RNA–Protein interactions for RNA: ENST00000432365.6

SLC9A3R2-202, Transcript of SLC9A3 regulator 2, humanhuman

TSL 1 (best) BASIC

Gene SLC9A3R2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2-202ENST00000432365 NISCHQ9Y2I1 1504 aa63.36■■■■■ 7.73
SLC9A3R2-202ENST00000432365 CCDC180Q9P1Z9 1646 aa55.81■■■■■ 6.52
SLC9A3R2-202ENST00000432365 ABCC9O60706 1549 aa53.76■■■■■ 6.2
SLC9A3R2-202ENST00000432365 ZCCHC6Q5VYS8 1495 aaKnown RBP52.97■■■■■ 6.07
SLC9A3R2-202ENST00000432365 DCAF8L2P0C7V8 631 aa52.62■■■■■ 6.01
SLC9A3R2-202ENST00000432365 DCAF1Q9Y4B6 1507 aa52.44■■■■■ 5.99
SLC9A3R2-202ENST00000432365 MYO15BQ96JP2 1530 aa52.29■■■■■ 5.96
SLC9A3R2-202ENST00000432365 NACADO15069 1562 aa52.28■■■■■ 5.96
SLC9A3R2-202ENST00000432365 RB1CC1Q8TDY2 1594 aa52.09■■■■■ 5.93
SLC9A3R2-202ENST00000432365 SCRIBQ14160 1630 aa51.06■■■■■ 5.76
SLC9A3R2-202ENST00000432365 UNC13AQ9UPW8 1703 aa50.92■■■■■ 5.74
SLC9A3R2-202ENST00000432365 SHROOM4Q9ULL8 1493 aa50.71■■■■■ 5.71
SLC9A3R2-202ENST00000432365 BICRAQ9NZM4 1560 aa50.51■■■■■ 5.68
SLC9A3R2-202ENST00000432365 PABPN1Q86U42 306 aaKnown RBP eCLIP50.46■■■■■ 5.674e-9■■■■□ 19.4
SLC9A3R2-202ENST00000432365 CECR2Q9BXF3 1484 aa49.28■■■■■ 5.48
SLC9A3R2-202ENST00000432365 EIF4G1Q04637 1599 aaKnown RBP49.09■■■■■ 5.45
SLC9A3R2-202ENST00000432365 BAZ1AQ9NRL2 1556 aaPredicted RBP49.01■■■■■ 5.44
SLC9A3R2-202ENST00000432365 SMARCA4P51532 1647 aa48.92■■■■■ 5.42
SLC9A3R2-202ENST00000432365 MROH2BQ7Z745 1585 aa48.86■■■■■ 5.41
SLC9A3R2-202ENST00000432365 RSF1Q96T23 1441 aaPredicted RBP48.67■■■■■ 5.38
SLC9A3R2-202ENST00000432365 CC2D2AQ9P2K1 1620 aa48.65■■■■■ 5.38
SLC9A3R2-202ENST00000432365 DNAJC5BQ9UF47 199 aa48.52■■■■■ 5.36
SLC9A3R2-202ENST00000432365 ATAD2BQ9ULI0 1458 aa48.44■■■■■ 5.35
SLC9A3R2-202ENST00000432365 PEG3Q9GZU2 1588 aa48.44■■■■■ 5.34
SLC9A3R2-202ENST00000432365 SMARCA2P51531 1590 aa48.4■■■■■ 5.34
SLC9A3R2-202ENST00000432365 WIZO95785 1651 aa48.37■■■■■ 5.33
SLC9A3R2-202ENST00000432365 NCAPD3P42695 1498 aa48.27■■■■■ 5.32
SLC9A3R2-202ENST00000432365 SUPT5HO00267 1087 aaKnown RBP48.24■■■■■ 5.31
SLC9A3R2-202ENST00000432365 BAZ1BQ9UIG0 1483 aaKnown RBP48.08■■■■■ 5.29
SLC9A3R2-202ENST00000432365 HMGXB3Q12766 1538 aa48.07■■■■■ 5.29
SLC9A3R2-202ENST00000432365 TOP2AP11388 1531 aaKnown RBP47.89■■■■■ 5.26
SLC9A3R2-202ENST00000432365 CCDC88BA6NC98 1476 aa47.38■■■■■ 5.18
SLC9A3R2-202ENST00000432365 CADPSQ9ULU8 1353 aa46.93■■■■■ 5.1
SLC9A3R2-202ENST00000432365 CFTRP13569 1480 aa46.85■■■■■ 5.09
SLC9A3R2-202ENST00000432365 NESP48681 1621 aa46.82■■■■■ 5.09
SLC9A3R2-202ENST00000432365 LAMC3Q9Y6N6 1575 aa46.79■■■■■ 5.08
SLC9A3R2-202ENST00000432365 PRDM2Q13029 1718 aa46.48■■■■■ 5.03
SLC9A3R2-202ENST00000432365 PDS5BQ9NTI5 1447 aa46.48■■■■■ 5.03
SLC9A3R2-202ENST00000432365 FANCD2Q9BXW9 1451 aa46.37■■■■■ 5.01
SLC9A3R2-202ENST00000432365 KIF21AQ7Z4S6 1674 aa46.24■■■■■ 4.99
SLC9A3R2-202ENST00000432365 ERCC6Q03468 1493 aa46.23■■■■■ 4.99
SLC9A3R2-202ENST00000432365 CEP164Q9UPV0 1460 aa46.19■■■■■ 4.98
SLC9A3R2-202ENST00000432365 ABCC8Q09428 1581 aa45.94■■■■■ 4.94
SLC9A3R2-202ENST00000432365 MRC2Q9UBG0 1479 aa45.93■■■■■ 4.94
SLC9A3R2-202ENST00000432365 WRNQ14191 1432 aaPredicted RBP eCLIP45.85■■■■■ 4.93
SLC9A3R2-202ENST00000432365 URB2Q14146 1524 aaKnown RBP45.85■■■■■ 4.93
SLC9A3R2-202ENST00000432365 THOC2Q8NI27 1593 aaKnown RBP45.83■■■■■ 4.93
SLC9A3R2-202ENST00000432365 CUX1P39880 1505 aa45.77■■■■■ 4.92
SLC9A3R2-202ENST00000432365 DNMBPQ6XZF7 1577 aa45.74■■■■■ 4.91
SLC9A3R2-202ENST00000432365 TOPBP1Q92547 1522 aa45.74■■■■■ 4.91
SLC9A3R2-202ENST00000432365 WDR62O43379 1518 aa45.73■■■■■ 4.91
SLC9A3R2-202ENST00000432365 SYNJ1O43426 1573 aa45.67■■■■■ 4.9
SLC9A3R2-202ENST00000432365 TOP2BQ02880 1626 aa45.62■■■■■ 4.89
SLC9A3R2-202ENST00000432365 CHIC1Q5VXU3 224 aa45.61■■■■■ 4.89
SLC9A3R2-202ENST00000432365 BIVM-ERCC5R4GMW8 1640 aa45.58■■■■■ 4.89
SLC9A3R2-202ENST00000432365 TRIM41Q8WV44 630 aa45.5■■■■■ 4.87
SLC9A3R2-202ENST00000432365 FGD5Q6ZNL6 1462 aa45.45■■■■■ 4.87
SLC9A3R2-202ENST00000432365 POLA1P09884 1462 aaPredicted RBP45.43■■■■■ 4.86
SLC9A3R2-202ENST00000432365 CUX2O14529 1486 aa45.36■■■■■ 4.85
SLC9A3R2-202ENST00000432365 SOGA1O94964 1423 aa45.28■■■■■ 4.84
SLC9A3R2-202ENST00000432365 RAD54L2Q9Y4B4 1467 aa45.24■■■■■ 4.83
SLC9A3R2-202ENST00000432365 IFT140Q96RY7 1462 aa45.2■■■■■ 4.83
SLC9A3R2-202ENST00000432365 TARBP1Q13395 1621 aaKnown RBP45.15■■■■■ 4.82
SLC9A3R2-202ENST00000432365 ABCA10Q8WWZ4 1543 aa45.07■■■■■ 4.81
SLC9A3R2-202ENST00000432365 WDR97A6NE52 1622 aa44.98■■■■■ 4.79
SLC9A3R2-202ENST00000432365 ZNF608Q9ULD9 1512 aaPredicted RBP44.95■■■■■ 4.79
SLC9A3R2-202ENST00000432365 TDRD9Q8NDG6 1382 aaKnown RBP44.92■■■■■ 4.78
SLC9A3R2-202ENST00000432365 AQRO60306 1485 aaKnown RBP eCLIP44.83■■■■■ 4.775e-7■■■■■ 29.6
SLC9A3R2-202ENST00000432365 KIF27Q86VH2 1401 aa44.81■■■■■ 4.76
SLC9A3R2-202ENST00000432365 ABCA5Q8WWZ7 1642 aa44.77■■■■■ 4.76
SLC9A3R2-202ENST00000432365 RUSC2Q8N2Y8 1516 aa44.76■■■■■ 4.76
SLC9A3R2-202ENST00000432365 EIF4G3O43432 1585 aaKnown RBP44.75■■■■■ 4.75
SLC9A3R2-202ENST00000432365 GAPVD1Q14C86 1478 aa44.75■■■■■ 4.75
SLC9A3R2-202ENST00000432365 EEA1Q15075 1411 aa44.6■■■■■ 4.73
SLC9A3R2-202ENST00000432365 GRIN2BQ13224 1484 aa44.6■■■■■ 4.73
SLC9A3R2-202ENST00000432365 IGF1RP08069 1367 aa44.56■■■■■ 4.72
SLC9A3R2-202ENST00000432365 FAM9AQ8IZU1 332 aaPredicted RBP44.55■■■■■ 4.72
SLC9A3R2-202ENST00000432365 PBRM1Q86U86 1689 aa44.53■■■■■ 4.72
SLC9A3R2-202ENST00000432365 ERICH3Q5RHP9 1530 aa44.52■■■■■ 4.72
SLC9A3R2-202ENST00000432365 CSRNP3Q8WYN3 585 aa44.46■■■■■ 4.71
SLC9A3R2-202ENST00000432365 SNAPC4Q5SXM2 1469 aa44.4■■■■■ 4.7
SLC9A3R2-202ENST00000432365 MAGI1Q96QZ7 1491 aaPredicted RBP44.36■■■■■ 4.69
SLC9A3R2-202ENST00000432365 CARMIL1Q5VZK9 1371 aa44.29■■■■■ 4.68
SLC9A3R2-202ENST00000432365 CUL7Q14999 1698 aa44.28■■■■■ 4.68
SLC9A3R2-202ENST00000432365 FHAD1B1AJZ9 1412 aa44.27■■■■■ 4.68
SLC9A3R2-202ENST00000432365 ADAMTS12P58397 1594 aa44.26■■■■■ 4.68
SLC9A3R2-202ENST00000432365 PRXQ9BXM0 1461 aa44.22■■■■■ 4.67
SLC9A3R2-202ENST00000432365 SYNJ2O15056 1496 aa44.19■■■■■ 4.66
SLC9A3R2-202ENST00000432365 CHMP7Q8WUX9 453 aaPredicted RBP44.14■■■■■ 4.66
SLC9A3R2-202ENST00000432365 FBLN2P98095 1184 aa44.12■■■■■ 4.65
SLC9A3R2-202ENST00000432365 RAPGEF2Q9Y4G8 1499 aa44.11■■■■■ 4.65
SLC9A3R2-202ENST00000432365 KIF21BO75037 1637 aa44.04■■■■■ 4.64
SLC9A3R2-202ENST00000432365 GRIN2AQ12879 1464 aa44.02■■■■■ 4.64
SLC9A3R2-202ENST00000432365 CHD1O14646 1710 aa44■■■■■ 4.63
SLC9A3R2-202ENST00000432365 EHMT2Q96KQ7 1210 aa43.91■■■■■ 4.62
SLC9A3R2-202ENST00000432365 GOLGA3Q08378 1498 aa43.88■■■■■ 4.62
SLC9A3R2-202ENST00000432365 NUP160Q12769 1436 aa43.8■■■■■ 4.6
SLC9A3R2-202ENST00000432365 LOC105371045A0A1W2PR82 267 aa43.78■■■■■ 4.6
SLC9A3R2-202ENST00000432365 CEP170Q5SW79 1584 aa43.76■■■■■ 4.6
SLC9A3R2-202ENST00000432365 UBTFP17480 764 aaKnown RBP43.74■■■■■ 4.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms