RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 DCAF8L2P0C7V8 631 aa17.92■□□□□ 0.46
CALCOCO1-201ENST00000262059 PELP1Q8IZL8 1130 aaKnown RBP17.56■□□□□ 0.4
CALCOCO1-201ENST00000262059 MYT1Q01538 1121 aa17.33■□□□□ 0.36
CALCOCO1-201ENST00000262059 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
CALCOCO1-201ENST00000262059 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
CALCOCO1-201ENST00000262059 NISCHQ9Y2I1 1504 aa16.94■□□□□ 0.3
CALCOCO1-201ENST00000262059 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO1-201ENST00000262059 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
CALCOCO1-201ENST00000262059 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
CALCOCO1-201ENST00000262059 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
CALCOCO1-201ENST00000262059 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
CALCOCO1-201ENST00000262059 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
CALCOCO1-201ENST00000262059 ZEB1P37275 1124 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO1-201ENST00000262059 APLP2Q06481 763 aa16.47■□□□□ 0.23
CALCOCO1-201ENST00000262059 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
CALCOCO1-201ENST00000262059 NEFLP07196 543 aa16.34■□□□□ 0.21
CALCOCO1-201ENST00000262059 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
CALCOCO1-201ENST00000262059 HRCP23327 699 aa16.22■□□□□ 0.19
CALCOCO1-201ENST00000262059 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
CALCOCO1-201ENST00000262059 DAXXQ9UER7 740 aaPredicted RBP15.93■□□□□ 0.14
CALCOCO1-201ENST00000262059 RTL5Q5HYW3 569 aaPredicted RBP15.89■□□□□ 0.13
CALCOCO1-201ENST00000262059 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
CALCOCO1-201ENST00000262059 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
CALCOCO1-201ENST00000262059 RANGAP1P46060 587 aaPredicted RBP15.8■□□□□ 0.12
CALCOCO1-201ENST00000262059 TRIM41Q8WV44 630 aa15.78■□□□□ 0.12
CALCOCO1-201ENST00000262059 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
CALCOCO1-201ENST00000262059 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
CALCOCO1-201ENST00000262059 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
CALCOCO1-201ENST00000262059 BCANQ96GW7 911 aa15.65■□□□□ 0.1
CALCOCO1-201ENST00000262059 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
CALCOCO1-201ENST00000262059 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
CALCOCO1-201ENST00000262059 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
CALCOCO1-201ENST00000262059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
CALCOCO1-201ENST00000262059 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
CALCOCO1-201ENST00000262059 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
CALCOCO1-201ENST00000262059 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
CALCOCO1-201ENST00000262059 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
CALCOCO1-201ENST00000262059 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
CALCOCO1-201ENST00000262059 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
CALCOCO1-201ENST00000262059 HNRNPUL2Q1KMD3 747 aaKnown RBP15.33■□□□□ 0.04
CALCOCO1-201ENST00000262059 GLIPR1L2Q4G1C9 344 aa15.32■□□□□ 0.04
CALCOCO1-201ENST00000262059 ITGAEP38570 1179 aa15.3■□□□□ 0.04
CALCOCO1-201ENST00000262059 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
CALCOCO1-201ENST00000262059 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
CALCOCO1-201ENST00000262059 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
CALCOCO1-201ENST00000262059 NBR1Q14596 966 aa15.13■□□□□ 0.01
CALCOCO1-201ENST00000262059 NPM2Q86SE8 214 aaKnown RBP15.13■□□□□ 0.01
CALCOCO1-201ENST00000262059 NEUROD1Q13562 356 aa15.1■□□□□ 0.01
CALCOCO1-201ENST00000262059 FKBP8Q14318 412 aa15.04■□□□□ -0
CALCOCO1-201ENST00000262059 BCL11AQ9H165 835 aa15.02□□□□□ -0.01
CALCOCO1-201ENST00000262059 ANP32CO43423 234 aa15□□□□□ -0.01
CALCOCO1-201ENST00000262059 ANP32EQ9BTT0 268 aa14.98□□□□□ -0.01
CALCOCO1-201ENST00000262059 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
CALCOCO1-201ENST00000262059 ARXQ96QS3 562 aa14.91□□□□□ -0.02
CALCOCO1-201ENST00000262059 ANP32BQ92688 251 aaKnown RBP14.87□□□□□ -0.03
CALCOCO1-201ENST00000262059 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
CALCOCO1-201ENST00000262059 ZBTB47Q9UFB7 747 aaPredicted RBP14.85□□□□□ -0.03
CALCOCO1-201ENST00000262059 FAM50AQ14320 339 aaKnown RBP14.81□□□□□ -0.04
CALCOCO1-201ENST00000262059 TRIM52Q96A61 297 aa14.78□□□□□ -0.04
CALCOCO1-201ENST00000262059 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
CALCOCO1-201ENST00000262059 FBLN2P98095 1184 aa14.69□□□□□ -0.06
CALCOCO1-201ENST00000262059 HSP90AA1P07900 732 aaKnown RBP14.67□□□□□ -0.06
CALCOCO1-201ENST00000262059 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
CALCOCO1-201ENST00000262059 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
CALCOCO1-201ENST00000262059 ZNF326Q5BKZ1 582 aaKnown RBP14.62□□□□□ -0.07
CALCOCO1-201ENST00000262059 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
CALCOCO1-201ENST00000262059 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
CALCOCO1-201ENST00000262059 CCDC136Q96JN2 1154 aa14.62□□□□□ -0.07
CALCOCO1-201ENST00000262059 NAP1L5Q96NT1 182 aaPredicted RBP14.62□□□□□ -0.07
CALCOCO1-201ENST00000262059 MIER1Q8N108 512 aa14.61□□□□□ -0.07
CALCOCO1-201ENST00000262059 NEFMP07197 916 aa14.59□□□□□ -0.07
CALCOCO1-201ENST00000262059 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
CALCOCO1-201ENST00000262059 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
CALCOCO1-201ENST00000262059 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
CALCOCO1-201ENST00000262059 TRIM44Q96DX7 344 aaPredicted RBP14.55□□□□□ -0.08
CALCOCO1-201ENST00000262059 DEKP35659 375 aaKnown RBP14.54□□□□□ -0.08
CALCOCO1-201ENST00000262059 FAM9BQ8IZU0 186 aa14.54□□□□□ -0.08
CALCOCO1-201ENST00000262059 DDX10Q13206 875 aaKnown RBP14.53□□□□□ -0.08
CALCOCO1-201ENST00000262059 ERICH6BQ5W0A0 696 aa14.53□□□□□ -0.08
CALCOCO1-201ENST00000262059 ABCC9O60706 1549 aa14.5□□□□□ -0.09
CALCOCO1-201ENST00000262059 CDK11BP21127 795 aaKnown RBP14.49□□□□□ -0.09
CALCOCO1-201ENST00000262059 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
CALCOCO1-201ENST00000262059 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
CALCOCO1-201ENST00000262059 LAS1LQ9Y4W2 734 aaKnown RBP14.48□□□□□ -0.09
CALCOCO1-201ENST00000262059 ESF1Q9H501 851 aaKnown RBP14.48□□□□□ -0.09
CALCOCO1-201ENST00000262059 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
CALCOCO1-201ENST00000262059 SALL2Q9Y467 1007 aaPredicted RBP14.47□□□□□ -0.09
CALCOCO1-201ENST00000262059 PLPPR3Q6T4P5 718 aa14.43□□□□□ -0.1
CALCOCO1-201ENST00000262059 NOP58Q9Y2X3 529 aaKnown RBP14.43□□□□□ -0.1
CALCOCO1-201ENST00000262059 DDRGK1Q96HY6 314 aa14.42□□□□□ -0.1
CALCOCO1-201ENST00000262059 ARID4BQ4LE39 1312 aaPredicted RBP14.41□□□□□ -0.1
CALCOCO1-201ENST00000262059 SUPT16HQ9Y5B9 1047 aaKnown RBP14.4□□□□□ -0.1
CALCOCO1-201ENST00000262059 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
CALCOCO1-201ENST00000262059 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
CALCOCO1-201ENST00000262059 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
CALCOCO1-201ENST00000262059 PTMAP06454 111 aaKnown RBP14.32□□□□□ -0.12
CALCOCO1-201ENST00000262059 BECN1Q14457 450 aa14.32□□□□□ -0.12
CALCOCO1-201ENST00000262059 NCLP19338 710 aaKnown RBP14.3□□□□□ -0.12
CALCOCO1-201ENST00000262059 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
CALCOCO1-201ENST00000262059 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms