RNA–Protein interactions for RNA: ENST00000545484.1

CCND1-206, Transcript of cyclin D1, humanhuman

TSL 5

Gene CCND1, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-206ENST00000545484 NISCHQ9Y2I1 1504 aa52.96■■■■■ 6.07
CCND1-206ENST00000545484 CCDC180Q9P1Z9 1646 aa47.32■■■■■ 5.17
CCND1-206ENST00000545484 ABCC9O60706 1549 aa46.68■■■■■ 5.06
CCND1-206ENST00000545484 RB1CC1Q8TDY2 1594 aa44.72■■■■■ 4.75
CCND1-206ENST00000545484 NACADO15069 1562 aa44.54■■■■■ 4.72
CCND1-206ENST00000545484 DCAF8L2P0C7V8 631 aa44.43■■■■■ 4.7
CCND1-206ENST00000545484 MYO15BQ96JP2 1530 aa44.09■■■■■ 4.65
CCND1-206ENST00000545484 ZCCHC6Q5VYS8 1495 aaKnown RBP44.04■■■■■ 4.64
CCND1-206ENST00000545484 UNC13AQ9UPW8 1703 aa43.78■■■■■ 4.6
CCND1-206ENST00000545484 DCAF1Q9Y4B6 1507 aa43.77■■■■■ 4.6
CCND1-206ENST00000545484 PABPN1Q86U42 306 aaKnown RBP eCLIP43.51■■■■■ 4.56
CCND1-206ENST00000545484 BICRAQ9NZM4 1560 aa43.37■■■■■ 4.53
CCND1-206ENST00000545484 SCRIBQ14160 1630 aa43.18■■■■■ 4.5
CCND1-206ENST00000545484 DNAJC5BQ9UF47 199 aa43.13■■■■■ 4.49
CCND1-206ENST00000545484 SHROOM4Q9ULL8 1493 aa42.84■■■■■ 4.45
CCND1-206ENST00000545484 EIF4G1Q04637 1599 aaKnown RBP42.27■■■■■ 4.36
CCND1-206ENST00000545484 CC2D2AQ9P2K1 1620 aa42.21■■■■■ 4.35
CCND1-206ENST00000545484 CECR2Q9BXF3 1484 aa41.96■■■■■ 4.31
CCND1-206ENST00000545484 SMARCA4P51532 1647 aa41.22■■■■■ 4.19
CCND1-206ENST00000545484 BAZ1AQ9NRL2 1556 aaPredicted RBP41.1■■■■■ 4.17
CCND1-206ENST00000545484 NCAPD3P42695 1498 aa41.06■■■■■ 4.16
CCND1-206ENST00000545484 ATAD2BQ9ULI0 1458 aa41.05■■■■■ 4.16
CCND1-206ENST00000545484 SMARCA2P51531 1590 aa41.01■■■■■ 4.16
CCND1-206ENST00000545484 HMGXB3Q12766 1538 aa40.88■■■■■ 4.13
CCND1-206ENST00000545484 MROH2BQ7Z745 1585 aa40.82■■■■■ 4.13
CCND1-206ENST00000545484 PEG3Q9GZU2 1588 aa40.78■■■■■ 4.12
CCND1-206ENST00000545484 BAZ1BQ9UIG0 1483 aaKnown RBP40.73■■■■■ 4.11
CCND1-206ENST00000545484 WIZO95785 1651 aa40.42■■■■■ 4.06
CCND1-206ENST00000545484 NESP48681 1621 aa40.27■■■■■ 4.04
CCND1-206ENST00000545484 ERCC6Q03468 1493 aa40.27■■■■■ 4.04
CCND1-206ENST00000545484 RSF1Q96T23 1441 aaPredicted RBP40.18■■■■■ 4.02
CCND1-206ENST00000545484 LAMC3Q9Y6N6 1575 aa40.1■■■■■ 4.01
CCND1-206ENST00000545484 CUX2O14529 1486 aa39.94■■■■□ 3.98
CCND1-206ENST00000545484 TOP2AP11388 1531 aaKnown RBP39.93■■■■□ 3.98
CCND1-206ENST00000545484 KIF21AQ7Z4S6 1674 aa39.85■■■■□ 3.97
CCND1-206ENST00000545484 CADPSQ9ULU8 1353 aa39.84■■■■□ 3.97
CCND1-206ENST00000545484 PDS5BQ9NTI5 1447 aa39.81■■■■□ 3.96
CCND1-206ENST00000545484 THOC2Q8NI27 1593 aaKnown RBP39.77■■■■□ 3.96
CCND1-206ENST00000545484 CFTRP13569 1480 aa39.54■■■■□ 3.92
CCND1-206ENST00000545484 MRC2Q9UBG0 1479 aa39.46■■■■□ 3.91
CCND1-206ENST00000545484 FANCD2Q9BXW9 1451 aa39.44■■■■□ 3.9
CCND1-206ENST00000545484 CEP164Q9UPV0 1460 aa39.44■■■■□ 3.9
CCND1-206ENST00000545484 CCDC88BA6NC98 1476 aa39.43■■■■□ 3.9
CCND1-206ENST00000545484 WDR62O43379 1518 aa39.35■■■■□ 3.89
CCND1-206ENST00000545484 PRDM2Q13029 1718 aa39.34■■■■□ 3.89
CCND1-206ENST00000545484 DNAJC5Q9H3Z4 198 aa39.15■■■■□ 3.86
CCND1-206ENST00000545484 URB2Q14146 1524 aaKnown RBP39.08■■■■□ 3.85
CCND1-206ENST00000545484 SUPT5HO00267 1087 aaKnown RBP38.89■■■■□ 3.82
CCND1-206ENST00000545484 TOPBP1Q92547 1522 aa38.77■■■■□ 3.8
CCND1-206ENST00000545484 ABCC8Q09428 1581 aa38.7■■■■□ 3.79
CCND1-206ENST00000545484 DNMBPQ6XZF7 1577 aa38.7■■■■□ 3.79
CCND1-206ENST00000545484 IFT140Q96RY7 1462 aa38.6■■■■□ 3.77
CCND1-206ENST00000545484 ZNF608Q9ULD9 1512 aaPredicted RBP38.48■■■■□ 3.75
CCND1-206ENST00000545484 POLA1P09884 1462 aaPredicted RBP38.41■■■■□ 3.74
CCND1-206ENST00000545484 TARBP1Q13395 1621 aaKnown RBP38.39■■■■□ 3.74
CCND1-206ENST00000545484 EIF4G3O43432 1585 aaKnown RBP38.37■■■■□ 3.73
CCND1-206ENST00000545484 CUX1P39880 1505 aa38.33■■■■□ 3.73
CCND1-206ENST00000545484 FGD5Q6ZNL6 1462 aa38.28■■■■□ 3.72
CCND1-206ENST00000545484 RAD54L2Q9Y4B4 1467 aa38.25■■■■□ 3.71
CCND1-206ENST00000545484 SOGA1O94964 1423 aa38.22■■■■□ 3.71
CCND1-206ENST00000545484 AQRO60306 1485 aaKnown RBP eCLIP38.2■■■■□ 3.719e-10■■■■□ 19.3
CCND1-206ENST00000545484 OSCARQ8IYS5 282 aa38.19■■■■□ 3.7
CCND1-206ENST00000545484 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
CCND1-206ENST00000545484 WDR97A6NE52 1622 aa38.05■■■■□ 3.68
CCND1-206ENST00000545484 CHD1O14646 1710 aa38■■■■□ 3.67
CCND1-206ENST00000545484 BIVM-ERCC5R4GMW8 1640 aa37.92■■■■□ 3.66
CCND1-206ENST00000545484 WRNQ14191 1432 aaPredicted RBP eCLIP37.92■■■■□ 3.66
CCND1-206ENST00000545484 TOP2BQ02880 1626 aa37.9■■■■□ 3.66
CCND1-206ENST00000545484 SYNJ1O43426 1573 aa37.89■■■■□ 3.66
CCND1-206ENST00000545484 SNAPC4Q5SXM2 1469 aa37.87■■■■□ 3.65
CCND1-206ENST00000545484 ABCA10Q8WWZ4 1543 aa37.85■■■■□ 3.65
CCND1-206ENST00000545484 FBLN2P98095 1184 aa37.84■■■■□ 3.65
CCND1-206ENST00000545484 GRIN2BQ13224 1484 aa37.84■■■■□ 3.65
CCND1-206ENST00000545484 PBRM1Q86U86 1689 aa37.83■■■■□ 3.65
CCND1-206ENST00000545484 ABCA5Q8WWZ7 1642 aa37.79■■■■□ 3.64
CCND1-206ENST00000545484 GAPVD1Q14C86 1478 aa37.78■■■■□ 3.64
CCND1-206ENST00000545484 MAGI1Q96QZ7 1491 aaPredicted RBP37.78■■■■□ 3.64
CCND1-206ENST00000545484 TRIM41Q8WV44 630 aa37.76■■■■□ 3.64
CCND1-206ENST00000545484 RIMBP3CA6NJZ7 1639 aa37.72■■■■□ 3.63
CCND1-206ENST00000545484 RIMBP3BA6NNM3 1639 aa37.72■■■■□ 3.63
CCND1-206ENST00000545484 RIMBP3Q9UFD9 1639 aa37.72■■■■□ 3.63
CCND1-206ENST00000545484 SYNJ2O15056 1496 aa37.64■■■■□ 3.62
CCND1-206ENST00000545484 CHMP7Q8WUX9 453 aaPredicted RBP37.64■■■■□ 3.62
CCND1-206ENST00000545484 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
CCND1-206ENST00000545484 CLASP1Q7Z460 1538 aa37.51■■■■□ 3.59
CCND1-206ENST00000545484 ADAMTS12P58397 1594 aa37.46■■■■□ 3.59
CCND1-206ENST00000545484 ERICH3Q5RHP9 1530 aa37.41■■■■□ 3.58
CCND1-206ENST00000545484 GRIN2AQ12879 1464 aa37.37■■■■□ 3.57
CCND1-206ENST00000545484 FHAD1B1AJZ9 1412 aa37.32■■■■□ 3.56
CCND1-206ENST00000545484 ARAP1Q96P48 1450 aa37.3■■■■□ 3.56
CCND1-206ENST00000545484 CYB5RLQ6IPT4 315 aa37.27■■■■□ 3.56
CCND1-206ENST00000545484 CEP170Q5SW79 1584 aa37.22■■■■□ 3.55
CCND1-206ENST00000545484 NUP160Q12769 1436 aa37.19■■■■□ 3.54
CCND1-206ENST00000545484 KIF27Q86VH2 1401 aa37.15■■■■□ 3.54
CCND1-206ENST00000545484 CUL7Q14999 1698 aa37.03■■■■□ 3.52
CCND1-206ENST00000545484 IGF1RP08069 1367 aa37.01■■■■□ 3.51
CCND1-206ENST00000545484 SHROOM2Q13796 1616 aa37■■■■□ 3.51
CCND1-206ENST00000545484 ERCC6L2Q5T890 1561 aa36.97■■■■□ 3.51
CCND1-206ENST00000545484 RUSC2Q8N2Y8 1516 aa36.93■■■■□ 3.5
CCND1-206ENST00000545484 CARMIL1Q5VZK9 1371 aa36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms