RNA–Protein interactions for RNA: ENST00000530278.5

NFRKB-207, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-207ENST00000530278 NISCHQ9Y2I1 1504 aa53.7■■■■■ 6.19
NFRKB-207ENST00000530278 CCDC180Q9P1Z9 1646 aa47.84■■■■■ 5.25
NFRKB-207ENST00000530278 ABCC9O60706 1549 aa47.13■■■■■ 5.14
NFRKB-207ENST00000530278 RB1CC1Q8TDY2 1594 aa45.18■■■■■ 4.82
NFRKB-207ENST00000530278 DCAF8L2P0C7V8 631 aa45.08■■■■■ 4.81
NFRKB-207ENST00000530278 NACADO15069 1562 aa45.03■■■■■ 4.8
NFRKB-207ENST00000530278 ZCCHC6Q5VYS8 1495 aaKnown RBP44.67■■■■■ 4.74
NFRKB-207ENST00000530278 MYO15BQ96JP2 1530 aa44.63■■■■■ 4.73
NFRKB-207ENST00000530278 DCAF1Q9Y4B6 1507 aa44.37■■■■■ 4.69
NFRKB-207ENST00000530278 UNC13AQ9UPW8 1703 aa44.19■■■■■ 4.66
NFRKB-207ENST00000530278 PABPN1Q86U42 306 aaKnown RBP eCLIP44.01■■■■■ 4.64
NFRKB-207ENST00000530278 BICRAQ9NZM4 1560 aa43.82■■■■■ 4.61
NFRKB-207ENST00000530278 SCRIBQ14160 1630 aa43.71■■■■■ 4.59
NFRKB-207ENST00000530278 DNAJC5BQ9UF47 199 aa43.47■■■■■ 4.55
NFRKB-207ENST00000530278 SHROOM4Q9ULL8 1493 aa43.27■■■■■ 4.52
NFRKB-207ENST00000530278 EIF4G1Q04637 1599 aaKnown RBP42.69■■■■■ 4.43
NFRKB-207ENST00000530278 CC2D2AQ9P2K1 1620 aa42.6■■■■■ 4.41
NFRKB-207ENST00000530278 CECR2Q9BXF3 1484 aa42.35■■■■■ 4.37
NFRKB-207ENST00000530278 SMARCA4P51532 1647 aa41.74■■■■■ 4.27
NFRKB-207ENST00000530278 BAZ1AQ9NRL2 1556 aaPredicted RBP41.64■■■■■ 4.26
NFRKB-207ENST00000530278 ATAD2BQ9ULI0 1458 aa41.56■■■■■ 4.24
NFRKB-207ENST00000530278 NCAPD3P42695 1498 aa41.54■■■■■ 4.24
NFRKB-207ENST00000530278 SMARCA2P51531 1590 aa41.5■■■■■ 4.23
NFRKB-207ENST00000530278 MROH2BQ7Z745 1585 aa41.41■■■■■ 4.22
NFRKB-207ENST00000530278 HMGXB3Q12766 1538 aa41.34■■■■■ 4.21
NFRKB-207ENST00000530278 PEG3Q9GZU2 1588 aa41.28■■■■■ 4.2
NFRKB-207ENST00000530278 BAZ1BQ9UIG0 1483 aaKnown RBP41.23■■■■■ 4.19
NFRKB-207ENST00000530278 WIZO95785 1651 aa40.98■■■■■ 4.15
NFRKB-207ENST00000530278 RSF1Q96T23 1441 aaPredicted RBP40.82■■■■■ 4.12
NFRKB-207ENST00000530278 NESP48681 1621 aa40.71■■■■■ 4.11
NFRKB-207ENST00000530278 ERCC6Q03468 1493 aa40.64■■■■■ 4.1
NFRKB-207ENST00000530278 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
NFRKB-207ENST00000530278 TOP2AP11388 1531 aaKnown RBP40.48■■■■■ 4.07
NFRKB-207ENST00000530278 CADPSQ9ULU8 1353 aa40.35■■■■■ 4.05
NFRKB-207ENST00000530278 PDS5BQ9NTI5 1447 aa40.27■■■■■ 4.04
NFRKB-207ENST00000530278 CUX2O14529 1486 aa40.26■■■■■ 4.03
NFRKB-207ENST00000530278 KIF21AQ7Z4S6 1674 aa40.22■■■■■ 4.03
NFRKB-207ENST00000530278 THOC2Q8NI27 1593 aaKnown RBP40.12■■■■■ 4.01
NFRKB-207ENST00000530278 CFTRP13569 1480 aa40.04■■■■■ 4
NFRKB-207ENST00000530278 CCDC88BA6NC98 1476 aa40.02■■■■■ 4
NFRKB-207ENST00000530278 FANCD2Q9BXW9 1451 aa39.92■■■■□ 3.98
NFRKB-207ENST00000530278 CEP164Q9UPV0 1460 aa39.89■■■■□ 3.98
NFRKB-207ENST00000530278 MRC2Q9UBG0 1479 aa39.88■■■■□ 3.97
NFRKB-207ENST00000530278 PRDM2Q13029 1718 aa39.76■■■■□ 3.96
NFRKB-207ENST00000530278 WDR62O43379 1518 aa39.73■■■■□ 3.95
NFRKB-207ENST00000530278 SUPT5HO00267 1087 aaKnown RBP39.68■■■■□ 3.94
NFRKB-207ENST00000530278 URB2Q14146 1524 aaKnown RBP39.53■■■■□ 3.92
NFRKB-207ENST00000530278 DNAJC5Q9H3Z4 198 aa39.32■■■■□ 3.89
NFRKB-207ENST00000530278 TOPBP1Q92547 1522 aa39.24■■■■□ 3.87
NFRKB-207ENST00000530278 ABCC8Q09428 1581 aa39.19■■■■□ 3.86
NFRKB-207ENST00000530278 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
NFRKB-207ENST00000530278 IFT140Q96RY7 1462 aa39.05■■■■□ 3.84
NFRKB-207ENST00000530278 ZNF608Q9ULD9 1512 aaPredicted RBP38.92■■■■□ 3.82
NFRKB-207ENST00000530278 POLA1P09884 1462 aaPredicted RBP38.89■■■■□ 3.82
NFRKB-207ENST00000530278 CUX1P39880 1505 aa38.86■■■■□ 3.81
NFRKB-207ENST00000530278 TARBP1Q13395 1621 aaKnown RBP38.82■■■■□ 3.81
NFRKB-207ENST00000530278 FGD5Q6ZNL6 1462 aa38.77■■■■□ 3.8
NFRKB-207ENST00000530278 EIF4G3O43432 1585 aaKnown RBP38.76■■■■□ 3.8
NFRKB-207ENST00000530278 RAD54L2Q9Y4B4 1467 aa38.76■■■■□ 3.8
NFRKB-207ENST00000530278 SOGA1O94964 1423 aa38.73■■■■□ 3.79
NFRKB-207ENST00000530278 AQRO60306 1485 aaKnown RBP eCLIP38.67■■■■□ 3.787e-8■■■□□ 17.3
NFRKB-207ENST00000530278 TDRD9Q8NDG6 1382 aaKnown RBP38.57■■■■□ 3.76
NFRKB-207ENST00000530278 OSCARQ8IYS5 282 aa38.56■■■■□ 3.76
NFRKB-207ENST00000530278 WRNQ14191 1432 aaPredicted RBP eCLIP38.51■■■■□ 3.76
NFRKB-207ENST00000530278 WDR97A6NE52 1622 aa38.47■■■■□ 3.75
NFRKB-207ENST00000530278 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
NFRKB-207ENST00000530278 BIVM-ERCC5R4GMW8 1640 aa38.45■■■■□ 3.75
NFRKB-207ENST00000530278 SYNJ1O43426 1573 aa38.44■■■■□ 3.74
NFRKB-207ENST00000530278 ABCA10Q8WWZ4 1543 aa38.35■■■■□ 3.73
NFRKB-207ENST00000530278 CHD1O14646 1710 aa38.34■■■■□ 3.73
NFRKB-207ENST00000530278 SNAPC4Q5SXM2 1469 aa38.32■■■■□ 3.72
NFRKB-207ENST00000530278 FBLN2P98095 1184 aa38.31■■■■□ 3.72
NFRKB-207ENST00000530278 GRIN2BQ13224 1484 aa38.3■■■■□ 3.72
NFRKB-207ENST00000530278 GAPVD1Q14C86 1478 aa38.28■■■■□ 3.72
NFRKB-207ENST00000530278 PBRM1Q86U86 1689 aa38.25■■■■□ 3.71
NFRKB-207ENST00000530278 ABCA5Q8WWZ7 1642 aa38.23■■■■□ 3.71
NFRKB-207ENST00000530278 MAGI1Q96QZ7 1491 aaPredicted RBP38.22■■■■□ 3.71
NFRKB-207ENST00000530278 CHMP7Q8WUX9 453 aaPredicted RBP38.13■■■■□ 3.69
NFRKB-207ENST00000530278 SYNJ2O15056 1496 aa38.08■■■■□ 3.69
NFRKB-207ENST00000530278 TRIM41Q8WV44 630 aa38.02■■■■□ 3.68
NFRKB-207ENST00000530278 RIMBP3CA6NJZ7 1639 aa38■■■■□ 3.67
NFRKB-207ENST00000530278 RIMBP3BA6NNM3 1639 aa38■■■■□ 3.67
NFRKB-207ENST00000530278 RIMBP3Q9UFD9 1639 aa38■■■■□ 3.67
NFRKB-207ENST00000530278 ARHGEF11O15085 1522 aa37.95■■■■□ 3.67
NFRKB-207ENST00000530278 ADAMTS12P58397 1594 aa37.9■■■■□ 3.66
NFRKB-207ENST00000530278 ERICH3Q5RHP9 1530 aa37.9■■■■□ 3.66
NFRKB-207ENST00000530278 CLASP1Q7Z460 1538 aa37.87■■■■□ 3.65
NFRKB-207ENST00000530278 FHAD1B1AJZ9 1412 aa37.82■■■■□ 3.64
NFRKB-207ENST00000530278 GRIN2AQ12879 1464 aa37.81■■■■□ 3.64
NFRKB-207ENST00000530278 KIF27Q86VH2 1401 aa37.71■■■■□ 3.63
NFRKB-207ENST00000530278 CEP170Q5SW79 1584 aa37.65■■■■□ 3.62
NFRKB-207ENST00000530278 CYB5RLQ6IPT4 315 aa37.64■■■■□ 3.62
NFRKB-207ENST00000530278 NUP160Q12769 1436 aa37.63■■■■□ 3.61
NFRKB-207ENST00000530278 ARAP1Q96P48 1450 aa37.63■■■■□ 3.61
NFRKB-207ENST00000530278 IGF1RP08069 1367 aa37.59■■■■□ 3.61
NFRKB-207ENST00000530278 CUL7Q14999 1698 aa37.52■■■■□ 3.6
NFRKB-207ENST00000530278 SHROOM2Q13796 1616 aa37.38■■■■□ 3.57
NFRKB-207ENST00000530278 CARMIL1Q5VZK9 1371 aa37.38■■■■□ 3.57
NFRKB-207ENST00000530278 ERCC6L2Q5T890 1561 aa37.37■■■■□ 3.57
NFRKB-207ENST00000530278 RUSC2Q8N2Y8 1516 aa37.35■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms