RNA–Protein interactions for RNA: ENST00000529319.5

NFRKB-206, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-206ENST00000529319 NISCHQ9Y2I1 1504 aa55.92■■■■■ 6.54
NFRKB-206ENST00000529319 CCDC180Q9P1Z9 1646 aa49.75■■■■■ 5.56
NFRKB-206ENST00000529319 ABCC9O60706 1549 aa48.91■■■■■ 5.42
NFRKB-206ENST00000529319 DCAF8L2P0C7V8 631 aa47.05■■■■■ 5.12
NFRKB-206ENST00000529319 RB1CC1Q8TDY2 1594 aa46.98■■■■■ 5.11
NFRKB-206ENST00000529319 NACADO15069 1562 aa46.87■■■■■ 5.09
NFRKB-206ENST00000529319 ZCCHC6Q5VYS8 1495 aaKnown RBP46.5■■■■■ 5.03
NFRKB-206ENST00000529319 MYO15BQ96JP2 1530 aa46.49■■■■■ 5.03
NFRKB-206ENST00000529319 DCAF1Q9Y4B6 1507 aa46.23■■■■■ 4.99
NFRKB-206ENST00000529319 UNC13AQ9UPW8 1703 aa45.82■■■■■ 4.93
NFRKB-206ENST00000529319 PABPN1Q86U42 306 aaKnown RBP eCLIP45.75■■■■■ 4.91
NFRKB-206ENST00000529319 BICRAQ9NZM4 1560 aa45.45■■■■■ 4.87
NFRKB-206ENST00000529319 SCRIBQ14160 1630 aa45.42■■■■■ 4.86
NFRKB-206ENST00000529319 DNAJC5BQ9UF47 199 aa45.03■■■■■ 4.8
NFRKB-206ENST00000529319 SHROOM4Q9ULL8 1493 aa45■■■■■ 4.79
NFRKB-206ENST00000529319 EIF4G1Q04637 1599 aaKnown RBP44.32■■■■■ 4.69
NFRKB-206ENST00000529319 CC2D2AQ9P2K1 1620 aa44.2■■■■■ 4.67
NFRKB-206ENST00000529319 CECR2Q9BXF3 1484 aa43.97■■■■■ 4.63
NFRKB-206ENST00000529319 SMARCA4P51532 1647 aa43.4■■■■■ 4.54
NFRKB-206ENST00000529319 BAZ1AQ9NRL2 1556 aaPredicted RBP43.37■■■■■ 4.53
NFRKB-206ENST00000529319 NCAPD3P42695 1498 aa43.25■■■■■ 4.51
NFRKB-206ENST00000529319 ATAD2BQ9ULI0 1458 aa43.24■■■■■ 4.51
NFRKB-206ENST00000529319 SMARCA2P51531 1590 aa43.2■■■■■ 4.51
NFRKB-206ENST00000529319 MROH2BQ7Z745 1585 aa43.08■■■■■ 4.49
NFRKB-206ENST00000529319 HMGXB3Q12766 1538 aa42.97■■■■■ 4.47
NFRKB-206ENST00000529319 PEG3Q9GZU2 1588 aa42.95■■■■■ 4.47
NFRKB-206ENST00000529319 BAZ1BQ9UIG0 1483 aaKnown RBP42.91■■■■■ 4.46
NFRKB-206ENST00000529319 WIZO95785 1651 aa42.63■■■■■ 4.41
NFRKB-206ENST00000529319 RSF1Q96T23 1441 aaPredicted RBP42.55■■■■■ 4.4
NFRKB-206ENST00000529319 NESP48681 1621 aa42.24■■■■■ 4.35
NFRKB-206ENST00000529319 ERCC6Q03468 1493 aa42.23■■■■■ 4.35
NFRKB-206ENST00000529319 TOP2AP11388 1531 aaKnown RBP42.15■■■■■ 4.34
NFRKB-206ENST00000529319 LAMC3Q9Y6N6 1575 aa42.13■■■■■ 4.33
NFRKB-206ENST00000529319 CADPSQ9ULU8 1353 aa42.02■■■■■ 4.32
NFRKB-206ENST00000529319 PDS5BQ9NTI5 1447 aa41.93■■■■■ 4.3
NFRKB-206ENST00000529319 CUX2O14529 1486 aa41.77■■■■■ 4.28
NFRKB-206ENST00000529319 KIF21AQ7Z4S6 1674 aa41.71■■■■■ 4.27
NFRKB-206ENST00000529319 CCDC88BA6NC98 1476 aa41.7■■■■■ 4.27
NFRKB-206ENST00000529319 CFTRP13569 1480 aa41.68■■■■■ 4.26
NFRKB-206ENST00000529319 THOC2Q8NI27 1593 aaKnown RBP41.57■■■■■ 4.25
NFRKB-206ENST00000529319 SUPT5HO00267 1087 aaKnown RBP41.54■■■■■ 4.24
NFRKB-206ENST00000529319 FANCD2Q9BXW9 1451 aa41.52■■■■■ 4.24
NFRKB-206ENST00000529319 CEP164Q9UPV0 1460 aa41.48■■■■■ 4.23
NFRKB-206ENST00000529319 MRC2Q9UBG0 1479 aa41.44■■■■■ 4.22
NFRKB-206ENST00000529319 PRDM2Q13029 1718 aa41.32■■■■■ 4.21
NFRKB-206ENST00000529319 WDR62O43379 1518 aa41.26■■■■■ 4.2
NFRKB-206ENST00000529319 URB2Q14146 1524 aaKnown RBP41.06■■■■■ 4.16
NFRKB-206ENST00000529319 ABCC8Q09428 1581 aa40.87■■■■■ 4.13
NFRKB-206ENST00000529319 TOPBP1Q92547 1522 aa40.82■■■■■ 4.12
NFRKB-206ENST00000529319 DNAJC5Q9H3Z4 198 aa40.75■■■■■ 4.11
NFRKB-206ENST00000529319 DNMBPQ6XZF7 1577 aa40.74■■■■■ 4.11
NFRKB-206ENST00000529319 IFT140Q96RY7 1462 aa40.63■■■■■ 4.09
NFRKB-206ENST00000529319 POLA1P09884 1462 aaPredicted RBP40.45■■■■■ 4.07
NFRKB-206ENST00000529319 CUX1P39880 1505 aa40.42■■■■■ 4.06
NFRKB-206ENST00000529319 ZNF608Q9ULD9 1512 aaPredicted RBP40.42■■■■■ 4.06
NFRKB-206ENST00000529319 SOGA1O94964 1423 aa40.37■■■■■ 4.05
NFRKB-206ENST00000529319 FGD5Q6ZNL6 1462 aa40.34■■■■■ 4.05
NFRKB-206ENST00000529319 TARBP1Q13395 1621 aaKnown RBP40.34■■■■■ 4.05
NFRKB-206ENST00000529319 RAD54L2Q9Y4B4 1467 aa40.3■■■■■ 4.04
NFRKB-206ENST00000529319 AQRO60306 1485 aaKnown RBP eCLIP40.22■■■■■ 4.032e-10■■■■□ 22.5
NFRKB-206ENST00000529319 EIF4G3O43432 1585 aaKnown RBP40.22■■■■■ 4.03
NFRKB-206ENST00000529319 WRNQ14191 1432 aaPredicted RBP eCLIP40.16■■■■■ 4.02
NFRKB-206ENST00000529319 OSCARQ8IYS5 282 aa40.15■■■■■ 4.02
NFRKB-206ENST00000529319 TDRD9Q8NDG6 1382 aaKnown RBP40.14■■■■■ 4.02
NFRKB-206ENST00000529319 TOP2BQ02880 1626 aa40.05■■■■■ 4
NFRKB-206ENST00000529319 WDR97A6NE52 1622 aa40.04■■■■■ 4
NFRKB-206ENST00000529319 BIVM-ERCC5R4GMW8 1640 aa40.02■■■■■ 4
NFRKB-206ENST00000529319 SYNJ1O43426 1573 aa40■■■■□ 3.99
NFRKB-206ENST00000529319 ABCA10Q8WWZ4 1543 aa39.93■■■■□ 3.98
NFRKB-206ENST00000529319 FBLN2P98095 1184 aa39.91■■■■□ 3.98
NFRKB-206ENST00000529319 GRIN2BQ13224 1484 aa39.88■■■■□ 3.97
NFRKB-206ENST00000529319 GAPVD1Q14C86 1478 aa39.87■■■■□ 3.97
NFRKB-206ENST00000529319 SNAPC4Q5SXM2 1469 aa39.81■■■■□ 3.96
NFRKB-206ENST00000529319 CHD1O14646 1710 aa39.77■■■■□ 3.96
NFRKB-206ENST00000529319 MAGI1Q96QZ7 1491 aaPredicted RBP39.76■■■■□ 3.96
NFRKB-206ENST00000529319 CHMP7Q8WUX9 453 aaPredicted RBP39.75■■■■□ 3.95
NFRKB-206ENST00000529319 ABCA5Q8WWZ7 1642 aa39.74■■■■□ 3.95
NFRKB-206ENST00000529319 PBRM1Q86U86 1689 aa39.73■■■■□ 3.95
NFRKB-206ENST00000529319 SYNJ2O15056 1496 aa39.62■■■■□ 3.93
NFRKB-206ENST00000529319 ERICH3Q5RHP9 1530 aa39.46■■■■□ 3.91
NFRKB-206ENST00000529319 TRIM41Q8WV44 630 aa39.42■■■■□ 3.9
NFRKB-206ENST00000529319 FHAD1B1AJZ9 1412 aa39.4■■■■□ 3.9
NFRKB-206ENST00000529319 KIF27Q86VH2 1401 aa39.39■■■■□ 3.9
NFRKB-206ENST00000529319 ADAMTS12P58397 1594 aa39.38■■■■□ 3.9
NFRKB-206ENST00000529319 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
NFRKB-206ENST00000529319 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
NFRKB-206ENST00000529319 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
NFRKB-206ENST00000529319 ARHGEF11O15085 1522 aa39.35■■■■□ 3.89
NFRKB-206ENST00000529319 GRIN2AQ12879 1464 aa39.33■■■■□ 3.89
NFRKB-206ENST00000529319 CLASP1Q7Z460 1538 aa39.3■■■■□ 3.88
NFRKB-206ENST00000529319 IGF1RP08069 1367 aa39.21■■■■□ 3.87
NFRKB-206ENST00000529319 CYB5RLQ6IPT4 315 aa39.15■■■■□ 3.86
NFRKB-206ENST00000529319 NUP160Q12769 1436 aa39.14■■■■□ 3.86
NFRKB-206ENST00000529319 CEP170Q5SW79 1584 aa39.1■■■■□ 3.85
NFRKB-206ENST00000529319 CUL7Q14999 1698 aa39.07■■■■□ 3.85
NFRKB-206ENST00000529319 CARMIL1Q5VZK9 1371 aa39.02■■■■□ 3.84
NFRKB-206ENST00000529319 ARAP1Q96P48 1450 aa39■■■■□ 3.83
NFRKB-206ENST00000529319 RUSC2Q8N2Y8 1516 aa38.91■■■■□ 3.82
NFRKB-206ENST00000529319 JPH4Q96JJ6 628 aa38.88■■■■□ 3.81
NFRKB-206ENST00000529319 SHROOM2Q13796 1616 aa38.83■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms