RNA–Protein interactions for RNA: ENST00000398849.6

AC005562.1-202, humanhuman

TSL 2

Gene AC005562.1, Length 1,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005562.1-202ENST00000398849 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
AC005562.1-202ENST00000398849 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
AC005562.1-202ENST00000398849 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
AC005562.1-202ENST00000398849 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
AC005562.1-202ENST00000398849 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
AC005562.1-202ENST00000398849 FOXD1Q16676 465 aa21.55■■□□□ 1.04
AC005562.1-202ENST00000398849 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
AC005562.1-202ENST00000398849 MSH5O43196 834 aa20.44■□□□□ 0.86
AC005562.1-202ENST00000398849 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
AC005562.1-202ENST00000398849 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
AC005562.1-202ENST00000398849 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
AC005562.1-202ENST00000398849 ADRA2BP18089 450 aa19.72■□□□□ 0.75
AC005562.1-202ENST00000398849 CCDC180Q9P1Z9 1646 aa19.46■□□□□ 0.71
AC005562.1-202ENST00000398849 ABCC9O60706 1549 aa19.11■□□□□ 0.65
AC005562.1-202ENST00000398849 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
AC005562.1-202ENST00000398849 NACADO15069 1562 aa18.33■□□□□ 0.53
AC005562.1-202ENST00000398849 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
AC005562.1-202ENST00000398849 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
AC005562.1-202ENST00000398849 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
AC005562.1-202ENST00000398849 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
AC005562.1-202ENST00000398849 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
AC005562.1-202ENST00000398849 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
AC005562.1-202ENST00000398849 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
AC005562.1-202ENST00000398849 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
AC005562.1-202ENST00000398849 KCNA4P22459 653 aa17.89■□□□□ 0.45
AC005562.1-202ENST00000398849 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
AC005562.1-202ENST00000398849 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
AC005562.1-202ENST00000398849 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
AC005562.1-202ENST00000398849 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
AC005562.1-202ENST00000398849 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
AC005562.1-202ENST00000398849 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
AC005562.1-202ENST00000398849 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
AC005562.1-202ENST00000398849 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
AC005562.1-202ENST00000398849 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
AC005562.1-202ENST00000398849 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
AC005562.1-202ENST00000398849 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
AC005562.1-202ENST00000398849 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
AC005562.1-202ENST00000398849 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
AC005562.1-202ENST00000398849 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
AC005562.1-202ENST00000398849 NPM3O75607 178 aaKnown RBP17.3■□□□□ 0.36
AC005562.1-202ENST00000398849 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
AC005562.1-202ENST00000398849 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
AC005562.1-202ENST00000398849 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
AC005562.1-202ENST00000398849 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
AC005562.1-202ENST00000398849 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
AC005562.1-202ENST00000398849 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
AC005562.1-202ENST00000398849 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
AC005562.1-202ENST00000398849 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
AC005562.1-202ENST00000398849 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
AC005562.1-202ENST00000398849 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
AC005562.1-202ENST00000398849 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
AC005562.1-202ENST00000398849 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
AC005562.1-202ENST00000398849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.252e-6■■■□□ 17.5
AC005562.1-202ENST00000398849 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
AC005562.1-202ENST00000398849 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
AC005562.1-202ENST00000398849 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
AC005562.1-202ENST00000398849 CUX2O14529 1486 aa16.57■□□□□ 0.24
AC005562.1-202ENST00000398849 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
AC005562.1-202ENST00000398849 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
AC005562.1-202ENST00000398849 ZBTB22O15209 634 aa16.48■□□□□ 0.23
AC005562.1-202ENST00000398849 NESP48681 1621 aa16.46■□□□□ 0.23
AC005562.1-202ENST00000398849 WIZO95785 1651 aa16.41■□□□□ 0.22
AC005562.1-202ENST00000398849 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
AC005562.1-202ENST00000398849 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
AC005562.1-202ENST00000398849 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
AC005562.1-202ENST00000398849 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
AC005562.1-202ENST00000398849 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
AC005562.1-202ENST00000398849 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
AC005562.1-202ENST00000398849 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
AC005562.1-202ENST00000398849 TOP2AP11388 1531 aaKnown RBP16.27■□□□□ 0.2
AC005562.1-202ENST00000398849 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
AC005562.1-202ENST00000398849 CFTRP13569 1480 aa16.22■□□□□ 0.19
AC005562.1-202ENST00000398849 WDR62O43379 1518 aa16.21■□□□□ 0.19
AC005562.1-202ENST00000398849 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
AC005562.1-202ENST00000398849 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
AC005562.1-202ENST00000398849 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
AC005562.1-202ENST00000398849 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
AC005562.1-202ENST00000398849 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
AC005562.1-202ENST00000398849 CAPN15O75808 1086 aa16.11■□□□□ 0.17
AC005562.1-202ENST00000398849 DSG3P32926 999 aa16.08■□□□□ 0.16
AC005562.1-202ENST00000398849 POTEHQ6S545 545 aa16.04■□□□□ 0.16
AC005562.1-202ENST00000398849 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
AC005562.1-202ENST00000398849 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
AC005562.1-202ENST00000398849 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
AC005562.1-202ENST00000398849 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
AC005562.1-202ENST00000398849 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
AC005562.1-202ENST00000398849 APLP2Q06481 763 aa15.87■□□□□ 0.13
AC005562.1-202ENST00000398849 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
AC005562.1-202ENST00000398849 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
AC005562.1-202ENST00000398849 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
AC005562.1-202ENST00000398849 ATXN8OSP0DMR3 200 aa15.76■□□□□ 0.11
AC005562.1-202ENST00000398849 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
AC005562.1-202ENST00000398849 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
AC005562.1-202ENST00000398849 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
AC005562.1-202ENST00000398849 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
AC005562.1-202ENST00000398849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
AC005562.1-202ENST00000398849 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
AC005562.1-202ENST00000398849 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
AC005562.1-202ENST00000398849 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
AC005562.1-202ENST00000398849 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms