RNA–Protein interactions for RNA: ENST00000304952.10

HES4-201, Transcript of hes family bHLH transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HES4, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HES4-201ENST00000304952 NISCHQ9Y2I1 1504 aa56.04■■■■■ 6.56
HES4-201ENST00000304952 CCDC180Q9P1Z9 1646 aa50.19■■■■■ 5.63
HES4-201ENST00000304952 ABCC9O60706 1549 aa50.11■■■■■ 5.61
HES4-201ENST00000304952 RB1CC1Q8TDY2 1594 aa47.75■■■■■ 5.23
HES4-201ENST00000304952 NACADO15069 1562 aa47.45■■■■■ 5.19
HES4-201ENST00000304952 DCAF8L2P0C7V8 631 aa47.34■■■■■ 5.17
HES4-201ENST00000304952 DNAJC5BQ9UF47 199 aa46.91■■■■■ 5.1
HES4-201ENST00000304952 MYO15BQ96JP2 1530 aa46.84■■■■■ 5.09
HES4-201ENST00000304952 PABPN1Q86U42 306 aaKnown RBP eCLIP46.71■■■■■ 5.07
HES4-201ENST00000304952 UNC13AQ9UPW8 1703 aa46.62■■■■■ 5.05
HES4-201ENST00000304952 ZCCHC6Q5VYS8 1495 aaKnown RBP46.45■■■■■ 5.03
HES4-201ENST00000304952 BICRAQ9NZM4 1560 aa46.33■■■■■ 5.01
HES4-201ENST00000304952 DCAF1Q9Y4B6 1507 aa46.29■■■■■ 5
HES4-201ENST00000304952 SCRIBQ14160 1630 aa45.76■■■■■ 4.92
HES4-201ENST00000304952 SHROOM4Q9ULL8 1493 aa45.73■■■■■ 4.91
HES4-201ENST00000304952 CC2D2AQ9P2K1 1620 aa45.25■■■■■ 4.83
HES4-201ENST00000304952 EIF4G1Q04637 1599 aaKnown RBP45.19■■■■■ 4.82
HES4-201ENST00000304952 CECR2Q9BXF3 1484 aa45.12■■■■■ 4.81
HES4-201ENST00000304952 NCAPD3P42695 1498 aa43.83■■■■■ 4.61
HES4-201ENST00000304952 ATAD2BQ9ULI0 1458 aa43.7■■■■■ 4.59
HES4-201ENST00000304952 SMARCA4P51532 1647 aa43.67■■■■■ 4.58
HES4-201ENST00000304952 SMARCA2P51531 1590 aa43.58■■■■■ 4.57
HES4-201ENST00000304952 BAZ1AQ9NRL2 1556 aaPredicted RBP43.49■■■■■ 4.55
HES4-201ENST00000304952 HMGXB3Q12766 1538 aa43.48■■■■■ 4.55
HES4-201ENST00000304952 BAZ1BQ9UIG0 1483 aaKnown RBP43.29■■■■■ 4.52
HES4-201ENST00000304952 ERCC6Q03468 1493 aa43.26■■■■■ 4.52
HES4-201ENST00000304952 PEG3Q9GZU2 1588 aa43.24■■■■■ 4.51
HES4-201ENST00000304952 MROH2BQ7Z745 1585 aa43.18■■■■■ 4.5
HES4-201ENST00000304952 CUX2O14529 1486 aa43.13■■■■■ 4.49
HES4-201ENST00000304952 NESP48681 1621 aa43.08■■■■■ 4.49
HES4-201ENST00000304952 DNAJC5Q9H3Z4 198 aa42.99■■■■■ 4.47
HES4-201ENST00000304952 LAMC3Q9Y6N6 1575 aa42.8■■■■■ 4.44
HES4-201ENST00000304952 WIZO95785 1651 aa42.66■■■■■ 4.42
HES4-201ENST00000304952 PDS5BQ9NTI5 1447 aa42.58■■■■■ 4.41
HES4-201ENST00000304952 THOC2Q8NI27 1593 aaKnown RBP42.57■■■■■ 4.41
HES4-201ENST00000304952 CADPSQ9ULU8 1353 aa42.52■■■■■ 4.4
HES4-201ENST00000304952 KIF21AQ7Z4S6 1674 aa42.5■■■■■ 4.39
HES4-201ENST00000304952 RSF1Q96T23 1441 aaPredicted RBP42.35■■■■■ 4.37
HES4-201ENST00000304952 MRC2Q9UBG0 1479 aa42.17■■■■■ 4.34
HES4-201ENST00000304952 TOP2AP11388 1531 aaKnown RBP42.13■■■■■ 4.33
HES4-201ENST00000304952 WDR62O43379 1518 aa42.05■■■■■ 4.32
HES4-201ENST00000304952 CFTRP13569 1480 aa42.04■■■■■ 4.32
HES4-201ENST00000304952 CEP164Q9UPV0 1460 aa42.04■■■■■ 4.32
HES4-201ENST00000304952 FANCD2Q9BXW9 1451 aa42.01■■■■■ 4.32
HES4-201ENST00000304952 CCDC88BA6NC98 1476 aa41.68■■■■■ 4.26
HES4-201ENST00000304952 URB2Q14146 1524 aaKnown RBP41.64■■■■■ 4.26
HES4-201ENST00000304952 PRDM2Q13029 1718 aa41.58■■■■■ 4.25
HES4-201ENST00000304952 OSCARQ8IYS5 282 aa41.24■■■■■ 4.19
HES4-201ENST00000304952 TOPBP1Q92547 1522 aa41.23■■■■■ 4.19
HES4-201ENST00000304952 IFT140Q96RY7 1462 aa41.21■■■■■ 4.19
HES4-201ENST00000304952 TRIM41Q8WV44 630 aa41.18■■■■■ 4.18
HES4-201ENST00000304952 ABCC8Q09428 1581 aa41.17■■■■■ 4.18
HES4-201ENST00000304952 ZNF608Q9ULD9 1512 aaPredicted RBP41.11■■■■■ 4.17
HES4-201ENST00000304952 DNMBPQ6XZF7 1577 aa41.08■■■■■ 4.17
HES4-201ENST00000304952 EIF4G3O43432 1585 aaKnown RBP40.86■■■■■ 4.13
HES4-201ENST00000304952 TARBP1Q13395 1621 aaKnown RBP40.83■■■■■ 4.13
HES4-201ENST00000304952 POLA1P09884 1462 aaPredicted RBP40.81■■■■■ 4.12
HES4-201ENST00000304952 AQRO60306 1485 aaKnown RBP eCLIP40.78■■■■■ 4.126e-6■□□□□ 8.5
HES4-201ENST00000304952 RAD54L2Q9Y4B4 1467 aa40.67■■■■■ 4.1
HES4-201ENST00000304952 SOGA1O94964 1423 aa40.67■■■■■ 4.1
HES4-201ENST00000304952 SUPT5HO00267 1087 aaKnown RBP40.64■■■■■ 4.1
HES4-201ENST00000304952 RIMBP3CA6NJZ7 1639 aa40.62■■■■■ 4.09
HES4-201ENST00000304952 RIMBP3BA6NNM3 1639 aa40.62■■■■■ 4.09
HES4-201ENST00000304952 RIMBP3Q9UFD9 1639 aa40.62■■■■■ 4.09
HES4-201ENST00000304952 FGD5Q6ZNL6 1462 aa40.58■■■■■ 4.09
HES4-201ENST00000304952 TDRD9Q8NDG6 1382 aaKnown RBP40.57■■■■■ 4.08
HES4-201ENST00000304952 CUX1P39880 1505 aa40.56■■■■■ 4.08
HES4-201ENST00000304952 FBLN2P98095 1184 aa40.54■■■■■ 4.08
HES4-201ENST00000304952 CHD1O14646 1710 aa40.53■■■■■ 4.08
HES4-201ENST00000304952 ARHGEF11O15085 1522 aa40.51■■■■■ 4.08
HES4-201ENST00000304952 WDR97A6NE52 1622 aa40.43■■■■■ 4.06
HES4-201ENST00000304952 SNAPC4Q5SXM2 1469 aa40.35■■■■■ 4.05
HES4-201ENST00000304952 GRIN2BQ13224 1484 aa40.28■■■■■ 4.04
HES4-201ENST00000304952 CYB5RLQ6IPT4 315 aa40.27■■■■■ 4.04
HES4-201ENST00000304952 CHMP7Q8WUX9 453 aaPredicted RBP40.26■■■■■ 4.04
HES4-201ENST00000304952 MAGI1Q96QZ7 1491 aaPredicted RBP40.26■■■■■ 4.03
HES4-201ENST00000304952 GAPVD1Q14C86 1478 aa40.16■■■■■ 4.02
HES4-201ENST00000304952 SYNJ2O15056 1496 aa40.13■■■■■ 4.01
HES4-201ENST00000304952 ABCA10Q8WWZ4 1543 aa40.12■■■■■ 4.01
HES4-201ENST00000304952 ARAP1Q96P48 1450 aa40.12■■■■■ 4.01
HES4-201ENST00000304952 SYNJ1O43426 1573 aa40.1■■■■■ 4.01
HES4-201ENST00000304952 PBRM1Q86U86 1689 aa40.08■■■■■ 4.01
HES4-201ENST00000304952 CLASP1Q7Z460 1538 aa40.08■■■■■ 4.01
HES4-201ENST00000304952 ABCA5Q8WWZ7 1642 aa40.02■■■■■ 4
HES4-201ENST00000304952 WRNQ14191 1432 aaPredicted RBP eCLIP40.02■■■■■ 4
HES4-201ENST00000304952 TOP2BQ02880 1626 aa39.94■■■■□ 3.99
HES4-201ENST00000304952 BIVM-ERCC5R4GMW8 1640 aa39.93■■■■□ 3.98
HES4-201ENST00000304952 TRHP20396 242 aaPredicted RBP39.8■■■■□ 3.96
HES4-201ENST00000304952 GRIN2AQ12879 1464 aa39.75■■■■□ 3.95
HES4-201ENST00000304952 ADAMTS12P58397 1594 aa39.72■■■■□ 3.95
HES4-201ENST00000304952 FHAD1B1AJZ9 1412 aa39.65■■■■□ 3.94
HES4-201ENST00000304952 ERICH3Q5RHP9 1530 aa39.63■■■■□ 3.93
HES4-201ENST00000304952 NUP160Q12769 1436 aa39.6■■■■□ 3.93
HES4-201ENST00000304952 CEP170Q5SW79 1584 aa39.58■■■■□ 3.93
HES4-201ENST00000304952 ERCC6L2Q5T890 1561 aa39.47■■■■□ 3.91
HES4-201ENST00000304952 SHROOM2Q13796 1616 aa39.4■■■■□ 3.9
HES4-201ENST00000304952 JPH4Q96JJ6 628 aa39.27■■■■□ 3.88
HES4-201ENST00000304952 PRG4Q92954 1404 aaPredicted RBP39.24■■■■□ 3.87
HES4-201ENST00000304952 KIF27Q86VH2 1401 aa39.21■■■■□ 3.87
HES4-201ENST00000304952 IGF1RP08069 1367 aa39.19■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms