RNA–Protein interactions for RNA: ENST00000549784.5

CALCOCO1-216, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-216ENST00000549784 NISCHQ9Y2I1 1504 aa24.42■■□□□ 1.5
CALCOCO1-216ENST00000549784 ABCC9O60706 1549 aa22.19■■□□□ 1.14
CALCOCO1-216ENST00000549784 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
CALCOCO1-216ENST00000549784 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
CALCOCO1-216ENST00000549784 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
CALCOCO1-216ENST00000549784 NACADO15069 1562 aa20.76■□□□□ 0.91
CALCOCO1-216ENST00000549784 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
CALCOCO1-216ENST00000549784 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
CALCOCO1-216ENST00000549784 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
CALCOCO1-216ENST00000549784 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
CALCOCO1-216ENST00000549784 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
CALCOCO1-216ENST00000549784 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
CALCOCO1-216ENST00000549784 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
CALCOCO1-216ENST00000549784 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
CALCOCO1-216ENST00000549784 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
CALCOCO1-216ENST00000549784 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
CALCOCO1-216ENST00000549784 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
CALCOCO1-216ENST00000549784 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
CALCOCO1-216ENST00000549784 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
CALCOCO1-216ENST00000549784 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
CALCOCO1-216ENST00000549784 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
CALCOCO1-216ENST00000549784 CUX2O14529 1486 aa19.1■□□□□ 0.65
CALCOCO1-216ENST00000549784 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
CALCOCO1-216ENST00000549784 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
CALCOCO1-216ENST00000549784 NESP48681 1621 aa19.04■□□□□ 0.64
CALCOCO1-216ENST00000549784 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
CALCOCO1-216ENST00000549784 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
CALCOCO1-216ENST00000549784 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
CALCOCO1-216ENST00000549784 BAZ1AQ9NRL2 1556 aaPredicted RBP18.92■□□□□ 0.62
CALCOCO1-216ENST00000549784 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
CALCOCO1-216ENST00000549784 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
CALCOCO1-216ENST00000549784 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
CALCOCO1-216ENST00000549784 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
CALCOCO1-216ENST00000549784 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
CALCOCO1-216ENST00000549784 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
CALCOCO1-216ENST00000549784 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
CALCOCO1-216ENST00000549784 WIZO95785 1651 aa18.59■□□□□ 0.57
CALCOCO1-216ENST00000549784 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
CALCOCO1-216ENST00000549784 WDR62O43379 1518 aa18.5■□□□□ 0.55
CALCOCO1-216ENST00000549784 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
CALCOCO1-216ENST00000549784 FANCD2Q9BXW9 1451 aa18.42■□□□□ 0.54
CALCOCO1-216ENST00000549784 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
CALCOCO1-216ENST00000549784 RSF1Q96T23 1441 aaPredicted RBP18.41■□□□□ 0.54
CALCOCO1-216ENST00000549784 CFTRP13569 1480 aa18.39■□□□□ 0.54
CALCOCO1-216ENST00000549784 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
CALCOCO1-216ENST00000549784 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
CALCOCO1-216ENST00000549784 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
CALCOCO1-216ENST00000549784 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
CALCOCO1-216ENST00000549784 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO1-216ENST00000549784 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
CALCOCO1-216ENST00000549784 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
CALCOCO1-216ENST00000549784 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
CALCOCO1-216ENST00000549784 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
CALCOCO1-216ENST00000549784 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
CALCOCO1-216ENST00000549784 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
CALCOCO1-216ENST00000549784 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
CALCOCO1-216ENST00000549784 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.461e-6■■■■■ 31.2
CALCOCO1-216ENST00000549784 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
CALCOCO1-216ENST00000549784 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
CALCOCO1-216ENST00000549784 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
CALCOCO1-216ENST00000549784 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
CALCOCO1-216ENST00000549784 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
CALCOCO1-216ENST00000549784 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
CALCOCO1-216ENST00000549784 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
CALCOCO1-216ENST00000549784 FBLN2P98095 1184 aa17.84■□□□□ 0.45
CALCOCO1-216ENST00000549784 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
CALCOCO1-216ENST00000549784 CHD1O14646 1710 aa17.82■□□□□ 0.44
CALCOCO1-216ENST00000549784 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
CALCOCO1-216ENST00000549784 SOGA1O94964 1423 aa17.79■□□□□ 0.44
CALCOCO1-216ENST00000549784 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
CALCOCO1-216ENST00000549784 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
CALCOCO1-216ENST00000549784 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
CALCOCO1-216ENST00000549784 CUX1P39880 1505 aa17.71■□□□□ 0.43
CALCOCO1-216ENST00000549784 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
CALCOCO1-216ENST00000549784 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
CALCOCO1-216ENST00000549784 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
CALCOCO1-216ENST00000549784 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
CALCOCO1-216ENST00000549784 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
CALCOCO1-216ENST00000549784 SYNJ2O15056 1496 aa17.58■□□□□ 0.41
CALCOCO1-216ENST00000549784 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
CALCOCO1-216ENST00000549784 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
CALCOCO1-216ENST00000549784 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
CALCOCO1-216ENST00000549784 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
CALCOCO1-216ENST00000549784 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
CALCOCO1-216ENST00000549784 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
CALCOCO1-216ENST00000549784 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
CALCOCO1-216ENST00000549784 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
CALCOCO1-216ENST00000549784 WRNQ14191 1432 aaPredicted RBP eCLIP17.39■□□□□ 0.38
CALCOCO1-216ENST00000549784 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
CALCOCO1-216ENST00000549784 NUP160Q12769 1436 aa17.37■□□□□ 0.37
CALCOCO1-216ENST00000549784 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
CALCOCO1-216ENST00000549784 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
CALCOCO1-216ENST00000549784 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
CALCOCO1-216ENST00000549784 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
CALCOCO1-216ENST00000549784 SHROOM2Q13796 1616 aa17.28■□□□□ 0.36
CALCOCO1-216ENST00000549784 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
CALCOCO1-216ENST00000549784 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
CALCOCO1-216ENST00000549784 PRG4Q92954 1404 aaPredicted RBP17.23■□□□□ 0.35
CALCOCO1-216ENST00000549784 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
CALCOCO1-216ENST00000549784 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms