RNA–Protein interactions for RNA: ENST00000444512.2

RPSA-203, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-203ENST00000444512 NISCHQ9Y2I1 1504 aa45.65■■■■■ 4.9
RPSA-203ENST00000444512 CCDC180Q9P1Z9 1646 aa40.42■■■■■ 4.06
RPSA-203ENST00000444512 ABCC9O60706 1549 aa39.05■■■■□ 3.84
RPSA-203ENST00000444512 ZCCHC6Q5VYS8 1495 aaKnown RBP38.15■■■■□ 3.7
RPSA-203ENST00000444512 NACADO15069 1562 aa37.85■■■■□ 3.65
RPSA-203ENST00000444512 DCAF8L2P0C7V8 631 aa37.84■■■■□ 3.65
RPSA-203ENST00000444512 DCAF1Q9Y4B6 1507 aa37.81■■■■□ 3.64
RPSA-203ENST00000444512 MYO15BQ96JP2 1530 aa37.79■■■■□ 3.64
RPSA-203ENST00000444512 RB1CC1Q8TDY2 1594 aa37.79■■■■□ 3.64
RPSA-203ENST00000444512 UNC13AQ9UPW8 1703 aa36.96■■■■□ 3.51
RPSA-203ENST00000444512 SCRIBQ14160 1630 aa36.9■■■■□ 3.5
RPSA-203ENST00000444512 BICRAQ9NZM4 1560 aa36.65■■■■□ 3.46
RPSA-203ENST00000444512 PABPN1Q86U42 306 aaKnown RBP eCLIP36.53■■■■□ 3.44
RPSA-203ENST00000444512 SHROOM4Q9ULL8 1493 aa36.31■■■■□ 3.4
RPSA-203ENST00000444512 EIF4G1Q04637 1599 aaKnown RBP35.64■■■■□ 3.3
RPSA-203ENST00000444512 CECR2Q9BXF3 1484 aa35.5■■■■□ 3.27
RPSA-203ENST00000444512 DNAJC5BQ9UF47 199 aa35.38■■■■□ 3.25
RPSA-203ENST00000444512 CC2D2AQ9P2K1 1620 aa35.36■■■■□ 3.25
RPSA-203ENST00000444512 BAZ1AQ9NRL2 1556 aaPredicted RBP35.36■■■■□ 3.25
RPSA-203ENST00000444512 SMARCA4P51532 1647 aa35.35■■■■□ 3.25
RPSA-203ENST00000444512 MROH2BQ7Z745 1585 aa35.2■■■■□ 3.23
RPSA-203ENST00000444512 ATAD2BQ9ULI0 1458 aa35.01■■■■□ 3.19
RPSA-203ENST00000444512 SMARCA2P51531 1590 aa35■■■■□ 3.19
RPSA-203ENST00000444512 PEG3Q9GZU2 1588 aa35■■■■□ 3.19
RPSA-203ENST00000444512 RSF1Q96T23 1441 aaPredicted RBP34.94■■■■□ 3.18
RPSA-203ENST00000444512 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
RPSA-203ENST00000444512 WIZO95785 1651 aa34.85■■■■□ 3.17
RPSA-203ENST00000444512 HMGXB3Q12766 1538 aa34.82■■■■□ 3.16
RPSA-203ENST00000444512 BAZ1BQ9UIG0 1483 aaKnown RBP34.75■■■■□ 3.15
RPSA-203ENST00000444512 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.12
RPSA-203ENST00000444512 SUPT5HO00267 1087 aaKnown RBP34.34■■■■□ 3.09
RPSA-203ENST00000444512 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.05
RPSA-203ENST00000444512 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
RPSA-203ENST00000444512 NESP48681 1621 aa33.94■■■■□ 3.02
RPSA-203ENST00000444512 CADPSQ9ULU8 1353 aa33.9■■■■□ 3.02
RPSA-203ENST00000444512 CFTRP13569 1480 aa33.82■■■■□ 3.01
RPSA-203ENST00000444512 PRDM2Q13029 1718 aa33.65■■■□□ 2.98
RPSA-203ENST00000444512 PDS5BQ9NTI5 1447 aa33.65■■■□□ 2.98
RPSA-203ENST00000444512 ERCC6Q03468 1493 aa33.62■■■□□ 2.97
RPSA-203ENST00000444512 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
RPSA-203ENST00000444512 FANCD2Q9BXW9 1451 aa33.54■■■□□ 2.96
RPSA-203ENST00000444512 CEP164Q9UPV0 1460 aa33.46■■■□□ 2.95
RPSA-203ENST00000444512 THOC2Q8NI27 1593 aaKnown RBP33.37■■■□□ 2.93
RPSA-203ENST00000444512 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
RPSA-203ENST00000444512 WDR62O43379 1518 aa33.21■■■□□ 2.91
RPSA-203ENST00000444512 URB2Q14146 1524 aaKnown RBP33.19■■■□□ 2.9
RPSA-203ENST00000444512 CUX2O14529 1486 aa33.12■■■□□ 2.89
RPSA-203ENST00000444512 DNMBPQ6XZF7 1577 aa33.09■■■□□ 2.89
RPSA-203ENST00000444512 ABCC8Q09428 1581 aa33.06■■■□□ 2.88
RPSA-203ENST00000444512 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
RPSA-203ENST00000444512 CUX1P39880 1505 aa33■■■□□ 2.87
RPSA-203ENST00000444512 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
RPSA-203ENST00000444512 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
RPSA-203ENST00000444512 BIVM-ERCC5R4GMW8 1640 aa32.85■■■□□ 2.85
RPSA-203ENST00000444512 TOP2BQ02880 1626 aa32.84■■■□□ 2.85
RPSA-203ENST00000444512 POLA1P09884 1462 aaPredicted RBP32.81■■■□□ 2.84
RPSA-203ENST00000444512 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
RPSA-203ENST00000444512 IFT140Q96RY7 1462 aa32.73■■■□□ 2.83
RPSA-203ENST00000444512 TARBP1Q13395 1621 aaKnown RBP32.69■■■□□ 2.82
RPSA-203ENST00000444512 SOGA1O94964 1423 aa32.65■■■□□ 2.82
RPSA-203ENST00000444512 RAD54L2Q9Y4B4 1467 aa32.65■■■□□ 2.82
RPSA-203ENST00000444512 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
RPSA-203ENST00000444512 ZNF608Q9ULD9 1512 aaPredicted RBP32.55■■■□□ 2.8
RPSA-203ENST00000444512 ABCA10Q8WWZ4 1543 aa32.51■■■□□ 2.79
RPSA-203ENST00000444512 EIF4G3O43432 1585 aaKnown RBP32.48■■■□□ 2.79
RPSA-203ENST00000444512 TRIM41Q8WV44 630 aa32.41■■■□□ 2.78
RPSA-203ENST00000444512 TDRD9Q8NDG6 1382 aaKnown RBP32.41■■■□□ 2.78
RPSA-203ENST00000444512 AQRO60306 1485 aaKnown RBP eCLIP32.4■■■□□ 2.78not detected■■■■■ 39.4
RPSA-203ENST00000444512 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
RPSA-203ENST00000444512 CHIC1Q5VXU3 224 aa32.34■■■□□ 2.77
RPSA-203ENST00000444512 GAPVD1Q14C86 1478 aa32.3■■■□□ 2.76
RPSA-203ENST00000444512 PBRM1Q86U86 1689 aa32.25■■■□□ 2.75
RPSA-203ENST00000444512 GRIN2BQ13224 1484 aa32.24■■■□□ 2.75
RPSA-203ENST00000444512 KIF27Q86VH2 1401 aa32.19■■■□□ 2.74
RPSA-203ENST00000444512 SNAPC4Q5SXM2 1469 aa32.15■■■□□ 2.74
RPSA-203ENST00000444512 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
RPSA-203ENST00000444512 MAGI1Q96QZ7 1491 aaPredicted RBP32.11■■■□□ 2.73
RPSA-203ENST00000444512 RUSC2Q8N2Y8 1516 aa32.05■■■□□ 2.72
RPSA-203ENST00000444512 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
RPSA-203ENST00000444512 IGF1RP08069 1367 aa31.99■■■□□ 2.71
RPSA-203ENST00000444512 SYNJ2O15056 1496 aa31.98■■■□□ 2.71
RPSA-203ENST00000444512 CHD1O14646 1710 aa31.97■■■□□ 2.71
RPSA-203ENST00000444512 CUL7Q14999 1698 aa31.95■■■□□ 2.7
RPSA-203ENST00000444512 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
RPSA-203ENST00000444512 EEA1Q15075 1411 aa31.9■■■□□ 2.7
RPSA-203ENST00000444512 FBLN2P98095 1184 aa31.87■■■□□ 2.69
RPSA-203ENST00000444512 CHMP7Q8WUX9 453 aaPredicted RBP31.86■■■□□ 2.69
RPSA-203ENST00000444512 GRIN2AQ12879 1464 aa31.84■■■□□ 2.69
RPSA-203ENST00000444512 CARMIL1Q5VZK9 1371 aa31.81■■■□□ 2.68
RPSA-203ENST00000444512 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
RPSA-203ENST00000444512 CSRNP3Q8WYN3 585 aa31.74■■■□□ 2.67
RPSA-203ENST00000444512 FAM9AQ8IZU1 332 aaPredicted RBP31.73■■■□□ 2.67
RPSA-203ENST00000444512 PRXQ9BXM0 1461 aa31.72■■■□□ 2.67
RPSA-203ENST00000444512 RAPGEF2Q9Y4G8 1499 aa31.7■■■□□ 2.66
RPSA-203ENST00000444512 CEP170Q5SW79 1584 aa31.68■■■□□ 2.66
RPSA-203ENST00000444512 NUP160Q12769 1436 aa31.67■■■□□ 2.66
RPSA-203ENST00000444512 CLASP1Q7Z460 1538 aa31.64■■■□□ 2.66
RPSA-203ENST00000444512 DNAJC5Q9H3Z4 198 aa31.58■■■□□ 2.65
RPSA-203ENST00000444512 KIF21BO75037 1637 aa31.57■■■□□ 2.64
RPSA-203ENST00000444512 KIAA0586Q9BVV6 1533 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms