RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
CALCOCO1-210ENST00000548263 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
CALCOCO1-210ENST00000548263 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
CALCOCO1-210ENST00000548263 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
CALCOCO1-210ENST00000548263 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
CALCOCO1-210ENST00000548263 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
CALCOCO1-210ENST00000548263 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
CALCOCO1-210ENST00000548263 HRCP23327 699 aa15.27■□□□□ 0.04
CALCOCO1-210ENST00000548263 ABCC9O60706 1549 aa15.21■□□□□ 0.02
CALCOCO1-210ENST00000548263 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
CALCOCO1-210ENST00000548263 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
CALCOCO1-210ENST00000548263 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
CALCOCO1-210ENST00000548263 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
CALCOCO1-210ENST00000548263 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
CALCOCO1-210ENST00000548263 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
CALCOCO1-210ENST00000548263 TRIM26Q12899 539 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-210ENST00000548263 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
CALCOCO1-210ENST00000548263 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
CALCOCO1-210ENST00000548263 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
CALCOCO1-210ENST00000548263 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
CALCOCO1-210ENST00000548263 RANGAP1P46060 587 aaPredicted RBP14.68□□□□□ -0.06
CALCOCO1-210ENST00000548263 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
CALCOCO1-210ENST00000548263 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
CALCOCO1-210ENST00000548263 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
CALCOCO1-210ENST00000548263 DCAF1Q9Y4B6 1507 aa14.53□□□□□ -0.08
CALCOCO1-210ENST00000548263 CENPBP07199 599 aaPredicted RBP14.52□□□□□ -0.08
CALCOCO1-210ENST00000548263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
CALCOCO1-210ENST00000548263 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
CALCOCO1-210ENST00000548263 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-210ENST00000548263 UNC13AQ9UPW8 1703 aa14.36□□□□□ -0.11
CALCOCO1-210ENST00000548263 NACADO15069 1562 aa14.34□□□□□ -0.11
CALCOCO1-210ENST00000548263 APLP2Q06481 763 aa14.34□□□□□ -0.11
CALCOCO1-210ENST00000548263 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
CALCOCO1-210ENST00000548263 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
CALCOCO1-210ENST00000548263 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
CALCOCO1-210ENST00000548263 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
CALCOCO1-210ENST00000548263 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
CALCOCO1-210ENST00000548263 GTF3C3Q9Y5Q9 886 aa14.21□□□□□ -0.14
CALCOCO1-210ENST00000548263 ACIN1Q9UKV3 1341 aaKnown RBP14.17□□□□□ -0.14
CALCOCO1-210ENST00000548263 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
CALCOCO1-210ENST00000548263 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
CALCOCO1-210ENST00000548263 MYT1Q01538 1121 aa14.12□□□□□ -0.15
CALCOCO1-210ENST00000548263 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
CALCOCO1-210ENST00000548263 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
CALCOCO1-210ENST00000548263 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
CALCOCO1-210ENST00000548263 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-210ENST00000548263 ITGAEP38570 1179 aa13.96□□□□□ -0.17
CALCOCO1-210ENST00000548263 WIZO95785 1651 aa13.95□□□□□ -0.18
CALCOCO1-210ENST00000548263 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
CALCOCO1-210ENST00000548263 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO1-210ENST00000548263 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
CALCOCO1-210ENST00000548263 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
CALCOCO1-210ENST00000548263 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
CALCOCO1-210ENST00000548263 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.2
CALCOCO1-210ENST00000548263 MIER1Q8N108 512 aa13.77□□□□□ -0.21
CALCOCO1-210ENST00000548263 SOGA1O94964 1423 aa13.76□□□□□ -0.21
CALCOCO1-210ENST00000548263 NEFLP07196 543 aa13.76□□□□□ -0.21
CALCOCO1-210ENST00000548263 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
CALCOCO1-210ENST00000548263 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
CALCOCO1-210ENST00000548263 BCANQ96GW7 911 aa13.67□□□□□ -0.22
CALCOCO1-210ENST00000548263 CEP162Q5TB80 1403 aa13.67□□□□□ -0.22
CALCOCO1-210ENST00000548263 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
CALCOCO1-210ENST00000548263 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
CALCOCO1-210ENST00000548263 FBLN2P98095 1184 aa13.64□□□□□ -0.23
CALCOCO1-210ENST00000548263 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
CALCOCO1-210ENST00000548263 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-210ENST00000548263 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.23
CALCOCO1-210ENST00000548263 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
CALCOCO1-210ENST00000548263 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
CALCOCO1-210ENST00000548263 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
CALCOCO1-210ENST00000548263 CLIP1P30622 1438 aa13.5□□□□□ -0.25
CALCOCO1-210ENST00000548263 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CALCOCO1-210ENST00000548263 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
CALCOCO1-210ENST00000548263 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
CALCOCO1-210ENST00000548263 EEA1Q15075 1411 aa13.45□□□□□ -0.26
CALCOCO1-210ENST00000548263 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
CALCOCO1-210ENST00000548263 FKBP8Q14318 412 aa13.45□□□□□ -0.26
CALCOCO1-210ENST00000548263 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-210ENST00000548263 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
CALCOCO1-210ENST00000548263 ANP32CO43423 234 aa13.41□□□□□ -0.26
CALCOCO1-210ENST00000548263 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-210ENST00000548263 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
CALCOCO1-210ENST00000548263 CC2D2AQ9P2K1 1620 aa13.37□□□□□ -0.27
CALCOCO1-210ENST00000548263 CUX2O14529 1486 aa13.36□□□□□ -0.27
CALCOCO1-210ENST00000548263 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
CALCOCO1-210ENST00000548263 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
CALCOCO1-210ENST00000548263 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
CALCOCO1-210ENST00000548263 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
CALCOCO1-210ENST00000548263 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
CALCOCO1-210ENST00000548263 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-210ENST00000548263 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
CALCOCO1-210ENST00000548263 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-210ENST00000548263 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
CALCOCO1-210ENST00000548263 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
CALCOCO1-210ENST00000548263 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-210ENST00000548263 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.28
CALCOCO1-210ENST00000548263 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
CALCOCO1-210ENST00000548263 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
CALCOCO1-210ENST00000548263 SYNJ1O43426 1573 aa13.25□□□□□ -0.29
CALCOCO1-210ENST00000548263 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms