RNA–Protein interactions for RNA: ENST00000335681.9

NPAS2-201, Transcript of neuronal PAS domain protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS2, Length 4,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-201ENST00000335681 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
NPAS2-201ENST00000335681 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
NPAS2-201ENST00000335681 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
NPAS2-201ENST00000335681 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
NPAS2-201ENST00000335681 PCGF6Q9BYE7 350 aa25.83■■□□□ 1.73
NPAS2-201ENST00000335681 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
NPAS2-201ENST00000335681 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
NPAS2-201ENST00000335681 HRCP23327 699 aa25.27■■□□□ 1.64
NPAS2-201ENST00000335681 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
NPAS2-201ENST00000335681 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
NPAS2-201ENST00000335681 TTBK1Q5TCY1 1321 aaPredicted RBP24.72■■□□□ 1.55
NPAS2-201ENST00000335681 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
NPAS2-201ENST00000335681 PELP1Q8IZL8 1130 aaKnown RBP24.59■■□□□ 1.53
NPAS2-201ENST00000335681 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
NPAS2-201ENST00000335681 YTHDC1Q96MU7 727 aaKnown RBP24.3■■□□□ 1.48
NPAS2-201ENST00000335681 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
NPAS2-201ENST00000335681 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
NPAS2-201ENST00000335681 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
NPAS2-201ENST00000335681 RANGAP1P46060 587 aaPredicted RBP24.2■■□□□ 1.47
NPAS2-201ENST00000335681 ABCC9O60706 1549 aa24.08■■□□□ 1.45
NPAS2-201ENST00000335681 CENPBP07199 599 aaPredicted RBP24.08■■□□□ 1.44
NPAS2-201ENST00000335681 SCAF1Q9H7N4 1312 aaKnown RBP23.97■■□□□ 1.43
NPAS2-201ENST00000335681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
NPAS2-201ENST00000335681 GTF3C3Q9Y5Q9 886 aa23.88■■□□□ 1.41
NPAS2-201ENST00000335681 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
NPAS2-201ENST00000335681 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.411e-8■■■□□ 17.2
NPAS2-201ENST00000335681 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
NPAS2-201ENST00000335681 APLP2Q06481 763 aa23.65■■□□□ 1.38
NPAS2-201ENST00000335681 MYT1Q01538 1121 aa23.63■■□□□ 1.37
NPAS2-201ENST00000335681 DIEXFQ68CQ4 756 aaKnown RBP23.63■■□□□ 1.37
NPAS2-201ENST00000335681 NEUROD1Q13562 356 aa23.61■■□□□ 1.37
NPAS2-201ENST00000335681 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
NPAS2-201ENST00000335681 ATP1B4Q9UN42 357 aaPredicted RBP23.51■■□□□ 1.35
NPAS2-201ENST00000335681 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
NPAS2-201ENST00000335681 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.31
NPAS2-201ENST00000335681 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
NPAS2-201ENST00000335681 BCANQ96GW7 911 aa23.12■■□□□ 1.29
NPAS2-201ENST00000335681 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
NPAS2-201ENST00000335681 ITGAEP38570 1179 aa23.05■■□□□ 1.28
NPAS2-201ENST00000335681 ERICH6Q7L0X2 663 aa22.98■■□□□ 1.27
NPAS2-201ENST00000335681 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
NPAS2-201ENST00000335681 NEFLP07196 543 aa22.86■■□□□ 1.25
NPAS2-201ENST00000335681 MIER1Q8N108 512 aa22.81■■□□□ 1.24
NPAS2-201ENST00000335681 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
NPAS2-201ENST00000335681 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
NPAS2-201ENST00000335681 P3H3Q8IVL6 736 aa22.51■■□□□ 1.19
NPAS2-201ENST00000335681 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
NPAS2-201ENST00000335681 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
NPAS2-201ENST00000335681 ARID3CA6NKF2 412 aa22.42■■□□□ 1.18
NPAS2-201ENST00000335681 FKBP8Q14318 412 aa22.41■■□□□ 1.18
NPAS2-201ENST00000335681 CECR2Q9BXF3 1484 aa22.36■■□□□ 1.17
NPAS2-201ENST00000335681 FBLN2P98095 1184 aa22.36■■□□□ 1.17
NPAS2-201ENST00000335681 FAM50AQ14320 339 aaKnown RBP22.32■■□□□ 1.16
NPAS2-201ENST00000335681 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
NPAS2-201ENST00000335681 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
NPAS2-201ENST00000335681 ANP32EQ9BTT0 268 aa22.25■■□□□ 1.15
NPAS2-201ENST00000335681 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
NPAS2-201ENST00000335681 SUPT16HQ9Y5B9 1047 aaKnown RBP22.23■■□□□ 1.15
NPAS2-201ENST00000335681 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
NPAS2-201ENST00000335681 DDX10Q13206 875 aaKnown RBP22.21■■□□□ 1.15
NPAS2-201ENST00000335681 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
NPAS2-201ENST00000335681 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
NPAS2-201ENST00000335681 RB1CC1Q8TDY2 1594 aa22.17■■□□□ 1.14
NPAS2-201ENST00000335681 ANP32CO43423 234 aa22.06■■□□□ 1.12
NPAS2-201ENST00000335681 NACADO15069 1562 aa22.06■■□□□ 1.12
NPAS2-201ENST00000335681 TSHZ2Q9NRE2 1034 aa22.03■■□□□ 1.12
NPAS2-201ENST00000335681 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
NPAS2-201ENST00000335681 NBR1Q14596 966 aa22.01■■□□□ 1.11
NPAS2-201ENST00000335681 CEP162Q5TB80 1403 aa22■■□□□ 1.11
NPAS2-201ENST00000335681 MROH2BQ7Z745 1585 aa21.94■■□□□ 1.1
NPAS2-201ENST00000335681 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
NPAS2-201ENST00000335681 RTL5Q5HYW3 569 aaPredicted RBP21.9■■□□□ 1.1
NPAS2-201ENST00000335681 HNRNPUQ00839 825 aaKnown RBP eCLIP21.89■■□□□ 1.19e-7■■□□□ 12
NPAS2-201ENST00000335681 SENP3-EIF4A1A0A087X0R7 540 aa21.88■■□□□ 1.09
NPAS2-201ENST00000335681 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
NPAS2-201ENST00000335681 RBM19Q9Y4C8 960 aaKnown RBP21.79■■□□□ 1.08
NPAS2-201ENST00000335681 ZNF777Q9ULD5 760 aaPredicted RBP21.79■■□□□ 1.08
NPAS2-201ENST00000335681 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
NPAS2-201ENST00000335681 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
NPAS2-201ENST00000335681 NPM2Q86SE8 214 aaKnown RBP21.76■■□□□ 1.07
NPAS2-201ENST00000335681 SOGA1O94964 1423 aa21.75■■□□□ 1.07
NPAS2-201ENST00000335681 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
NPAS2-201ENST00000335681 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
NPAS2-201ENST00000335681 CLIP1P30622 1438 aa21.73■■□□□ 1.07
NPAS2-201ENST00000335681 RTN4Q9NQC3 1192 aaKnown RBP21.72■■□□□ 1.07
NPAS2-201ENST00000335681 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
NPAS2-201ENST00000335681 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.06
NPAS2-201ENST00000335681 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
NPAS2-201ENST00000335681 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
NPAS2-201ENST00000335681 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
NPAS2-201ENST00000335681 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
NPAS2-201ENST00000335681 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
NPAS2-201ENST00000335681 WIZO95785 1651 aa21.64■■□□□ 1.05
NPAS2-201ENST00000335681 CCDC88BA6NC98 1476 aa21.63■■□□□ 1.05
NPAS2-201ENST00000335681 SALL2Q9Y467 1007 aaPredicted RBP21.57■■□□□ 1.04
NPAS2-201ENST00000335681 TONSLQ96HA7 1378 aa21.51■■□□□ 1.03
NPAS2-201ENST00000335681 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
NPAS2-201ENST00000335681 SLC4A1APQ9BWU0 796 aaKnown RBP21.51■■□□□ 1.03
NPAS2-201ENST00000335681 ANP32AP39687 249 aaKnown RBP21.49■■□□□ 1.03
NPAS2-201ENST00000335681 B4GALNT3Q6L9W6 998 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms