RNA–Protein interactions for RNA: ENST00000430117.6

CALCOCO1-202, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5 BASIC

Gene CALCOCO1, Length 2,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-202ENST00000430117 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
CALCOCO1-202ENST00000430117 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
CALCOCO1-202ENST00000430117 HRCP23327 699 aa18.73■□□□□ 0.59
CALCOCO1-202ENST00000430117 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
CALCOCO1-202ENST00000430117 MYT1Q01538 1121 aa18.38■□□□□ 0.53
CALCOCO1-202ENST00000430117 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
CALCOCO1-202ENST00000430117 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
CALCOCO1-202ENST00000430117 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.39
CALCOCO1-202ENST00000430117 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
CALCOCO1-202ENST00000430117 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
CALCOCO1-202ENST00000430117 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-202ENST00000430117 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-202ENST00000430117 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
CALCOCO1-202ENST00000430117 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
CALCOCO1-202ENST00000430117 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO1-202ENST00000430117 FAM9AQ8IZU1 332 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO1-202ENST00000430117 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
CALCOCO1-202ENST00000430117 PRKCSHP14314 528 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO1-202ENST00000430117 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
CALCOCO1-202ENST00000430117 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
CALCOCO1-202ENST00000430117 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
CALCOCO1-202ENST00000430117 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
CALCOCO1-202ENST00000430117 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
CALCOCO1-202ENST00000430117 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
CALCOCO1-202ENST00000430117 ABCC9O60706 1549 aa17.09■□□□□ 0.33
CALCOCO1-202ENST00000430117 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
CALCOCO1-202ENST00000430117 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
CALCOCO1-202ENST00000430117 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
CALCOCO1-202ENST00000430117 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
CALCOCO1-202ENST00000430117 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
CALCOCO1-202ENST00000430117 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
CALCOCO1-202ENST00000430117 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
CALCOCO1-202ENST00000430117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO1-202ENST00000430117 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
CALCOCO1-202ENST00000430117 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
CALCOCO1-202ENST00000430117 APLP2Q06481 763 aa16.47■□□□□ 0.23
CALCOCO1-202ENST00000430117 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
CALCOCO1-202ENST00000430117 NACADO15069 1562 aa16.42■□□□□ 0.22
CALCOCO1-202ENST00000430117 MIER1Q8N108 512 aa16.4■□□□□ 0.22
CALCOCO1-202ENST00000430117 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.22
CALCOCO1-202ENST00000430117 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
CALCOCO1-202ENST00000430117 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
CALCOCO1-202ENST00000430117 ANO8Q9HCE9 1232 aaPredicted RBP16.36■□□□□ 0.21
CALCOCO1-202ENST00000430117 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
CALCOCO1-202ENST00000430117 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
CALCOCO1-202ENST00000430117 BCANQ96GW7 911 aa16.21■□□□□ 0.19
CALCOCO1-202ENST00000430117 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
CALCOCO1-202ENST00000430117 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
CALCOCO1-202ENST00000430117 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO1-202ENST00000430117 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-202ENST00000430117 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
CALCOCO1-202ENST00000430117 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
CALCOCO1-202ENST00000430117 MSH5O43196 834 aa16.03■□□□□ 0.16
CALCOCO1-202ENST00000430117 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
CALCOCO1-202ENST00000430117 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
CALCOCO1-202ENST00000430117 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
CALCOCO1-202ENST00000430117 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
CALCOCO1-202ENST00000430117 ITGAEP38570 1179 aa15.92■□□□□ 0.14
CALCOCO1-202ENST00000430117 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
CALCOCO1-202ENST00000430117 FKBP8Q14318 412 aa15.91■□□□□ 0.14
CALCOCO1-202ENST00000430117 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
CALCOCO1-202ENST00000430117 UBE2Q2Q8WVN8 375 aa15.85■□□□□ 0.13
CALCOCO1-202ENST00000430117 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
CALCOCO1-202ENST00000430117 WIZO95785 1651 aa15.79■□□□□ 0.12
CALCOCO1-202ENST00000430117 NBR1Q14596 966 aa15.75■□□□□ 0.11
CALCOCO1-202ENST00000430117 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
CALCOCO1-202ENST00000430117 EIF5BO60841 1220 aaKnown RBP15.72■□□□□ 0.11
CALCOCO1-202ENST00000430117 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
CALCOCO1-202ENST00000430117 IL27Q8NEV9 243 aa15.71■□□□□ 0.11
CALCOCO1-202ENST00000430117 NEFLP07196 543 aa15.67■□□□□ 0.1
CALCOCO1-202ENST00000430117 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
CALCOCO1-202ENST00000430117 SMARCA4P51532 1647 aa15.64■□□□□ 0.09
CALCOCO1-202ENST00000430117 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
CALCOCO1-202ENST00000430117 FANCIQ9NVI1 1328 aa15.62■□□□□ 0.09
CALCOCO1-202ENST00000430117 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
CALCOCO1-202ENST00000430117 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
CALCOCO1-202ENST00000430117 PKNOX2Q96KN3 472 aa15.59■□□□□ 0.09
CALCOCO1-202ENST00000430117 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
CALCOCO1-202ENST00000430117 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
CALCOCO1-202ENST00000430117 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 TRIM52Q96A61 297 aa15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 PAK3O75914 559 aaPredicted RBP15.45■□□□□ 0.06
CALCOCO1-202ENST00000430117 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
CALCOCO1-202ENST00000430117 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
CALCOCO1-202ENST00000430117 RTL5Q5HYW3 569 aaPredicted RBP15.44■□□□□ 0.06
CALCOCO1-202ENST00000430117 NOP58Q9Y2X3 529 aaKnown RBP15.42■□□□□ 0.06
CALCOCO1-202ENST00000430117 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
CALCOCO1-202ENST00000430117 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
CALCOCO1-202ENST00000430117 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
CALCOCO1-202ENST00000430117 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
CALCOCO1-202ENST00000430117 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
CALCOCO1-202ENST00000430117 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
CALCOCO1-202ENST00000430117 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
CALCOCO1-202ENST00000430117 BAZ1BQ9UIG0 1483 aaKnown RBP15.28■□□□□ 0.04
CALCOCO1-202ENST00000430117 DDX10Q13206 875 aaKnown RBP15.26■□□□□ 0.03
CALCOCO1-202ENST00000430117 BRPF3Q9ULD4 1205 aa15.23■□□□□ 0.03
CALCOCO1-202ENST00000430117 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
CALCOCO1-202ENST00000430117 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 764 ms