RNA–Protein interactions for RNA: ENST00000549349.5

CALCOCO1-213, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-213ENST00000549349 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
CALCOCO1-213ENST00000549349 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
CALCOCO1-213ENST00000549349 ABCC9O60706 1549 aa19.53■□□□□ 0.72
CALCOCO1-213ENST00000549349 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
CALCOCO1-213ENST00000549349 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
CALCOCO1-213ENST00000549349 NACADO15069 1562 aa18.85■□□□□ 0.61
CALCOCO1-213ENST00000549349 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
CALCOCO1-213ENST00000549349 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
CALCOCO1-213ENST00000549349 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
CALCOCO1-213ENST00000549349 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
CALCOCO1-213ENST00000549349 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
CALCOCO1-213ENST00000549349 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
CALCOCO1-213ENST00000549349 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
CALCOCO1-213ENST00000549349 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
CALCOCO1-213ENST00000549349 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
CALCOCO1-213ENST00000549349 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
CALCOCO1-213ENST00000549349 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
CALCOCO1-213ENST00000549349 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
CALCOCO1-213ENST00000549349 SMARCA4P51532 1647 aa17.67■□□□□ 0.42
CALCOCO1-213ENST00000549349 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
CALCOCO1-213ENST00000549349 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
CALCOCO1-213ENST00000549349 WIZO95785 1651 aa17.52■□□□□ 0.39
CALCOCO1-213ENST00000549349 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
CALCOCO1-213ENST00000549349 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
CALCOCO1-213ENST00000549349 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
CALCOCO1-213ENST00000549349 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
CALCOCO1-213ENST00000549349 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
CALCOCO1-213ENST00000549349 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.37
CALCOCO1-213ENST00000549349 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
CALCOCO1-213ENST00000549349 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
CALCOCO1-213ENST00000549349 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
CALCOCO1-213ENST00000549349 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
CALCOCO1-213ENST00000549349 NESP48681 1621 aa17.01■□□□□ 0.31
CALCOCO1-213ENST00000549349 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
CALCOCO1-213ENST00000549349 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
CALCOCO1-213ENST00000549349 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.3
CALCOCO1-213ENST00000549349 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
CALCOCO1-213ENST00000549349 CFTRP13569 1480 aa16.86■□□□□ 0.29
CALCOCO1-213ENST00000549349 ERCC6Q03468 1493 aa16.76■□□□□ 0.27
CALCOCO1-213ENST00000549349 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
CALCOCO1-213ENST00000549349 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
CALCOCO1-213ENST00000549349 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
CALCOCO1-213ENST00000549349 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
CALCOCO1-213ENST00000549349 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
CALCOCO1-213ENST00000549349 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
CALCOCO1-213ENST00000549349 ABCC8Q09428 1581 aa16.57■□□□□ 0.24
CALCOCO1-213ENST00000549349 WDR62O43379 1518 aa16.54■□□□□ 0.24
CALCOCO1-213ENST00000549349 CUX1P39880 1505 aa16.51■□□□□ 0.23
CALCOCO1-213ENST00000549349 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
CALCOCO1-213ENST00000549349 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
CALCOCO1-213ENST00000549349 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
CALCOCO1-213ENST00000549349 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
CALCOCO1-213ENST00000549349 CUX2O14529 1486 aa16.44■□□□□ 0.22
CALCOCO1-213ENST00000549349 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
CALCOCO1-213ENST00000549349 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
CALCOCO1-213ENST00000549349 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
CALCOCO1-213ENST00000549349 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
CALCOCO1-213ENST00000549349 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
CALCOCO1-213ENST00000549349 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
CALCOCO1-213ENST00000549349 SOGA1O94964 1423 aa16.31■□□□□ 0.2
CALCOCO1-213ENST00000549349 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
CALCOCO1-213ENST00000549349 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
CALCOCO1-213ENST00000549349 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
CALCOCO1-213ENST00000549349 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
CALCOCO1-213ENST00000549349 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
CALCOCO1-213ENST00000549349 EIF4G3O43432 1585 aaKnown RBP16.22■□□□□ 0.19
CALCOCO1-213ENST00000549349 TDRD9Q8NDG6 1382 aaKnown RBP16.22■□□□□ 0.19
CALCOCO1-213ENST00000549349 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■■■■ 31.2
CALCOCO1-213ENST00000549349 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
CALCOCO1-213ENST00000549349 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
CALCOCO1-213ENST00000549349 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
CALCOCO1-213ENST00000549349 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
CALCOCO1-213ENST00000549349 RUSC2Q8N2Y8 1516 aa16.13■□□□□ 0.17
CALCOCO1-213ENST00000549349 CHD1O14646 1710 aa16.06■□□□□ 0.16
CALCOCO1-213ENST00000549349 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
CALCOCO1-213ENST00000549349 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
CALCOCO1-213ENST00000549349 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
CALCOCO1-213ENST00000549349 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
CALCOCO1-213ENST00000549349 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
CALCOCO1-213ENST00000549349 IGF1RP08069 1367 aa16■□□□□ 0.15
CALCOCO1-213ENST00000549349 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
CALCOCO1-213ENST00000549349 FBLN2P98095 1184 aa15.98■□□□□ 0.15
CALCOCO1-213ENST00000549349 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
CALCOCO1-213ENST00000549349 CUL7Q14999 1698 aa15.95■□□□□ 0.14
CALCOCO1-213ENST00000549349 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
CALCOCO1-213ENST00000549349 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
CALCOCO1-213ENST00000549349 FHAD1B1AJZ9 1412 aa15.92■□□□□ 0.14
CALCOCO1-213ENST00000549349 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
CALCOCO1-213ENST00000549349 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
CALCOCO1-213ENST00000549349 EEA1Q15075 1411 aa15.87■□□□□ 0.13
CALCOCO1-213ENST00000549349 GRIN2AQ12879 1464 aa15.87■□□□□ 0.13
CALCOCO1-213ENST00000549349 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
CALCOCO1-213ENST00000549349 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
CALCOCO1-213ENST00000549349 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
CALCOCO1-213ENST00000549349 PRXQ9BXM0 1461 aa15.83■□□□□ 0.12
CALCOCO1-213ENST00000549349 RAPGEF2Q9Y4G8 1499 aa15.83■□□□□ 0.12
CALCOCO1-213ENST00000549349 CTTNBP2Q8WZ74 1663 aa15.78■□□□□ 0.12
CALCOCO1-213ENST00000549349 KIF21BO75037 1637 aa15.78■□□□□ 0.12
CALCOCO1-213ENST00000549349 NUP160Q12769 1436 aa15.77■□□□□ 0.12
CALCOCO1-213ENST00000549349 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms