RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
CALCOCO1-208ENST00000547988 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
CALCOCO1-208ENST00000547988 ABCC9O60706 1549 aa23.52■■□□□ 1.36
CALCOCO1-208ENST00000547988 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
CALCOCO1-208ENST00000547988 NACADO15069 1562 aa22.84■■□□□ 1.25
CALCOCO1-208ENST00000547988 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
CALCOCO1-208ENST00000547988 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
CALCOCO1-208ENST00000547988 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
CALCOCO1-208ENST00000547988 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
CALCOCO1-208ENST00000547988 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
CALCOCO1-208ENST00000547988 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
CALCOCO1-208ENST00000547988 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
CALCOCO1-208ENST00000547988 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
CALCOCO1-208ENST00000547988 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
CALCOCO1-208ENST00000547988 EIF4G1Q04637 1599 aaKnown RBP21.49■■□□□ 1.03
CALCOCO1-208ENST00000547988 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
CALCOCO1-208ENST00000547988 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
CALCOCO1-208ENST00000547988 SMARCA4P51532 1647 aa21.28■■□□□ 1
CALCOCO1-208ENST00000547988 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
CALCOCO1-208ENST00000547988 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■□□□□ 0.99
CALCOCO1-208ENST00000547988 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
CALCOCO1-208ENST00000547988 SMARCA2P51531 1590 aa21.09■□□□□ 0.97
CALCOCO1-208ENST00000547988 PEG3Q9GZU2 1588 aa21.08■□□□□ 0.97
CALCOCO1-208ENST00000547988 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
CALCOCO1-208ENST00000547988 NCAPD3P42695 1498 aa21■□□□□ 0.95
CALCOCO1-208ENST00000547988 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
CALCOCO1-208ENST00000547988 WIZO95785 1651 aa20.95■□□□□ 0.94
CALCOCO1-208ENST00000547988 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
CALCOCO1-208ENST00000547988 BAZ1BQ9UIG0 1483 aaKnown RBP20.89■□□□□ 0.94
CALCOCO1-208ENST00000547988 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
CALCOCO1-208ENST00000547988 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
CALCOCO1-208ENST00000547988 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
CALCOCO1-208ENST00000547988 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
CALCOCO1-208ENST00000547988 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
CALCOCO1-208ENST00000547988 NESP48681 1621 aa20.42■□□□□ 0.86
CALCOCO1-208ENST00000547988 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
CALCOCO1-208ENST00000547988 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
CALCOCO1-208ENST00000547988 CFTRP13569 1480 aa20.32■□□□□ 0.84
CALCOCO1-208ENST00000547988 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
CALCOCO1-208ENST00000547988 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.83
CALCOCO1-208ENST00000547988 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
CALCOCO1-208ENST00000547988 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
CALCOCO1-208ENST00000547988 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
CALCOCO1-208ENST00000547988 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
CALCOCO1-208ENST00000547988 WDR62O43379 1518 aa20.03■□□□□ 0.8
CALCOCO1-208ENST00000547988 CUX2O14529 1486 aa20.03■□□□□ 0.8
CALCOCO1-208ENST00000547988 URB2Q14146 1524 aaKnown RBP19.95■□□□□ 0.78
CALCOCO1-208ENST00000547988 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
CALCOCO1-208ENST00000547988 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
CALCOCO1-208ENST00000547988 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
CALCOCO1-208ENST00000547988 CUX1P39880 1505 aa19.81■□□□□ 0.76
CALCOCO1-208ENST00000547988 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
CALCOCO1-208ENST00000547988 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
CALCOCO1-208ENST00000547988 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
CALCOCO1-208ENST00000547988 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
CALCOCO1-208ENST00000547988 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
CALCOCO1-208ENST00000547988 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
CALCOCO1-208ENST00000547988 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
CALCOCO1-208ENST00000547988 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
CALCOCO1-208ENST00000547988 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
CALCOCO1-208ENST00000547988 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
CALCOCO1-208ENST00000547988 SOGA1O94964 1423 aa19.59■□□□□ 0.73
CALCOCO1-208ENST00000547988 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
CALCOCO1-208ENST00000547988 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
CALCOCO1-208ENST00000547988 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
CALCOCO1-208ENST00000547988 PBRM1Q86U86 1689 aa19.5■□□□□ 0.71
CALCOCO1-208ENST00000547988 ABCA5Q8WWZ7 1642 aa19.5■□□□□ 0.71
CALCOCO1-208ENST00000547988 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.71e-6■■■■■ 31.2
CALCOCO1-208ENST00000547988 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
CALCOCO1-208ENST00000547988 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
CALCOCO1-208ENST00000547988 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
CALCOCO1-208ENST00000547988 CHD1O14646 1710 aa19.37■□□□□ 0.69
CALCOCO1-208ENST00000547988 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
CALCOCO1-208ENST00000547988 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
CALCOCO1-208ENST00000547988 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
CALCOCO1-208ENST00000547988 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
CALCOCO1-208ENST00000547988 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
CALCOCO1-208ENST00000547988 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
CALCOCO1-208ENST00000547988 CUL7Q14999 1698 aa19.26■□□□□ 0.67
CALCOCO1-208ENST00000547988 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
CALCOCO1-208ENST00000547988 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
CALCOCO1-208ENST00000547988 FHAD1B1AJZ9 1412 aa19.18■□□□□ 0.66
CALCOCO1-208ENST00000547988 IGF1RP08069 1367 aa19.15■□□□□ 0.66
CALCOCO1-208ENST00000547988 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
CALCOCO1-208ENST00000547988 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
CALCOCO1-208ENST00000547988 OSCARQ8IYS5 282 aa19.14■□□□□ 0.65
CALCOCO1-208ENST00000547988 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
CALCOCO1-208ENST00000547988 FBLN2P98095 1184 aa19.13■□□□□ 0.65
CALCOCO1-208ENST00000547988 EEA1Q15075 1411 aa19.09■□□□□ 0.65
CALCOCO1-208ENST00000547988 CLASP1Q7Z460 1538 aa19.08■□□□□ 0.64
CALCOCO1-208ENST00000547988 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
CALCOCO1-208ENST00000547988 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
CALCOCO1-208ENST00000547988 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
CALCOCO1-208ENST00000547988 NUP160Q12769 1436 aa19.04■□□□□ 0.64
CALCOCO1-208ENST00000547988 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
CALCOCO1-208ENST00000547988 CTTNBP2Q8WZ74 1663 aa18.98■□□□□ 0.63
CALCOCO1-208ENST00000547988 PRXQ9BXM0 1461 aa18.98■□□□□ 0.63
CALCOCO1-208ENST00000547988 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
CALCOCO1-208ENST00000547988 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
CALCOCO1-208ENST00000547988 KIF21BO75037 1637 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms