Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.89■■□□□ 1.58
LSMEM1Q8N8F7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.89■■□□□ 1.58
LSMEM1Q8N8F7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
LSMEM1Q8N8F7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
LSMEM1Q8N8F7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LSMEM1Q8N8F7 AC139426.1-201ENST00000568218 2529 ntBASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LSMEM1Q8N8F7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.86■■□□□ 1.57
LSMEM1Q8N8F7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.84■■□□□ 1.57
LSMEM1Q8N8F7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LSMEM1Q8N8F7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LSMEM1Q8N8F7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LSMEM1Q8N8F7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LSMEM1Q8N8F7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LSMEM1Q8N8F7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
LSMEM1Q8N8F7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.75■■□□□ 1.55
LSMEM1Q8N8F7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LSMEM1Q8N8F7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.74■■□□□ 1.55
LSMEM1Q8N8F7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LSMEM1Q8N8F7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
LSMEM1Q8N8F7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.72■■□□□ 1.55
LSMEM1Q8N8F7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.72■■□□□ 1.55
LSMEM1Q8N8F7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LSMEM1Q8N8F7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
LSMEM1Q8N8F7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
LSMEM1Q8N8F7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LSMEM1Q8N8F7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.7■■□□□ 1.54
LSMEM1Q8N8F7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSMEM1Q8N8F7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSMEM1Q8N8F7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
LSMEM1Q8N8F7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LSMEM1Q8N8F7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSMEM1Q8N8F7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
LSMEM1Q8N8F7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LSMEM1Q8N8F7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.63■■□□□ 1.53
LSMEM1Q8N8F7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LSMEM1Q8N8F7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LSMEM1Q8N8F7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LSMEM1Q8N8F7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LSMEM1Q8N8F7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.58■■□□□ 1.52
LSMEM1Q8N8F7 AL133380.1-201ENST00000506013 324 ntBASIC24.57■■□□□ 1.52
LSMEM1Q8N8F7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.57■■□□□ 1.52
LSMEM1Q8N8F7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LSMEM1Q8N8F7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LSMEM1Q8N8F7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 ABCB10P1-201ENST00000614297 2181 ntBASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 WASH5P-204ENST00000632292 975 ntBASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LSMEM1Q8N8F7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
LSMEM1Q8N8F7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LSMEM1Q8N8F7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LSMEM1Q8N8F7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LSMEM1Q8N8F7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
LSMEM1Q8N8F7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.47■■□□□ 1.51
LSMEM1Q8N8F7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LSMEM1Q8N8F7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LSMEM1Q8N8F7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.45■■□□□ 1.5
LSMEM1Q8N8F7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
LSMEM1Q8N8F7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LSMEM1Q8N8F7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSMEM1Q8N8F7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSMEM1Q8N8F7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 RARRES2P7-201ENST00000567349 469 ntBASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSMEM1Q8N8F7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSMEM1Q8N8F7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSMEM1Q8N8F7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
LSMEM1Q8N8F7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.39■■□□□ 1.5
LSMEM1Q8N8F7 ST7-AS1-201ENST00000456775 1889 ntBASIC24.39■■□□□ 1.5
LSMEM1Q8N8F7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
LSMEM1Q8N8F7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LSMEM1Q8N8F7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LSMEM1Q8N8F7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LSMEM1Q8N8F7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LSMEM1Q8N8F7 SETD8P1-201ENST00000623146 1180 ntBASIC24.37■■□□□ 1.49
LSMEM1Q8N8F7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LSMEM1Q8N8F7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSMEM1Q8N8F7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms