RNA–Protein interactions for RNA: ENST00000548177.5

CALCOCO1-209, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-209ENST00000548177 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.73
CALCOCO1-209ENST00000548177 ABCC9O60706 1549 aa23.83■■□□□ 1.41
CALCOCO1-209ENST00000548177 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
CALCOCO1-209ENST00000548177 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
CALCOCO1-209ENST00000548177 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
CALCOCO1-209ENST00000548177 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
CALCOCO1-209ENST00000548177 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
CALCOCO1-209ENST00000548177 NACADO15069 1562 aa22.16■■□□□ 1.14
CALCOCO1-209ENST00000548177 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
CALCOCO1-209ENST00000548177 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
CALCOCO1-209ENST00000548177 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
CALCOCO1-209ENST00000548177 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
CALCOCO1-209ENST00000548177 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
CALCOCO1-209ENST00000548177 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
CALCOCO1-209ENST00000548177 SCRIBQ14160 1630 aa21.32■■□□□ 1
CALCOCO1-209ENST00000548177 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
CALCOCO1-209ENST00000548177 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
CALCOCO1-209ENST00000548177 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
CALCOCO1-209ENST00000548177 DNAJC5Q9H3Z4 198 aa21.13■□□□□ 0.97
CALCOCO1-209ENST00000548177 CUX2O14529 1486 aa20.6■□□□□ 0.89
CALCOCO1-209ENST00000548177 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
CALCOCO1-209ENST00000548177 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
CALCOCO1-209ENST00000548177 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
CALCOCO1-209ENST00000548177 NESP48681 1621 aa20.35■□□□□ 0.85
CALCOCO1-209ENST00000548177 SMARCA2P51531 1590 aa20.28■□□□□ 0.84
CALCOCO1-209ENST00000548177 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
CALCOCO1-209ENST00000548177 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
CALCOCO1-209ENST00000548177 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
CALCOCO1-209ENST00000548177 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
CALCOCO1-209ENST00000548177 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
CALCOCO1-209ENST00000548177 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
CALCOCO1-209ENST00000548177 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
CALCOCO1-209ENST00000548177 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
CALCOCO1-209ENST00000548177 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
CALCOCO1-209ENST00000548177 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
CALCOCO1-209ENST00000548177 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
CALCOCO1-209ENST00000548177 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
CALCOCO1-209ENST00000548177 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
CALCOCO1-209ENST00000548177 WDR62O43379 1518 aa19.76■□□□□ 0.75
CALCOCO1-209ENST00000548177 WIZO95785 1651 aa19.71■□□□□ 0.75
CALCOCO1-209ENST00000548177 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
CALCOCO1-209ENST00000548177 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
CALCOCO1-209ENST00000548177 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
CALCOCO1-209ENST00000548177 CFTRP13569 1480 aa19.51■□□□□ 0.71
CALCOCO1-209ENST00000548177 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
CALCOCO1-209ENST00000548177 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
CALCOCO1-209ENST00000548177 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
CALCOCO1-209ENST00000548177 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
CALCOCO1-209ENST00000548177 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
CALCOCO1-209ENST00000548177 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
CALCOCO1-209ENST00000548177 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
CALCOCO1-209ENST00000548177 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
CALCOCO1-209ENST00000548177 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.68
CALCOCO1-209ENST00000548177 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
CALCOCO1-209ENST00000548177 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
CALCOCO1-209ENST00000548177 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
CALCOCO1-209ENST00000548177 TOPBP1Q92547 1522 aa19.22■□□□□ 0.67
CALCOCO1-209ENST00000548177 FBLN2P98095 1184 aa19.2■□□□□ 0.66
CALCOCO1-209ENST00000548177 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
CALCOCO1-209ENST00000548177 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
CALCOCO1-209ENST00000548177 CHD1O14646 1710 aa19.19■□□□□ 0.66
CALCOCO1-209ENST00000548177 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■■■ 31.2
CALCOCO1-209ENST00000548177 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
CALCOCO1-209ENST00000548177 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
CALCOCO1-209ENST00000548177 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
CALCOCO1-209ENST00000548177 TARBP1Q13395 1621 aaKnown RBP19.06■□□□□ 0.64
CALCOCO1-209ENST00000548177 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
CALCOCO1-209ENST00000548177 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
CALCOCO1-209ENST00000548177 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
CALCOCO1-209ENST00000548177 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
CALCOCO1-209ENST00000548177 SOGA1O94964 1423 aa18.94■□□□□ 0.62
CALCOCO1-209ENST00000548177 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
CALCOCO1-209ENST00000548177 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
CALCOCO1-209ENST00000548177 SYNJ1O43426 1573 aa18.86■□□□□ 0.61
CALCOCO1-209ENST00000548177 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
CALCOCO1-209ENST00000548177 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
CALCOCO1-209ENST00000548177 MAGI1Q96QZ7 1491 aaPredicted RBP18.8■□□□□ 0.6
CALCOCO1-209ENST00000548177 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
CALCOCO1-209ENST00000548177 GRIN2BQ13224 1484 aa18.77■□□□□ 0.6
CALCOCO1-209ENST00000548177 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
CALCOCO1-209ENST00000548177 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
CALCOCO1-209ENST00000548177 CUX1P39880 1505 aa18.74■□□□□ 0.59
CALCOCO1-209ENST00000548177 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
CALCOCO1-209ENST00000548177 ERCC6L2Q5T890 1561 aa18.6■□□□□ 0.57
CALCOCO1-209ENST00000548177 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
CALCOCO1-209ENST00000548177 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
CALCOCO1-209ENST00000548177 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
CALCOCO1-209ENST00000548177 CEP170Q5SW79 1584 aa18.52■□□□□ 0.56
CALCOCO1-209ENST00000548177 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
CALCOCO1-209ENST00000548177 NUP160Q12769 1436 aa18.46■□□□□ 0.55
CALCOCO1-209ENST00000548177 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
CALCOCO1-209ENST00000548177 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
CALCOCO1-209ENST00000548177 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
CALCOCO1-209ENST00000548177 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
CALCOCO1-209ENST00000548177 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
CALCOCO1-209ENST00000548177 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
CALCOCO1-209ENST00000548177 FAM69CQ0P6D2 419 aa18.38■□□□□ 0.53
CALCOCO1-209ENST00000548177 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
CALCOCO1-209ENST00000548177 JPH4Q96JJ6 628 aa18.37■□□□□ 0.53
CALCOCO1-209ENST00000548177 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms