RNA–Protein interactions for RNA: ENST00000547885.5

CALCOCO1-206, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-206ENST00000547885 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
CALCOCO1-206ENST00000547885 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
CALCOCO1-206ENST00000547885 ABCC9O60706 1549 aa13.63□□□□□ -0.23
CALCOCO1-206ENST00000547885 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
CALCOCO1-206ENST00000547885 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
CALCOCO1-206ENST00000547885 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
CALCOCO1-206ENST00000547885 NACADO15069 1562 aa13.06□□□□□ -0.32
CALCOCO1-206ENST00000547885 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.33
CALCOCO1-206ENST00000547885 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
CALCOCO1-206ENST00000547885 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
CALCOCO1-206ENST00000547885 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
CALCOCO1-206ENST00000547885 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
CALCOCO1-206ENST00000547885 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
CALCOCO1-206ENST00000547885 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
CALCOCO1-206ENST00000547885 CECR2Q9BXF3 1484 aa12.41□□□□□ -0.42
CALCOCO1-206ENST00000547885 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
CALCOCO1-206ENST00000547885 EIF4G1Q04637 1599 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-206ENST00000547885 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
CALCOCO1-206ENST00000547885 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
CALCOCO1-206ENST00000547885 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-206ENST00000547885 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
CALCOCO1-206ENST00000547885 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
CALCOCO1-206ENST00000547885 WIZO95785 1651 aa12.22□□□□□ -0.45
CALCOCO1-206ENST00000547885 RSF1Q96T23 1441 aaPredicted RBP12.21□□□□□ -0.45
CALCOCO1-206ENST00000547885 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
CALCOCO1-206ENST00000547885 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
CALCOCO1-206ENST00000547885 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-206ENST00000547885 NCAPD3P42695 1498 aa12.03□□□□□ -0.48
CALCOCO1-206ENST00000547885 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
CALCOCO1-206ENST00000547885 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
CALCOCO1-206ENST00000547885 HMGXB3Q12766 1538 aa12□□□□□ -0.49
CALCOCO1-206ENST00000547885 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
CALCOCO1-206ENST00000547885 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
CALCOCO1-206ENST00000547885 NESP48681 1621 aa11.84□□□□□ -0.51
CALCOCO1-206ENST00000547885 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
CALCOCO1-206ENST00000547885 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
CALCOCO1-206ENST00000547885 LAMC3Q9Y6N6 1575 aa11.71□□□□□ -0.53
CALCOCO1-206ENST00000547885 CFTRP13569 1480 aa11.7□□□□□ -0.54
CALCOCO1-206ENST00000547885 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
CALCOCO1-206ENST00000547885 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
CALCOCO1-206ENST00000547885 PDS5BQ9NTI5 1447 aa11.67□□□□□ -0.54
CALCOCO1-206ENST00000547885 ABCC8Q09428 1581 aa11.65□□□□□ -0.54
CALCOCO1-206ENST00000547885 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
CALCOCO1-206ENST00000547885 PRDM2Q13029 1718 aa11.64□□□□□ -0.55
CALCOCO1-206ENST00000547885 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
CALCOCO1-206ENST00000547885 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
CALCOCO1-206ENST00000547885 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
CALCOCO1-206ENST00000547885 CHIC1Q5VXU3 224 aa11.53□□□□□ -0.56
CALCOCO1-206ENST00000547885 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
CALCOCO1-206ENST00000547885 CUX1P39880 1505 aa11.51□□□□□ -0.57
CALCOCO1-206ENST00000547885 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
CALCOCO1-206ENST00000547885 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
CALCOCO1-206ENST00000547885 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
CALCOCO1-206ENST00000547885 DNMBPQ6XZF7 1577 aa11.49□□□□□ -0.57
CALCOCO1-206ENST00000547885 FAM9AQ8IZU1 332 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO1-206ENST00000547885 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.57
CALCOCO1-206ENST00000547885 EHMT2Q96KQ7 1210 aa11.45□□□□□ -0.58
CALCOCO1-206ENST00000547885 WDR62O43379 1518 aa11.45□□□□□ -0.58
CALCOCO1-206ENST00000547885 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
CALCOCO1-206ENST00000547885 TOP2BQ02880 1626 aa11.44□□□□□ -0.58
CALCOCO1-206ENST00000547885 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
CALCOCO1-206ENST00000547885 SOGA1O94964 1423 aa11.42□□□□□ -0.58
CALCOCO1-206ENST00000547885 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
CALCOCO1-206ENST00000547885 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
CALCOCO1-206ENST00000547885 CUX2O14529 1486 aa11.37□□□□□ -0.59
CALCOCO1-206ENST00000547885 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
CALCOCO1-206ENST00000547885 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
CALCOCO1-206ENST00000547885 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.63e-6■■■■□ 24.7
CALCOCO1-206ENST00000547885 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
CALCOCO1-206ENST00000547885 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
CALCOCO1-206ENST00000547885 FBLN2P98095 1184 aa11.3□□□□□ -0.6
CALCOCO1-206ENST00000547885 KIF27Q86VH2 1401 aa11.28□□□□□ -0.6
CALCOCO1-206ENST00000547885 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
CALCOCO1-206ENST00000547885 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
CALCOCO1-206ENST00000547885 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
CALCOCO1-206ENST00000547885 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
CALCOCO1-206ENST00000547885 PBRM1Q86U86 1689 aa11.24□□□□□ -0.61
CALCOCO1-206ENST00000547885 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
CALCOCO1-206ENST00000547885 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
CALCOCO1-206ENST00000547885 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.61
CALCOCO1-206ENST00000547885 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
CALCOCO1-206ENST00000547885 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
CALCOCO1-206ENST00000547885 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO1-206ENST00000547885 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
CALCOCO1-206ENST00000547885 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
CALCOCO1-206ENST00000547885 IGF1RP08069 1367 aa11.17□□□□□ -0.62
CALCOCO1-206ENST00000547885 EEA1Q15075 1411 aa11.16□□□□□ -0.62
CALCOCO1-206ENST00000547885 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
CALCOCO1-206ENST00000547885 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
CALCOCO1-206ENST00000547885 ADAMTS12P58397 1594 aa11.12□□□□□ -0.63
CALCOCO1-206ENST00000547885 CHD1O14646 1710 aa11.12□□□□□ -0.63
CALCOCO1-206ENST00000547885 CUL7Q14999 1698 aa11.11□□□□□ -0.63
CALCOCO1-206ENST00000547885 FHAD1B1AJZ9 1412 aa11.11□□□□□ -0.63
CALCOCO1-206ENST00000547885 MAGI1Q96QZ7 1491 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO1-206ENST00000547885 RAPGEF2Q9Y4G8 1499 aa11.11□□□□□ -0.63
CALCOCO1-206ENST00000547885 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO1-206ENST00000547885 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
CALCOCO1-206ENST00000547885 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
CALCOCO1-206ENST00000547885 GRIN2AQ12879 1464 aa11.07□□□□□ -0.64
CALCOCO1-206ENST00000547885 PRXQ9BXM0 1461 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 251.4 ms