Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC12.68□□□□□ -0.381e-6■□□□□ 10.9
SFPQP23246 TJP2-205ENST00000423935 614 ntTSL 221.05■□□□□ 0.963e-6■□□□□ 10.9
SFPQP23246 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.523e-6■□□□□ 10.9
SFPQP23246 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.053e-6■□□□□ 10.9
SFPQP23246 TJP2-210ENST00000606364 591 ntTSL 413.69□□□□□ -0.223e-6■□□□□ 10.9
SFPQP23246 TJP2-203ENST00000377259 588 ntTSL 310.94□□□□□ -0.663e-6■□□□□ 10.9
SFPQP23246 PKP4-204ENST00000421462 3099 ntTSL 219.44■□□□□ 0.76e-7■□□□□ 10.9
SFPQP23246 PKP4-205ENST00000426248 4134 ntTSL 1 (best)18.32■□□□□ 0.526e-7■□□□□ 10.9
SFPQP23246 PKP4-206ENST00000452162 2359 ntTSL 1 (best)12.06□□□□□ -0.486e-7■□□□□ 10.9
SFPQP23246 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.526e-7■□□□□ 10.9
SFPQP23246 PKP4-203ENST00000411900 552 ntTSL 411.23□□□□□ -0.616e-7■□□□□ 10.9
SFPQP23246 PKP4-208ENST00000462335 561 ntTSL 410.64□□□□□ -0.716e-7■□□□□ 10.9
SFPQP23246 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.776e-7■□□□□ 10.9
SFPQP23246 PKP4-207ENST00000457109 520 ntTSL 39.92□□□□□ -0.826e-7■□□□□ 10.9
SFPQP23246 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.59□□□□□ -1.036e-7■□□□□ 10.9
SFPQP23246 ANKRD17-208ENST00000559367 539 ntTSL 58.22□□□□□ -1.091e-6■□□□□ 10.9
SFPQP23246 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.131e-6■□□□□ 10.9
SFPQP23246 ADGRG6-205ENST00000415128 1610 ntTSL 221.77■■□□□ 1.082e-8■□□□□ 10.9
SFPQP23246 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC15.43■□□□□ 0.062e-8■□□□□ 10.9
SFPQP23246 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.052e-8■□□□□ 10.9
SFPQP23246 ADGRG6-214ENST00000545477 657 ntTSL 512.76□□□□□ -0.372e-8■□□□□ 10.9
SFPQP23246 ADGRG6-206ENST00000435011 540 ntTSL 412.66□□□□□ -0.382e-8■□□□□ 10.9
SFPQP23246 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.632e-8■□□□□ 10.9
SFPQP23246 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC10.22□□□□□ -0.772e-8■□□□□ 10.9
SFPQP23246 ADGRG6-213ENST00000541199 844 ntTSL 48.65□□□□□ -1.022e-8■□□□□ 10.9
SFPQP23246 GMDS-210ENST00000533279 817 ntTSL 512.53□□□□□ -0.42e-6■□□□□ 10.9
SFPQP23246 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.532e-7■□□□□ 10.9
SFPQP23246 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.289e-14■□□□□ 10.8
SFPQP23246 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.799e-14■□□□□ 10.8
SFPQP23246 TAF15-203ENST00000603393 1214 ntTSL 1 (best)18.78■□□□□ 0.69e-14■□□□□ 10.8
SFPQP23246 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.399e-14■□□□□ 10.8
SFPQP23246 TAF15-212ENST00000604879 808 ntTSL 514.74□□□□□ -0.059e-14■□□□□ 10.8
SFPQP23246 TAF15-201ENST00000603067 580 ntTSL 57.33□□□□□ -1.249e-14■□□□□ 10.8
SFPQP23246 ADIPOR2-205ENST00000540974 480 ntTSL 315.24■□□□□ 0.032e-9■□□□□ 10.8
SFPQP23246 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.312e-9■□□□□ 10.8
SFPQP23246 ADIPOR2-204ENST00000537545 484 ntTSL 39.4□□□□□ -0.92e-9■□□□□ 10.8
SFPQP23246 EEF1D-244ENST00000532543 791 ntTSL 318.28■□□□□ 0.527e-8■□□□□ 10.8
SFPQP23246 EEF1D-242ENST00000531953 506 ntTSL 413.88□□□□□ -0.197e-8■□□□□ 10.8
SFPQP23246 EEF1D-213ENST00000526133 367 ntTSL 211.08□□□□□ -0.647e-8■□□□□ 10.8
SFPQP23246 CELF1-213ENST00000530151 583 ntTSL 324.31■■□□□ 1.483e-6■□□□□ 10.8
SFPQP23246 CELF1-210ENST00000526419 476 ntTSL 420.64■□□□□ 0.893e-6■□□□□ 10.8
SFPQP23246 CELF1-208ENST00000525841 622 ntTSL 516.48■□□□□ 0.233e-6■□□□□ 10.8
SFPQP23246 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.233e-6■□□□□ 10.8
SFPQP23246 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.47■□□□□ 0.233e-6■□□□□ 10.8
SFPQP23246 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.598e-7■□□□□ 10.8
SFPQP23246 ST3GAL2-204ENST00000566097 904 ntTSL 230.72■■■□□ 2.511e-6■□□□□ 10.8
SFPQP23246 ST3GAL2-205ENST00000567586 557 ntTSL 428.05■■■□□ 2.081e-6■□□□□ 10.8
SFPQP23246 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.338e-7■□□□□ 10.8
SFPQP23246 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.641e-6■□□□□ 10.8
SFPQP23246 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC9.05□□□□□ -0.964e-7■□□□□ 10.8
SFPQP23246 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.85■■□□□ 1.414e-7■□□□□ 10.8
SFPQP23246 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.657e-6■□□□□ 10.7
SFPQP23246 CCND1-206ENST00000545484 430 ntTSL 524.02■■□□□ 1.443e-9■□□□□ 10.7
SFPQP23246 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.67■□□□□ 0.583e-9■□□□□ 10.7
SFPQP23246 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.273e-9■□□□□ 10.7
SFPQP23246 CRIM1-205ENST00000473403 386 ntTSL 34.79□□□□□ -1.645e-8■□□□□ 10.7
SFPQP23246 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.137e-7■□□□□ 10.7
SFPQP23246 PLD1-205ENST00000440204 646 ntTSL 414.9□□□□□ -0.022e-6■□□□□ 10.7
SFPQP23246 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.38□□□□□ -1.232e-6■□□□□ 10.7
SFPQP23246 PLD1-216ENST00000498278 996 ntTSL 56.44□□□□□ -1.382e-6■□□□□ 10.7
SFPQP23246 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.482e-6■□□□□ 10.7
SFPQP23246 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.14■■□□□ 1.789e-8■□□□□ 10.7
SFPQP23246 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.65■■□□□ 1.549e-8■□□□□ 10.7
SFPQP23246 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.43■■□□□ 1.029e-8■□□□□ 10.7
SFPQP23246 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.02■□□□□ 0.329e-8■□□□□ 10.7
SFPQP23246 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.02■□□□□ 0.327e-7■□□□□ 10.7
SFPQP23246 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.17e-7■□□□□ 10.7
SFPQP23246 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC9.27□□□□□ -0.937e-7■□□□□ 10.7
SFPQP23246 EML4-208ENST00000482660 584 ntTSL 419.91■□□□□ 0.782e-6■□□□□ 10.7
SFPQP23246 EML4-205ENST00000409040 962 ntTSL 1 (best)19.05■□□□□ 0.642e-6■□□□□ 10.7
SFPQP23246 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.42e-6■□□□□ 10.7
SFPQP23246 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.232e-6■□□□□ 10.7
SFPQP23246 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.532e-6■□□□□ 10.7
SFPQP23246 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.038e-7■□□□□ 10.7
SFPQP23246 DHRS3-203ENST00000482265 1036 ntTSL 316.89■□□□□ 0.298e-7■□□□□ 10.7
SFPQP23246 DHRS3-202ENST00000464917 539 ntTSL 314.77□□□□□ -0.058e-7■□□□□ 10.7
SFPQP23246 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.193e-8■□□□□ 10.7
SFPQP23246 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.393e-8■□□□□ 10.7
SFPQP23246 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.133e-8■□□□□ 10.7
SFPQP23246 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.933e-8■□□□□ 10.7
SFPQP23246 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.943e-8■□□□□ 10.7
SFPQP23246 STXBP6-205ENST00000548182 3355 ntTSL 27.89□□□□□ -1.153e-8■□□□□ 10.7
SFPQP23246 FOXN3-210ENST00000555658 648 ntTSL 34.41□□□□□ -1.74e-6■□□□□ 10.6
SFPQP23246 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.554e-7■□□□□ 10.6
SFPQP23246 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.61■□□□□ 0.414e-7■□□□□ 10.6
SFPQP23246 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.28■□□□□ 0.24e-7■□□□□ 10.6
SFPQP23246 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.064e-7■□□□□ 10.6
SFPQP23246 SATB2-207ENST00000463386 372 ntTSL 412.25□□□□□ -0.454e-7■□□□□ 10.6
SFPQP23246 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.624e-7■□□□□ 10.6
SFPQP23246 USP34-204ENST00000453133 1409 ntTSL 55.82□□□□□ -1.484e-7■□□□□ 10.6
SFPQP23246 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.594e-7■□□□□ 10.6
SFPQP23246 PPP1CB-208ENST00000455580 721 ntTSL 326.83■■□□□ 1.892e-7■□□□□ 10.6
SFPQP23246 PPP1CB-205ENST00000420282 570 ntTSL 423.13■■□□□ 1.292e-7■□□□□ 10.6
SFPQP23246 PPP1CB-206ENST00000427786 569 ntTSL 421.87■■□□□ 1.092e-7■□□□□ 10.6
SFPQP23246 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.662e-7■□□□□ 10.6
SFPQP23246 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.32e-7■□□□□ 10.6
SFPQP23246 PPP1CB-207ENST00000441461 584 ntTSL 216.66■□□□□ 0.262e-7■□□□□ 10.6
SFPQP23246 PPP1CB-209ENST00000464273 577 ntTSL 215.55■□□□□ 0.082e-7■□□□□ 10.6
SFPQP23246 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.042e-7■□□□□ 10.6
SFPQP23246 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.153e-6■□□□□ 10.6
Retrieved 100 of 4,991 protein–RNA pairs in 251 ms