9Y2I1 1504 aa20.24■□□□□ 0.83
CALCOCO1-205ENST00000546774 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
CALCOCO1-205ENST00000546774 ABCC9O60706 1549 aa17.88■□□□□ 0.45
CALCOCO1-205ENST00000546774 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
CALCOCO1-205ENST00000546774 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
CALCOCO1-205ENST00000546774 NACADO15069 1562 aa17.03■□□□□ 0.32
CALCOCO1-205ENST00000546774 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
CALCOCO1-205ENST00000546774 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
CALCOCO1-205ENST00000546774 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
CALCOCO1-205ENST00000546774 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
CALCOCO1-205ENST00000546774 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
CALCOCO1-205ENST00000546774 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
CALCOCO1-205ENST00000546774 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
CALCOCO1-205ENST00000546774 SCRIBQ14160 1630 aa16.51■□□□□ 0.23
CALCOCO1-205ENST00000546774 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
CALCOCO1-205ENST00000546774 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
CALCOCO1-205ENST00000546774 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
CALCOCO1-205ENST00000546774 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
CALCOCO1-205ENST00000546774 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
CALCOCO1-205ENST00000546774 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
CALCOCO1-205ENST00000546774 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
CALCOCO1-205ENST00000546774 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
CALCOCO1-205ENST00000546774 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.1
CALCOCO1-205ENST00000546774 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO1-205ENST00000546774 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
CALCOCO1-205ENST00000546774 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
CALCOCO1-205ENST00000546774 HMGXB3Q12766 1538 aa15.61■□□□□ 0.09
CALCOCO1-205ENST00000546774 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.08
CALCOCO1-205ENST00000546774 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
CALCOCO1-205ENST00000546774 WIZO95785 1651 aa15.48■□□□□ 0.07
CALCOCO1-205ENST00000546774 NESP48681 1621 aa15.43■□□□□ 0.06
CALCOCO1-205ENST00000546774 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
CALCOCO1-205ENST00000546774 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
CALCOCO1-205ENST00000546774 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
CALCOCO1-205ENST00000546774 CUX2O14529 1486 aa15.3■□□□□ 0.04
CALCOCO1-205ENST00000546774 KIF21AQ7Z4S6 1674 aa15.27■□□□□ 0.03
CALCOCO1-205ENST00000546774 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
CALCOCO1-205ENST00000546774 TOP2AP11388 1531 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-205ENST00000546774 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
CALCOCO1-205ENST00000546774 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
CALCOCO1-205ENST00000546774 CFTRP13569 1480 aa15.12■□□□□ 0.01
CALCOCO1-205ENST00000546774 CCDC88BA6NC98 1476 aa15.08■□□□□ 0.01
CALCOCO1-205ENST00000546774 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
CALCOCO1-205ENST00000546774 MRC2Q9UBG0 1479 aa15.08■□□□□ 0.01
CALCOCO1-205ENST00000546774 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
CALCOCO1-205ENST00000546774 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
CALCOCO1-205ENST00000546774 PRDM2Q13029 1718 aa15.06■□□□□ 0
CALCOCO1-205ENST00000546774 WDR62O43379 1518 aa15.04■□□□□ -0
CALCOCO1-205ENST00000546774 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
CALCOCO1-205ENST00000546774 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
CALCOCO1-205ENST00000546774 TOPBP1Q92547 1522 aa14.83□□□□□ -0.04
CALCOCO1-205ENST00000546774 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
CALCOCO1-205ENST00000546774 DNMBPQ6XZF7 1577 aa14.79□□□□□ -0.04
CALCOCO1-205ENST00000546774 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
CALCOCO1-205ENST00000546774 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
CALCOCO1-205ENST00000546774 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
CALCOCO1-205ENST00000546774 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
CALCOCO1-205ENST00000546774 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
CALCOCO1-205ENST00000546774 EIF4G3O43432 1585 aaKnown RBP14.67□□□□□ -0.06
CALCOCO1-205ENST00000546774 CUX1P39880 1505 aa14.66□□□□□ -0.06
CALCOCO1-205ENST00000546774 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
CALCOCO1-205ENST00000546774 SOGA1O94964 1423 aa14.64□□□□□ -0.07
CALCOCO1-205ENST00000546774 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.073e-6■■■■□ 24.7
CALCOCO1-205ENST00000546774 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
CALCOCO1-205ENST00000546774 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
CALCOCO1-205ENST00000546774 CHD1O14646 1710 aa14.57□□□□□ -0.08
CALCOCO1-205ENST00000546774 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
CALCOCO1-205ENST00000546774 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
CALCOCO1-205ENST00000546774 FBLN2P98095 1184 aa14.52□□□□□ -0.09
CALCOCO1-205ENST00000546774 BIVM-ERCC5R4GMW8 1640 aa14.49□□□□□ -0.09
CALCOCO1-205ENST00000546774 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
CALCOCO1-205ENST00000546774 SNAPC4Q5SXM2 1469 aa14.48□□□□□ -0.09
CALCOCO1-205ENST00000546774 PBRM1Q86U86 1689 aa14.48□□□□□ -0.09
CALCOCO1-205ENST00000546774 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
CALCOCO1-205ENST00000546774 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
CALCOCO1-205ENST00000546774 GRIN2BQ13224 1484 aa14.47□□□□□ -0.09
CALCOCO1-205ENST00000546774 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
CALCOCO1-205ENST00000546774 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
CALCOCO1-205ENST00000546774 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
CALCOCO1-205ENST00000546774 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.09
CALCOCO1-205ENST00000546774 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
CALCOCO1-205ENST00000546774 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
CALCOCO1-205ENST00000546774 CHMP7Q8WUX9 453 aaPredicted RBP14.44□□□□□ -0.1
CALCOCO1-205ENST00000546774 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
CALCOCO1-205ENST00000546774 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
CALCOCO1-205ENST00000546774 SYNJ2O15056 1496 aa14.39□□□□□ -0.11
CALCOCO1-205ENST00000546774 CLASP1Q7Z460 1538 aa14.34□□□□□ -0.11
CALCOCO1-205ENST00000546774 CYB5RLQ6IPT4 315 aa14.33□□□□□ -0.12
CALCOCO1-205ENST00000546774 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
CALCOCO1-205ENST00000546774 ERICH3Q5RHP9 1530 aa14.29□□□□□ -0.12
CALCOCO1-205ENST00000546774 GRIN2AQ12879 1464 aa14.28□□□□□ -0.12
CALCOCO1-205ENST00000546774 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
CALCOCO1-205ENST00000546774 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
CALCOCO1-205ENST00000546774 CEP170Q5SW79 1584 aa14.23□□□□□ -0.13
CALCOCO1-205ENST00000546774 NUP160Q12769 1436 aa14.21□□□□□ -0.13
CALCOCO1-205ENST00000546774 KIF27Q86VH2 1401 aa14.19□□□□□ -0.14
CALCOCO1-205ENST00000546774 IGF1RP08069 1367 aa14.18□□□□□ -0.14
CALCOCO1-205ENST00000546774 PHF23Q9BUL5 403 aaPredicted RBP14.17□□□□□ -0.14
CALCOCO1-205ENST00000546774 ERCC6L2Q5T890 1561 aa14.17□□□□□ -0.14
CALCOCO1-205ENST00000546774 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 321 ms