RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
PKP4-202ENST00000389759 NISCHQ9Y2I1 1504 aa14.27□□□□□ -0.12
PKP4-202ENST00000389759 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
PKP4-202ENST00000389759 SHROOM4Q9ULL8 1493 aa13.91□□□□□ -0.18
PKP4-202ENST00000389759 PCGF6Q9BYE7 350 aa13.74□□□□□ -0.21
PKP4-202ENST00000389759 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
PKP4-202ENST00000389759 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
PKP4-202ENST00000389759 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
PKP4-202ENST00000389759 CENPBP07199 599 aaPredicted RBP13.44□□□□□ -0.26
PKP4-202ENST00000389759 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
PKP4-202ENST00000389759 MYT1Q01538 1121 aa13.37□□□□□ -0.27
PKP4-202ENST00000389759 HRCP23327 699 aa13.34□□□□□ -0.27
PKP4-202ENST00000389759 APLP2Q06481 763 aa13.29□□□□□ -0.28
PKP4-202ENST00000389759 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
PKP4-202ENST00000389759 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
PKP4-202ENST00000389759 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
PKP4-202ENST00000389759 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
PKP4-202ENST00000389759 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
PKP4-202ENST00000389759 YTHDC1Q96MU7 727 aaKnown RBP13.06□□□□□ -0.32
PKP4-202ENST00000389759 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
PKP4-202ENST00000389759 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
PKP4-202ENST00000389759 LOC105371045A0A1W2PR82 267 aa12.93□□□□□ -0.34
PKP4-202ENST00000389759 NEFLP07196 543 aa12.92□□□□□ -0.34
PKP4-202ENST00000389759 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
PKP4-202ENST00000389759 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
PKP4-202ENST00000389759 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
PKP4-202ENST00000389759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
PKP4-202ENST00000389759 GTF3C3Q9Y5Q9 886 aa12.65□□□□□ -0.38
PKP4-202ENST00000389759 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
PKP4-202ENST00000389759 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
PKP4-202ENST00000389759 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
PKP4-202ENST00000389759 ITGAEP38570 1179 aa12.5□□□□□ -0.41
PKP4-202ENST00000389759 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
PKP4-202ENST00000389759 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
PKP4-202ENST00000389759 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
PKP4-202ENST00000389759 BCANQ96GW7 911 aa12.36□□□□□ -0.43
PKP4-202ENST00000389759 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
PKP4-202ENST00000389759 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
PKP4-202ENST00000389759 DCAF1Q9Y4B6 1507 aa12.3□□□□□ -0.44
PKP4-202ENST00000389759 NEUROD1Q13562 356 aa12.28□□□□□ -0.44
PKP4-202ENST00000389759 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
PKP4-202ENST00000389759 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
PKP4-202ENST00000389759 CLSPNQ9HAW4 1339 aa12.21□□□□□ -0.45
PKP4-202ENST00000389759 ANP32CO43423 234 aa12.21□□□□□ -0.46
PKP4-202ENST00000389759 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
PKP4-202ENST00000389759 ABCC9O60706 1549 aa12.13□□□□□ -0.47
PKP4-202ENST00000389759 FKBP8Q14318 412 aa12.08□□□□□ -0.48
PKP4-202ENST00000389759 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
PKP4-202ENST00000389759 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
PKP4-202ENST00000389759 MYO15BQ96JP2 1530 aa12.03□□□□□ -0.48
PKP4-202ENST00000389759 ANP32AP39687 249 aaKnown RBP12.02□□□□□ -0.49
PKP4-202ENST00000389759 MIER1Q8N108 512 aa12.02□□□□□ -0.49
PKP4-202ENST00000389759 MYT1LQ9UL68 1186 aa11.98□□□□□ -0.49
PKP4-202ENST00000389759 DDX10Q13206 875 aaKnown RBP11.94□□□□□ -0.5
PKP4-202ENST00000389759 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
PKP4-202ENST00000389759 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
PKP4-202ENST00000389759 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
PKP4-202ENST00000389759 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
PKP4-202ENST00000389759 ANP32EQ9BTT0 268 aa11.89□□□□□ -0.51
PKP4-202ENST00000389759 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
PKP4-202ENST00000389759 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
PKP4-202ENST00000389759 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
PKP4-202ENST00000389759 NBR1Q14596 966 aa11.83□□□□□ -0.52
PKP4-202ENST00000389759 TONSLQ96HA7 1378 aa11.83□□□□□ -0.52
PKP4-202ENST00000389759 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.527e-8■□□□□ 10
PKP4-202ENST00000389759 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
PKP4-202ENST00000389759 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
PKP4-202ENST00000389759 CCDC136Q96JN2 1154 aa11.79□□□□□ -0.52
PKP4-202ENST00000389759 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
PKP4-202ENST00000389759 CANXP27824 592 aaKnown RBP11.75□□□□□ -0.53
PKP4-202ENST00000389759 IRX6P78412 446 aaPredicted RBP11.75□□□□□ -0.53
PKP4-202ENST00000389759 SUPT16HQ9Y5B9 1047 aaKnown RBP11.73□□□□□ -0.53
PKP4-202ENST00000389759 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
PKP4-202ENST00000389759 GLIPR1L2Q4G1C9 344 aa11.7□□□□□ -0.54
PKP4-202ENST00000389759 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
PKP4-202ENST00000389759 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
PKP4-202ENST00000389759 CLIP1P30622 1438 aa11.68□□□□□ -0.54
PKP4-202ENST00000389759 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
PKP4-202ENST00000389759 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
PKP4-202ENST00000389759 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
PKP4-202ENST00000389759 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
PKP4-202ENST00000389759 ANP32BQ92688 251 aaKnown RBP11.63□□□□□ -0.55
PKP4-202ENST00000389759 SCRIBQ14160 1630 aa11.62□□□□□ -0.55
PKP4-202ENST00000389759 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
PKP4-202ENST00000389759 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
PKP4-202ENST00000389759 EEA1Q15075 1411 aa11.61□□□□□ -0.55
PKP4-202ENST00000389759 EIF4G2P78344 907 aaKnown RBP eCLIP11.6□□□□□ -0.55
PKP4-202ENST00000389759 TNIKQ9UKE5 1360 aa11.59□□□□□ -0.55
PKP4-202ENST00000389759 HSP90AA1P07900 732 aaKnown RBP11.58□□□□□ -0.56
PKP4-202ENST00000389759 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
PKP4-202ENST00000389759 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.57□□□□□ -0.56
PKP4-202ENST00000389759 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
PKP4-202ENST00000389759 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
PKP4-202ENST00000389759 CHIC2Q9UKJ5 165 aa11.56□□□□□ -0.56
PKP4-202ENST00000389759 RBM19Q9Y4C8 960 aaKnown RBP11.56□□□□□ -0.56
PKP4-202ENST00000389759 ARXQ96QS3 562 aa11.55□□□□□ -0.56
PKP4-202ENST00000389759 DDRGK1Q96HY6 314 aa11.55□□□□□ -0.56
PKP4-202ENST00000389759 NEFMP07197 916 aa11.54□□□□□ -0.56
PKP4-202ENST00000389759 NOP58Q9Y2X3 529 aaKnown RBP11.53□□□□□ -0.56
PKP4-202ENST00000389759 PPM1GO15355 546 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms