RNA–Protein interactions for RNA: ENST00000529893.5

GMDS-AS1-205, humanhuman

TSL 5 BASIC

Gene GMDS-AS1, Length 900 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-AS1-205ENST00000529893 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
GMDS-AS1-205ENST00000529893 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
GMDS-AS1-205ENST00000529893 ABCC9O60706 1549 aa37.56■■■■□ 3.6
GMDS-AS1-205ENST00000529893 RB1CC1Q8TDY2 1594 aa35.82■■■■□ 3.32
GMDS-AS1-205ENST00000529893 NACADO15069 1562 aa35.61■■■■□ 3.29
GMDS-AS1-205ENST00000529893 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
GMDS-AS1-205ENST00000529893 UNC13AQ9UPW8 1703 aa35.21■■■■□ 3.23
GMDS-AS1-205ENST00000529893 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
GMDS-AS1-205ENST00000529893 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
GMDS-AS1-205ENST00000529893 PABPN1Q86U42 306 aaKnown RBP eCLIP34.94■■■■□ 3.18
GMDS-AS1-205ENST00000529893 ZCCHC6Q5VYS8 1495 aaKnown RBP34.86■■■■□ 3.17
GMDS-AS1-205ENST00000529893 BICRAQ9NZM4 1560 aa34.84■■■■□ 3.17
GMDS-AS1-205ENST00000529893 DCAF1Q9Y4B6 1507 aa34.74■■■■□ 3.15
GMDS-AS1-205ENST00000529893 SCRIBQ14160 1630 aa34.35■■■■□ 3.09
GMDS-AS1-205ENST00000529893 SHROOM4Q9ULL8 1493 aa34.3■■■■□ 3.08
GMDS-AS1-205ENST00000529893 CC2D2AQ9P2K1 1620 aa34■■■■□ 3.03
GMDS-AS1-205ENST00000529893 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
GMDS-AS1-205ENST00000529893 CECR2Q9BXF3 1484 aa33.82■■■■□ 3
GMDS-AS1-205ENST00000529893 NCAPD3P42695 1498 aa32.85■■■□□ 2.85
GMDS-AS1-205ENST00000529893 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
GMDS-AS1-205ENST00000529893 ATAD2BQ9ULI0 1458 aa32.76■■■□□ 2.84
GMDS-AS1-205ENST00000529893 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
GMDS-AS1-205ENST00000529893 HMGXB3Q12766 1538 aa32.64■■■□□ 2.82
GMDS-AS1-205ENST00000529893 BAZ1AQ9NRL2 1556 aaPredicted RBP32.61■■■□□ 2.81
GMDS-AS1-205ENST00000529893 PEG3Q9GZU2 1588 aa32.5■■■□□ 2.79
GMDS-AS1-205ENST00000529893 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
GMDS-AS1-205ENST00000529893 MROH2BQ7Z745 1585 aa32.4■■■□□ 2.78
GMDS-AS1-205ENST00000529893 ERCC6Q03468 1493 aa32.37■■■□□ 2.77
GMDS-AS1-205ENST00000529893 CUX2O14529 1486 aa32.33■■■□□ 2.77
GMDS-AS1-205ENST00000529893 NESP48681 1621 aa32.33■■■□□ 2.77
GMDS-AS1-205ENST00000529893 DNAJC5Q9H3Z4 198 aa32.2■■■□□ 2.75
GMDS-AS1-205ENST00000529893 LAMC3Q9Y6N6 1575 aa32.12■■■□□ 2.73
GMDS-AS1-205ENST00000529893 WIZO95785 1651 aa32.07■■■□□ 2.72
GMDS-AS1-205ENST00000529893 THOC2Q8NI27 1593 aaKnown RBP32.03■■■□□ 2.72
GMDS-AS1-205ENST00000529893 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
GMDS-AS1-205ENST00000529893 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
GMDS-AS1-205ENST00000529893 CADPSQ9ULU8 1353 aa31.82■■■□□ 2.69
GMDS-AS1-205ENST00000529893 RSF1Q96T23 1441 aaPredicted RBP31.73■■■□□ 2.67
GMDS-AS1-205ENST00000529893 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
GMDS-AS1-205ENST00000529893 MRC2Q9UBG0 1479 aa31.61■■■□□ 2.65
GMDS-AS1-205ENST00000529893 WDR62O43379 1518 aa31.58■■■□□ 2.65
GMDS-AS1-205ENST00000529893 CFTRP13569 1480 aa31.51■■■□□ 2.63
GMDS-AS1-205ENST00000529893 CEP164Q9UPV0 1460 aa31.49■■■□□ 2.63
GMDS-AS1-205ENST00000529893 FANCD2Q9BXW9 1451 aa31.47■■■□□ 2.63
GMDS-AS1-205ENST00000529893 PRDM2Q13029 1718 aa31.38■■■□□ 2.61
GMDS-AS1-205ENST00000529893 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
GMDS-AS1-205ENST00000529893 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
GMDS-AS1-205ENST00000529893 TOPBP1Q92547 1522 aa30.92■■■□□ 2.54
GMDS-AS1-205ENST00000529893 IFT140Q96RY7 1462 aa30.86■■■□□ 2.53
GMDS-AS1-205ENST00000529893 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
GMDS-AS1-205ENST00000529893 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
GMDS-AS1-205ENST00000529893 DNMBPQ6XZF7 1577 aa30.83■■■□□ 2.53
GMDS-AS1-205ENST00000529893 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
GMDS-AS1-205ENST00000529893 TRIM41Q8WV44 630 aa30.76■■■□□ 2.51
GMDS-AS1-205ENST00000529893 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
GMDS-AS1-205ENST00000529893 TARBP1Q13395 1621 aaKnown RBP30.69■■■□□ 2.5
GMDS-AS1-205ENST00000529893 POLA1P09884 1462 aaPredicted RBP30.6■■■□□ 2.49
GMDS-AS1-205ENST00000529893 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.48
GMDS-AS1-205ENST00000529893 CHD1O14646 1710 aa30.53■■■□□ 2.48
GMDS-AS1-205ENST00000529893 RIMBP3CA6NJZ7 1639 aa30.53■■■□□ 2.48
GMDS-AS1-205ENST00000529893 RIMBP3BA6NNM3 1639 aa30.53■■■□□ 2.48
GMDS-AS1-205ENST00000529893 RIMBP3Q9UFD9 1639 aa30.53■■■□□ 2.48
GMDS-AS1-205ENST00000529893 RAD54L2Q9Y4B4 1467 aa30.49■■■□□ 2.47
GMDS-AS1-205ENST00000529893 CUX1P39880 1505 aa30.43■■■□□ 2.46
GMDS-AS1-205ENST00000529893 SOGA1O94964 1423 aa30.43■■■□□ 2.46
GMDS-AS1-205ENST00000529893 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
GMDS-AS1-205ENST00000529893 ARHGEF11O15085 1522 aa30.39■■■□□ 2.46
GMDS-AS1-205ENST00000529893 WDR97A6NE52 1622 aa30.36■■■□□ 2.45
GMDS-AS1-205ENST00000529893 TDRD9Q8NDG6 1382 aaKnown RBP30.35■■■□□ 2.45
GMDS-AS1-205ENST00000529893 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
GMDS-AS1-205ENST00000529893 FBLN2P98095 1184 aa30.25■■■□□ 2.43
GMDS-AS1-205ENST00000529893 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
GMDS-AS1-205ENST00000529893 PBRM1Q86U86 1689 aa30.18■■■□□ 2.42
GMDS-AS1-205ENST00000529893 MAGI1Q96QZ7 1491 aaPredicted RBP30.17■■■□□ 2.42
GMDS-AS1-205ENST00000529893 GRIN2BQ13224 1484 aa30.16■■■□□ 2.42
GMDS-AS1-205ENST00000529893 CLASP1Q7Z460 1538 aa30.12■■■□□ 2.41
GMDS-AS1-205ENST00000529893 ARAP1Q96P48 1450 aa30.1■■■□□ 2.41
GMDS-AS1-205ENST00000529893 CYB5RLQ6IPT4 315 aa30.09■■■□□ 2.41
GMDS-AS1-205ENST00000529893 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
GMDS-AS1-205ENST00000529893 ABCA5Q8WWZ7 1642 aa30.09■■■□□ 2.41
GMDS-AS1-205ENST00000529893 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
GMDS-AS1-205ENST00000529893 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
GMDS-AS1-205ENST00000529893 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
GMDS-AS1-205ENST00000529893 CHMP7Q8WUX9 453 aaPredicted RBP30.05■■■□□ 2.4
GMDS-AS1-205ENST00000529893 BIVM-ERCC5R4GMW8 1640 aa30.03■■■□□ 2.4
GMDS-AS1-205ENST00000529893 TOP2BQ02880 1626 aa29.99■■■□□ 2.39
GMDS-AS1-205ENST00000529893 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
GMDS-AS1-205ENST00000529893 ADAMTS12P58397 1594 aa29.83■■■□□ 2.37
GMDS-AS1-205ENST00000529893 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
GMDS-AS1-205ENST00000529893 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
GMDS-AS1-205ENST00000529893 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
GMDS-AS1-205ENST00000529893 NUP160Q12769 1436 aa29.7■■■□□ 2.34
GMDS-AS1-205ENST00000529893 TRHP20396 242 aaPredicted RBP29.69■■■□□ 2.34
GMDS-AS1-205ENST00000529893 FHAD1B1AJZ9 1412 aa29.68■■■□□ 2.34
GMDS-AS1-205ENST00000529893 ERCC6L2Q5T890 1561 aa29.67■■■□□ 2.34
GMDS-AS1-205ENST00000529893 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
GMDS-AS1-205ENST00000529893 RUSC2Q8N2Y8 1516 aa29.41■■■□□ 2.3
GMDS-AS1-205ENST00000529893 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
GMDS-AS1-205ENST00000529893 JPH4Q96JJ6 628 aa29.34■■■□□ 2.29
GMDS-AS1-205ENST00000529893 CUL7Q14999 1698 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms