RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
CALCOCO1-211ENST00000548431 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
CALCOCO1-211ENST00000548431 ABCC9O60706 1549 aa14.21□□□□□ -0.13
CALCOCO1-211ENST00000548431 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
CALCOCO1-211ENST00000548431 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
CALCOCO1-211ENST00000548431 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
CALCOCO1-211ENST00000548431 NACADO15069 1562 aa13.81□□□□□ -0.2
CALCOCO1-211ENST00000548431 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
CALCOCO1-211ENST00000548431 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
CALCOCO1-211ENST00000548431 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
CALCOCO1-211ENST00000548431 SCRIBQ14160 1630 aa13.52□□□□□ -0.25
CALCOCO1-211ENST00000548431 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
CALCOCO1-211ENST00000548431 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
CALCOCO1-211ENST00000548431 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
CALCOCO1-211ENST00000548431 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
CALCOCO1-211ENST00000548431 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO1-211ENST00000548431 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
CALCOCO1-211ENST00000548431 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
CALCOCO1-211ENST00000548431 CECR2Q9BXF3 1484 aa12.88□□□□□ -0.35
CALCOCO1-211ENST00000548431 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
CALCOCO1-211ENST00000548431 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
CALCOCO1-211ENST00000548431 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
CALCOCO1-211ENST00000548431 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
CALCOCO1-211ENST00000548431 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
CALCOCO1-211ENST00000548431 WIZO95785 1651 aa12.74□□□□□ -0.37
CALCOCO1-211ENST00000548431 HMGXB3Q12766 1538 aa12.74□□□□□ -0.37
CALCOCO1-211ENST00000548431 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
CALCOCO1-211ENST00000548431 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
CALCOCO1-211ENST00000548431 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
CALCOCO1-211ENST00000548431 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
CALCOCO1-211ENST00000548431 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
CALCOCO1-211ENST00000548431 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
CALCOCO1-211ENST00000548431 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
CALCOCO1-211ENST00000548431 KIF21AQ7Z4S6 1674 aa12.42□□□□□ -0.42
CALCOCO1-211ENST00000548431 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
CALCOCO1-211ENST00000548431 NESP48681 1621 aa12.38□□□□□ -0.43
CALCOCO1-211ENST00000548431 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
CALCOCO1-211ENST00000548431 CADPSQ9ULU8 1353 aa12.33□□□□□ -0.44
CALCOCO1-211ENST00000548431 CFTRP13569 1480 aa12.33□□□□□ -0.44
CALCOCO1-211ENST00000548431 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
CALCOCO1-211ENST00000548431 ERCC6Q03468 1493 aa12.21□□□□□ -0.46
CALCOCO1-211ENST00000548431 FANCD2Q9BXW9 1451 aa12.19□□□□□ -0.46
CALCOCO1-211ENST00000548431 WDR62O43379 1518 aa12.17□□□□□ -0.46
CALCOCO1-211ENST00000548431 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
CALCOCO1-211ENST00000548431 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
CALCOCO1-211ENST00000548431 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
CALCOCO1-211ENST00000548431 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-211ENST00000548431 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
CALCOCO1-211ENST00000548431 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
CALCOCO1-211ENST00000548431 CUX2O14529 1486 aa12.08□□□□□ -0.48
CALCOCO1-211ENST00000548431 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
CALCOCO1-211ENST00000548431 TOP2BQ02880 1626 aa12.07□□□□□ -0.48
CALCOCO1-211ENST00000548431 BIVM-ERCC5R4GMW8 1640 aa12.06□□□□□ -0.48
CALCOCO1-211ENST00000548431 CUX1P39880 1505 aa12.03□□□□□ -0.48
CALCOCO1-211ENST00000548431 TOPBP1Q92547 1522 aa12.03□□□□□ -0.48
CALCOCO1-211ENST00000548431 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
CALCOCO1-211ENST00000548431 SYNJ1O43426 1573 aa12.03□□□□□ -0.48
CALCOCO1-211ENST00000548431 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
CALCOCO1-211ENST00000548431 TARBP1Q13395 1621 aaKnown RBP11.99□□□□□ -0.49
CALCOCO1-211ENST00000548431 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
CALCOCO1-211ENST00000548431 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
CALCOCO1-211ENST00000548431 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
CALCOCO1-211ENST00000548431 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
CALCOCO1-211ENST00000548431 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
CALCOCO1-211ENST00000548431 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
CALCOCO1-211ENST00000548431 SOGA1O94964 1423 aa11.89□□□□□ -0.51
CALCOCO1-211ENST00000548431 EEA1Q15075 1411 aa11.89□□□□□ -0.51
CALCOCO1-211ENST00000548431 ABCA10Q8WWZ4 1543 aa11.88□□□□□ -0.51
CALCOCO1-211ENST00000548431 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO1-211ENST00000548431 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
CALCOCO1-211ENST00000548431 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
CALCOCO1-211ENST00000548431 CHD1O14646 1710 aa11.83□□□□□ -0.52
CALCOCO1-211ENST00000548431 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
CALCOCO1-211ENST00000548431 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
CALCOCO1-211ENST00000548431 ADAMTS12P58397 1594 aa11.77□□□□□ -0.53
CALCOCO1-211ENST00000548431 CUL7Q14999 1698 aa11.76□□□□□ -0.53
CALCOCO1-211ENST00000548431 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
CALCOCO1-211ENST00000548431 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
CALCOCO1-211ENST00000548431 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
CALCOCO1-211ENST00000548431 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.533e-6■■■■□ 24.7
CALCOCO1-211ENST00000548431 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.53
CALCOCO1-211ENST00000548431 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
CALCOCO1-211ENST00000548431 KIF21BO75037 1637 aa11.71□□□□□ -0.54
CALCOCO1-211ENST00000548431 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
CALCOCO1-211ENST00000548431 IGF1RP08069 1367 aa11.69□□□□□ -0.54
CALCOCO1-211ENST00000548431 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
CALCOCO1-211ENST00000548431 FHAD1B1AJZ9 1412 aa11.67□□□□□ -0.54
CALCOCO1-211ENST00000548431 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
CALCOCO1-211ENST00000548431 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
CALCOCO1-211ENST00000548431 CARMIL1Q5VZK9 1371 aa11.66□□□□□ -0.54
CALCOCO1-211ENST00000548431 GOLGA3Q08378 1498 aa11.65□□□□□ -0.54
CALCOCO1-211ENST00000548431 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
CALCOCO1-211ENST00000548431 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
CALCOCO1-211ENST00000548431 CEP170Q5SW79 1584 aa11.61□□□□□ -0.55
CALCOCO1-211ENST00000548431 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
CALCOCO1-211ENST00000548431 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
CALCOCO1-211ENST00000548431 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO1-211ENST00000548431 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
CALCOCO1-211ENST00000548431 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
CALCOCO1-211ENST00000548431 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms