RNA–Protein interactions for RNA: ENST00000544604.6

ZNRF3-203, Transcript of zinc and ring finger 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNRF3, Length 6,851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3-203ENST00000544604 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
ZNRF3-203ENST00000544604 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.5
ZNRF3-203ENST00000544604 PELP1Q8IZL8 1130 aaKnown RBP30.35■■■□□ 2.45
ZNRF3-203ENST00000544604 EHMT2Q96KQ7 1210 aa30.13■■■□□ 2.41
ZNRF3-203ENST00000544604 SHROOM4Q9ULL8 1493 aa29.9■■■□□ 2.38
ZNRF3-203ENST00000544604 APLP2Q06481 763 aa29.47■■■□□ 2.31
ZNRF3-203ENST00000544604 ERICH6Q7L0X2 663 aa29.28■■■□□ 2.28
ZNRF3-203ENST00000544604 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
ZNRF3-203ENST00000544604 TTBK1Q5TCY1 1321 aaPredicted RBP29.2■■■□□ 2.27
ZNRF3-203ENST00000544604 PCGF6Q9BYE7 350 aa29.19■■■□□ 2.26
ZNRF3-203ENST00000544604 FAM9AQ8IZU1 332 aaPredicted RBP29.09■■■□□ 2.25
ZNRF3-203ENST00000544604 CENPBP07199 599 aaPredicted RBP29.07■■■□□ 2.24
ZNRF3-203ENST00000544604 CCER1Q8TC90 406 aaPredicted RBP28.98■■■□□ 2.23
ZNRF3-203ENST00000544604 ZEB1P37275 1124 aaPredicted RBP28.74■■■□□ 2.19
ZNRF3-203ENST00000544604 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
ZNRF3-203ENST00000544604 MYT1Q01538 1121 aa28.51■■■□□ 2.15
ZNRF3-203ENST00000544604 YTHDC1Q96MU7 727 aaKnown RBP28.51■■■□□ 2.15
ZNRF3-203ENST00000544604 NEFLP07196 543 aa28.48■■■□□ 2.15
ZNRF3-203ENST00000544604 ATP1B4Q9UN42 357 aaPredicted RBP28.37■■■□□ 2.13
ZNRF3-203ENST00000544604 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
ZNRF3-203ENST00000544604 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
ZNRF3-203ENST00000544604 PPARGC1BQ86YN6 1023 aaKnown RBP27.93■■■□□ 2.06
ZNRF3-203ENST00000544604 DAXXQ9UER7 740 aaPredicted RBP27.82■■■□□ 2.04
ZNRF3-203ENST00000544604 TRIM26Q12899 539 aaPredicted RBP27.69■■■□□ 2.02
ZNRF3-203ENST00000544604 HRCP23327 699 aa27.63■■■□□ 2.01
ZNRF3-203ENST00000544604 POLR3GLQ9BT43 218 aa27.57■■■□□ 2
ZNRF3-203ENST00000544604 ITGAEP38570 1179 aa27.47■■□□□ 1.99
ZNRF3-203ENST00000544604 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
ZNRF3-203ENST00000544604 HNRNPUL2Q1KMD3 747 aaKnown RBP27.25■■□□□ 1.95
ZNRF3-203ENST00000544604 RTL5Q5HYW3 569 aaPredicted RBP27.25■■□□□ 1.95
ZNRF3-203ENST00000544604 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
ZNRF3-203ENST00000544604 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
ZNRF3-203ENST00000544604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.17■■□□□ 1.94
ZNRF3-203ENST00000544604 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
ZNRF3-203ENST00000544604 CLSPNQ9HAW4 1339 aa27.07■■□□□ 1.92
ZNRF3-203ENST00000544604 DIEXFQ68CQ4 756 aaKnown RBP27.04■■□□□ 1.92
ZNRF3-203ENST00000544604 SLC4A1APQ9BWU0 796 aaKnown RBP26.98■■□□□ 1.91
ZNRF3-203ENST00000544604 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
ZNRF3-203ENST00000544604 BCANQ96GW7 911 aa26.83■■□□□ 1.89
ZNRF3-203ENST00000544604 GTF3C3Q9Y5Q9 886 aa26.73■■□□□ 1.87
ZNRF3-203ENST00000544604 FAM50AQ14320 339 aaKnown RBP26.63■■□□□ 1.85
ZNRF3-203ENST00000544604 CDK11AQ9UQ88 783 aaPredicted RBP26.6■■□□□ 1.85
ZNRF3-203ENST00000544604 NEUROD1Q13562 356 aa26.58■■□□□ 1.85
ZNRF3-203ENST00000544604 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
ZNRF3-203ENST00000544604 ANP32CO43423 234 aa26.48■■□□□ 1.83
ZNRF3-203ENST00000544604 ZBTB47Q9UFB7 747 aaPredicted RBP26.4■■□□□ 1.82
ZNRF3-203ENST00000544604 ZNF326Q5BKZ1 582 aaKnown RBP26.36■■□□□ 1.81
ZNRF3-203ENST00000544604 BCL11AQ9H165 835 aa26.3■■□□□ 1.8
ZNRF3-203ENST00000544604 CANXP27824 592 aaKnown RBP26.27■■□□□ 1.8
ZNRF3-203ENST00000544604 ANP32AP39687 249 aaKnown RBP26.2■■□□□ 1.78
ZNRF3-203ENST00000544604 ACIN1Q9UKV3 1341 aaKnown RBP26.18■■□□□ 1.78
ZNRF3-203ENST00000544604 NPM2Q86SE8 214 aaKnown RBP26.14■■□□□ 1.77
ZNRF3-203ENST00000544604 SLC24A1O60721 1099 aa26.12■■□□□ 1.77
ZNRF3-203ENST00000544604 EIF5BO60841 1220 aaKnown RBP26.06■■□□□ 1.76
ZNRF3-203ENST00000544604 NEFMP07197 916 aa25.94■■□□□ 1.74
ZNRF3-203ENST00000544604 FKBP8Q14318 412 aa25.89■■□□□ 1.74
ZNRF3-203ENST00000544604 ANP32BQ92688 251 aaKnown RBP25.88■■□□□ 1.73
ZNRF3-203ENST00000544604 HSP90AA1P07900 732 aaKnown RBP25.78■■□□□ 1.72
ZNRF3-203ENST00000544604 ARID3CA6NKF2 412 aa25.7■■□□□ 1.7
ZNRF3-203ENST00000544604 FBLN2P98095 1184 aa25.69■■□□□ 1.7
ZNRF3-203ENST00000544604 P3H3Q8IVL6 736 aa25.69■■□□□ 1.7
ZNRF3-203ENST00000544604 GLIPR1L2Q4G1C9 344 aa25.68■■□□□ 1.7
ZNRF3-203ENST00000544604 UPF2Q9HAU5 1272 aaKnown RBP25.66■■□□□ 1.7
ZNRF3-203ENST00000544604 NBR1Q14596 966 aa25.66■■□□□ 1.7
ZNRF3-203ENST00000544604 HNRNPUQ00839 825 aaKnown RBP eCLIP25.66■■□□□ 1.73e-6■■□□□ 13.8
ZNRF3-203ENST00000544604 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
ZNRF3-203ENST00000544604 FAM9BQ8IZU0 186 aa25.6■■□□□ 1.69
ZNRF3-203ENST00000544604 ZNF777Q9ULD5 760 aaPredicted RBP25.59■■□□□ 1.69
ZNRF3-203ENST00000544604 ARXQ96QS3 562 aa25.56■■□□□ 1.68
ZNRF3-203ENST00000544604 SALL2Q9Y467 1007 aaPredicted RBP25.54■■□□□ 1.68
ZNRF3-203ENST00000544604 DDX10Q13206 875 aaKnown RBP25.52■■□□□ 1.68
ZNRF3-203ENST00000544604 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
ZNRF3-203ENST00000544604 CCDC136Q96JN2 1154 aa25.49■■□□□ 1.67
ZNRF3-203ENST00000544604 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
ZNRF3-203ENST00000544604 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.36■■□□□ 1.65
ZNRF3-203ENST00000544604 CHGAP10645 457 aaKnown RBP25.35■■□□□ 1.65
ZNRF3-203ENST00000544604 TMC1Q8TDI8 760 aa25.33■■□□□ 1.65
ZNRF3-203ENST00000544604 IRX6P78412 446 aaPredicted RBP25.31■■□□□ 1.64
ZNRF3-203ENST00000544604 ABCC9O60706 1549 aa25.31■■□□□ 1.64
ZNRF3-203ENST00000544604 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
ZNRF3-203ENST00000544604 WDR43Q15061 677 aaKnown RBP eCLIP25.24■■□□□ 1.63
ZNRF3-203ENST00000544604 STAG3Q9UJ98 1225 aa25.23■■□□□ 1.63
ZNRF3-203ENST00000544604 MRS2Q9HD23 443 aa25.23■■□□□ 1.63
ZNRF3-203ENST00000544604 ESF1Q9H501 851 aaKnown RBP25.18■■□□□ 1.62
ZNRF3-203ENST00000544604 MIER1Q8N108 512 aa25.16■■□□□ 1.62
ZNRF3-203ENST00000544604 CHIC2Q9UKJ5 165 aa25.13■■□□□ 1.61
ZNRF3-203ENST00000544604 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
ZNRF3-203ENST00000544604 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
ZNRF3-203ENST00000544604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.07■■□□□ 1.61e-6■□□□□ 10.8
ZNRF3-203ENST00000544604 DDRGK1Q96HY6 314 aa25.07■■□□□ 1.6
ZNRF3-203ENST00000544604 TRIM44Q96DX7 344 aaPredicted RBP25.07■■□□□ 1.6
ZNRF3-203ENST00000544604 MYH16Q9H6N6 1097 aa25.07■■□□□ 1.6
ZNRF3-203ENST00000544604 HIRIP3Q9BW71 556 aaPredicted RBP25.06■■□□□ 1.6
ZNRF3-203ENST00000544604 KDM2AQ9Y2K7 1162 aa25.05■■□□□ 1.6
ZNRF3-203ENST00000544604 BECN1Q14457 450 aa25.03■■□□□ 1.6
ZNRF3-203ENST00000544604 CDK11BP21127 795 aaKnown RBP24.99■■□□□ 1.59
ZNRF3-203ENST00000544604 NCLP19338 710 aaKnown RBP24.98■■□□□ 1.59
ZNRF3-203ENST00000544604 ANP32EQ9BTT0 268 aa24.92■■□□□ 1.58
ZNRF3-203ENST00000544604 GOLGA6L22H0YM25 854 aa24.91■■□□□ 1.58
ZNRF3-203ENST00000544604 EIF4G2P78344 907 aaKnown RBP eCLIP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms