RNA–Protein interactions for RNA: ENST00000549173.5

CALCOCO1-212, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-212ENST00000549173 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
CALCOCO1-212ENST00000549173 ABCC9O60706 1549 aa22.74■■□□□ 1.23
CALCOCO1-212ENST00000549173 CCDC180Q9P1Z9 1646 aa22.62■■□□□ 1.21
CALCOCO1-212ENST00000549173 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
CALCOCO1-212ENST00000549173 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
CALCOCO1-212ENST00000549173 NACADO15069 1562 aa21.44■■□□□ 1.02
CALCOCO1-212ENST00000549173 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
CALCOCO1-212ENST00000549173 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
CALCOCO1-212ENST00000549173 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.97
CALCOCO1-212ENST00000549173 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
CALCOCO1-212ENST00000549173 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
CALCOCO1-212ENST00000549173 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
CALCOCO1-212ENST00000549173 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
CALCOCO1-212ENST00000549173 ZCCHC6Q5VYS8 1495 aaKnown RBP20.7■□□□□ 0.9
CALCOCO1-212ENST00000549173 CC2D2AQ9P2K1 1620 aa20.57■□□□□ 0.88
CALCOCO1-212ENST00000549173 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
CALCOCO1-212ENST00000549173 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
CALCOCO1-212ENST00000549173 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
CALCOCO1-212ENST00000549173 DNAJC5Q9H3Z4 198 aa20.05■□□□□ 0.8
CALCOCO1-212ENST00000549173 CUX2O14529 1486 aa19.81■□□□□ 0.76
CALCOCO1-212ENST00000549173 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
CALCOCO1-212ENST00000549173 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
CALCOCO1-212ENST00000549173 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
CALCOCO1-212ENST00000549173 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
CALCOCO1-212ENST00000549173 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
CALCOCO1-212ENST00000549173 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
CALCOCO1-212ENST00000549173 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
CALCOCO1-212ENST00000549173 NESP48681 1621 aa19.46■□□□□ 0.71
CALCOCO1-212ENST00000549173 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
CALCOCO1-212ENST00000549173 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
CALCOCO1-212ENST00000549173 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
CALCOCO1-212ENST00000549173 THOC2Q8NI27 1593 aaKnown RBP19.37■□□□□ 0.69
CALCOCO1-212ENST00000549173 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
CALCOCO1-212ENST00000549173 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
CALCOCO1-212ENST00000549173 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
CALCOCO1-212ENST00000549173 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
CALCOCO1-212ENST00000549173 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
CALCOCO1-212ENST00000549173 WDR62O43379 1518 aa19.08■□□□□ 0.64
CALCOCO1-212ENST00000549173 WIZO95785 1651 aa18.98■□□□□ 0.63
CALCOCO1-212ENST00000549173 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
CALCOCO1-212ENST00000549173 TRIM41Q8WV44 630 aa18.95■□□□□ 0.62
CALCOCO1-212ENST00000549173 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
CALCOCO1-212ENST00000549173 CFTRP13569 1480 aa18.9■□□□□ 0.62
CALCOCO1-212ENST00000549173 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
CALCOCO1-212ENST00000549173 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
CALCOCO1-212ENST00000549173 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
CALCOCO1-212ENST00000549173 URB2Q14146 1524 aaKnown RBP18.76■□□□□ 0.59
CALCOCO1-212ENST00000549173 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
CALCOCO1-212ENST00000549173 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
CALCOCO1-212ENST00000549173 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
CALCOCO1-212ENST00000549173 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
CALCOCO1-212ENST00000549173 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
CALCOCO1-212ENST00000549173 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
CALCOCO1-212ENST00000549173 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
CALCOCO1-212ENST00000549173 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
CALCOCO1-212ENST00000549173 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
CALCOCO1-212ENST00000549173 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
CALCOCO1-212ENST00000549173 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
CALCOCO1-212ENST00000549173 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
CALCOCO1-212ENST00000549173 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
CALCOCO1-212ENST00000549173 CHD1O14646 1710 aa18.35■□□□□ 0.53
CALCOCO1-212ENST00000549173 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■■■■ 31.2
CALCOCO1-212ENST00000549173 CYB5RLQ6IPT4 315 aa18.33■□□□□ 0.52
CALCOCO1-212ENST00000549173 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
CALCOCO1-212ENST00000549173 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
CALCOCO1-212ENST00000549173 WDR97A6NE52 1622 aa18.27■□□□□ 0.52
CALCOCO1-212ENST00000549173 FBLN2P98095 1184 aa18.23■□□□□ 0.51
CALCOCO1-212ENST00000549173 SOGA1O94964 1423 aa18.23■□□□□ 0.51
CALCOCO1-212ENST00000549173 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
CALCOCO1-212ENST00000549173 TDRD9Q8NDG6 1382 aaKnown RBP18.19■□□□□ 0.5
CALCOCO1-212ENST00000549173 TRHP20396 242 aaPredicted RBP18.19■□□□□ 0.5
CALCOCO1-212ENST00000549173 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
CALCOCO1-212ENST00000549173 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
CALCOCO1-212ENST00000549173 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
CALCOCO1-212ENST00000549173 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
CALCOCO1-212ENST00000549173 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
CALCOCO1-212ENST00000549173 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
CALCOCO1-212ENST00000549173 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
CALCOCO1-212ENST00000549173 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
CALCOCO1-212ENST00000549173 CUX1P39880 1505 aa18.09■□□□□ 0.49
CALCOCO1-212ENST00000549173 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
CALCOCO1-212ENST00000549173 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
CALCOCO1-212ENST00000549173 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
CALCOCO1-212ENST00000549173 ABCA5Q8WWZ7 1642 aa17.96■□□□□ 0.47
CALCOCO1-212ENST00000549173 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
CALCOCO1-212ENST00000549173 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
CALCOCO1-212ENST00000549173 NUP160Q12769 1436 aa17.85■□□□□ 0.45
CALCOCO1-212ENST00000549173 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
CALCOCO1-212ENST00000549173 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
CALCOCO1-212ENST00000549173 SHROOM2Q13796 1616 aa17.81■□□□□ 0.44
CALCOCO1-212ENST00000549173 CEP170Q5SW79 1584 aa17.81■□□□□ 0.44
CALCOCO1-212ENST00000549173 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
CALCOCO1-212ENST00000549173 FHAD1B1AJZ9 1412 aa17.8■□□□□ 0.44
CALCOCO1-212ENST00000549173 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
CALCOCO1-212ENST00000549173 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
CALCOCO1-212ENST00000549173 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
CALCOCO1-212ENST00000549173 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
CALCOCO1-212ENST00000549173 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
CALCOCO1-212ENST00000549173 SUPT5HO00267 1087 aaKnown RBP17.63■□□□□ 0.41
CALCOCO1-212ENST00000549173 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms