RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
CALCOCO1-222ENST00000553154 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
CALCOCO1-222ENST00000553154 ABCC9O60706 1549 aa21.44■■□□□ 1.02
CALCOCO1-222ENST00000553154 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
CALCOCO1-222ENST00000553154 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
CALCOCO1-222ENST00000553154 NACADO15069 1562 aa20.71■□□□□ 0.91
CALCOCO1-222ENST00000553154 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
CALCOCO1-222ENST00000553154 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
CALCOCO1-222ENST00000553154 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
CALCOCO1-222ENST00000553154 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
CALCOCO1-222ENST00000553154 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
CALCOCO1-222ENST00000553154 BICRAQ9NZM4 1560 aa20.16■□□□□ 0.82
CALCOCO1-222ENST00000553154 SCRIBQ14160 1630 aa20.06■□□□□ 0.8
CALCOCO1-222ENST00000553154 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
CALCOCO1-222ENST00000553154 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
CALCOCO1-222ENST00000553154 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
CALCOCO1-222ENST00000553154 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
CALCOCO1-222ENST00000553154 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
CALCOCO1-222ENST00000553154 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
CALCOCO1-222ENST00000553154 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
CALCOCO1-222ENST00000553154 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
CALCOCO1-222ENST00000553154 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
CALCOCO1-222ENST00000553154 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
CALCOCO1-222ENST00000553154 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
CALCOCO1-222ENST00000553154 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
CALCOCO1-222ENST00000553154 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
CALCOCO1-222ENST00000553154 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
CALCOCO1-222ENST00000553154 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
CALCOCO1-222ENST00000553154 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
CALCOCO1-222ENST00000553154 WIZO95785 1651 aa18.89■□□□□ 0.61
CALCOCO1-222ENST00000553154 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
CALCOCO1-222ENST00000553154 NESP48681 1621 aa18.61■□□□□ 0.57
CALCOCO1-222ENST00000553154 LAMC3Q9Y6N6 1575 aa18.58■□□□□ 0.56
CALCOCO1-222ENST00000553154 CADPSQ9ULU8 1353 aa18.54■□□□□ 0.56
CALCOCO1-222ENST00000553154 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
CALCOCO1-222ENST00000553154 CFTRP13569 1480 aa18.49■□□□□ 0.55
CALCOCO1-222ENST00000553154 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
CALCOCO1-222ENST00000553154 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
CALCOCO1-222ENST00000553154 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
CALCOCO1-222ENST00000553154 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
CALCOCO1-222ENST00000553154 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
CALCOCO1-222ENST00000553154 CUX2O14529 1486 aa18.31■□□□□ 0.52
CALCOCO1-222ENST00000553154 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
CALCOCO1-222ENST00000553154 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
CALCOCO1-222ENST00000553154 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
CALCOCO1-222ENST00000553154 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
CALCOCO1-222ENST00000553154 WDR62O43379 1518 aa18.25■□□□□ 0.51
CALCOCO1-222ENST00000553154 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
CALCOCO1-222ENST00000553154 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
CALCOCO1-222ENST00000553154 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
CALCOCO1-222ENST00000553154 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
CALCOCO1-222ENST00000553154 ABCC8Q09428 1581 aa18.01■□□□□ 0.47
CALCOCO1-222ENST00000553154 CUX1P39880 1505 aa17.97■□□□□ 0.47
CALCOCO1-222ENST00000553154 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
CALCOCO1-222ENST00000553154 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
CALCOCO1-222ENST00000553154 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
CALCOCO1-222ENST00000553154 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
CALCOCO1-222ENST00000553154 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
CALCOCO1-222ENST00000553154 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
CALCOCO1-222ENST00000553154 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
CALCOCO1-222ENST00000553154 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
CALCOCO1-222ENST00000553154 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
CALCOCO1-222ENST00000553154 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
CALCOCO1-222ENST00000553154 SOGA1O94964 1423 aa17.77■□□□□ 0.44
CALCOCO1-222ENST00000553154 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
CALCOCO1-222ENST00000553154 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
CALCOCO1-222ENST00000553154 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
CALCOCO1-222ENST00000553154 AQRO60306 1485 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■■■■ 31.2
CALCOCO1-222ENST00000553154 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
CALCOCO1-222ENST00000553154 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
CALCOCO1-222ENST00000553154 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
CALCOCO1-222ENST00000553154 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
CALCOCO1-222ENST00000553154 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
CALCOCO1-222ENST00000553154 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
CALCOCO1-222ENST00000553154 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
CALCOCO1-222ENST00000553154 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
CALCOCO1-222ENST00000553154 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
CALCOCO1-222ENST00000553154 ADAMTS12P58397 1594 aa17.48■□□□□ 0.39
CALCOCO1-222ENST00000553154 CHD1O14646 1710 aa17.47■□□□□ 0.39
CALCOCO1-222ENST00000553154 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
CALCOCO1-222ENST00000553154 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
CALCOCO1-222ENST00000553154 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
CALCOCO1-222ENST00000553154 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
CALCOCO1-222ENST00000553154 IGF1RP08069 1367 aa17.39■□□□□ 0.37
CALCOCO1-222ENST00000553154 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
CALCOCO1-222ENST00000553154 NUP160Q12769 1436 aa17.36■□□□□ 0.37
CALCOCO1-222ENST00000553154 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.37
CALCOCO1-222ENST00000553154 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
CALCOCO1-222ENST00000553154 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
CALCOCO1-222ENST00000553154 FBLN2P98095 1184 aa17.31■□□□□ 0.36
CALCOCO1-222ENST00000553154 CUL7Q14999 1698 aa17.31■□□□□ 0.36
CALCOCO1-222ENST00000553154 ARHGEF11O15085 1522 aa17.27■□□□□ 0.36
CALCOCO1-222ENST00000553154 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
CALCOCO1-222ENST00000553154 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
CALCOCO1-222ENST00000553154 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
CALCOCO1-222ENST00000553154 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
CALCOCO1-222ENST00000553154 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
CALCOCO1-222ENST00000553154 SHROOM2Q13796 1616 aa17.22■□□□□ 0.35
CALCOCO1-222ENST00000553154 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
CALCOCO1-222ENST00000553154 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms