RNA–Protein interactions for RNA: ENST00000372991.8

CCND3-203, Transcript of cyclin D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND3, Length 2,085 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-203ENST00000372991 NISCHQ9Y2I1 1504 aa49.22■■■■■ 5.47
CCND3-203ENST00000372991 HRCP23327 699 aa43.06■■■■■ 4.48
CCND3-203ENST00000372991 SHROOM4Q9ULL8 1493 aa42.52■■■■■ 4.4
CCND3-203ENST00000372991 SUPT5HO00267 1087 aaKnown RBP42.34■■■■■ 4.37
CCND3-203ENST00000372991 MYO15BQ96JP2 1530 aa42.14■■■■■ 4.34
CCND3-203ENST00000372991 CHIC1Q5VXU3 224 aa41.97■■■■■ 4.31
CCND3-203ENST00000372991 ZCCHC6Q5VYS8 1495 aaKnown RBP41.94■■■■■ 4.31
CCND3-203ENST00000372991 PCGF6Q9BYE7 350 aa41.91■■■■■ 4.3
CCND3-203ENST00000372991 DCAF1Q9Y4B6 1507 aa41.79■■■■■ 4.28
CCND3-203ENST00000372991 PELP1Q8IZL8 1130 aaKnown RBP41.71■■■■■ 4.27
CCND3-203ENST00000372991 PPARGC1BQ86YN6 1023 aaKnown RBP41.58■■■■■ 4.25
CCND3-203ENST00000372991 CCDC180Q9P1Z9 1646 aa41.43■■■■■ 4.22
CCND3-203ENST00000372991 TRIM26Q12899 539 aaPredicted RBP41.05■■■■■ 4.16
CCND3-203ENST00000372991 ZEB1P37275 1124 aaPredicted RBP40.95■■■■■ 4.15
CCND3-203ENST00000372991 LOC105371045A0A1W2PR82 267 aa40.58■■■■■ 4.09
CCND3-203ENST00000372991 SCAF1Q9H7N4 1312 aaKnown RBP40.38■■■■■ 4.06
CCND3-203ENST00000372991 MYT1Q01538 1121 aa40.23■■■■■ 4.03
CCND3-203ENST00000372991 DCAF8L2P0C7V8 631 aa39.97■■■■□ 3.99
CCND3-203ENST00000372991 ABCC9O60706 1549 aa39.89■■■■□ 3.98
CCND3-203ENST00000372991 ACIN1Q9UKV3 1341 aaKnown RBP39.67■■■■□ 3.94
CCND3-203ENST00000372991 TRIM41Q8WV44 630 aa39.5■■■■□ 3.91
CCND3-203ENST00000372991 RSF1Q96T23 1441 aaPredicted RBP39.38■■■■□ 3.89
CCND3-203ENST00000372991 CENPBP07199 599 aaPredicted RBP39.37■■■■□ 3.89
CCND3-203ENST00000372991 NEUROD1Q13562 356 aa39.33■■■■□ 3.89
CCND3-203ENST00000372991 RB1CC1Q8TDY2 1594 aa39.32■■■■□ 3.89
CCND3-203ENST00000372991 GTF3C3Q9Y5Q9 886 aa39.13■■■■□ 3.85
CCND3-203ENST00000372991 DIEXFQ68CQ4 756 aaKnown RBP39.03■■■■□ 3.84
CCND3-203ENST00000372991 CCER1Q8TC90 406 aaPredicted RBP39.01■■■■□ 3.84
CCND3-203ENST00000372991 FAM9AQ8IZU1 332 aaPredicted RBP38.99■■■■□ 3.83
CCND3-203ENST00000372991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.87■■■■□ 3.81
CCND3-203ENST00000372991 SCRIBQ14160 1630 aa38.76■■■■□ 3.8
CCND3-203ENST00000372991 WRNQ14191 1432 aaPredicted RBP eCLIP38.64■■■■□ 3.789e-6■■■■■ 50.1
CCND3-203ENST00000372991 ZNF316A6NFI3 1004 aaPredicted RBP38.45■■■■□ 3.75
CCND3-203ENST00000372991 EHMT2Q96KQ7 1210 aa38.44■■■■□ 3.74
CCND3-203ENST00000372991 EIF4G1Q04637 1599 aaKnown RBP38.35■■■■□ 3.73
CCND3-203ENST00000372991 MROH2BQ7Z745 1585 aa38.22■■■■□ 3.71
CCND3-203ENST00000372991 BAZ1AQ9NRL2 1556 aaPredicted RBP38.18■■■■□ 3.7
CCND3-203ENST00000372991 CEP162Q5TB80 1403 aa38.13■■■■□ 3.69
CCND3-203ENST00000372991 CECR2Q9BXF3 1484 aa38.12■■■■□ 3.69
CCND3-203ENST00000372991 WIZO95785 1651 aa38.1■■■■□ 3.69
CCND3-203ENST00000372991 CLSPNQ9HAW4 1339 aa38.09■■■■□ 3.69
CCND3-203ENST00000372991 TNIKQ9UKE5 1360 aa38.05■■■■□ 3.68
CCND3-203ENST00000372991 YTHDC1Q96MU7 727 aaKnown RBP37.96■■■■□ 3.67
CCND3-203ENST00000372991 EEA1Q15075 1411 aa37.94■■■■□ 3.66
CCND3-203ENST00000372991 NACADO15069 1562 aa37.93■■■■□ 3.66
CCND3-203ENST00000372991 MIER1Q8N108 512 aa37.91■■■■□ 3.66
CCND3-203ENST00000372991 TTBK1Q5TCY1 1321 aaPredicted RBP37.76■■■■□ 3.64
CCND3-203ENST00000372991 CCDC88BA6NC98 1476 aa37.75■■■■□ 3.63
CCND3-203ENST00000372991 TOP2AP11388 1531 aaKnown RBP37.67■■■■□ 3.62
CCND3-203ENST00000372991 ABCC8Q09428 1581 aa37.65■■■■□ 3.62
CCND3-203ENST00000372991 GOLGA3Q08378 1498 aa37.62■■■■□ 3.61
CCND3-203ENST00000372991 SOGA1O94964 1423 aa37.54■■■■□ 3.6
CCND3-203ENST00000372991 CSRNP3Q8WYN3 585 aa37.52■■■■□ 3.6
CCND3-203ENST00000372991 SMARCA2P51531 1590 aa37.45■■■■□ 3.58
CCND3-203ENST00000372991 SUPT16HQ9Y5B9 1047 aaKnown RBP37.43■■■■□ 3.58
CCND3-203ENST00000372991 UBTFP17480 764 aaKnown RBP37.39■■■■□ 3.58
CCND3-203ENST00000372991 ANP32EQ9BTT0 268 aa37.33■■■■□ 3.57
CCND3-203ENST00000372991 KIF21BO75037 1637 aa37.32■■■■□ 3.56
CCND3-203ENST00000372991 CEP164Q9UPV0 1460 aa37.28■■■■□ 3.56
CCND3-203ENST00000372991 HNRNPUL2Q1KMD3 747 aaKnown RBP37.27■■■■□ 3.56
CCND3-203ENST00000372991 SMARCA4P51532 1647 aa37.24■■■■□ 3.55
CCND3-203ENST00000372991 VPS8Q8N3P4 1428 aa37.23■■■■□ 3.55
CCND3-203ENST00000372991 RUSC2Q8N2Y8 1516 aa37.23■■■■□ 3.55
CCND3-203ENST00000372991 TSHZ2Q9NRE2 1034 aa37.19■■■■□ 3.54
CCND3-203ENST00000372991 CLIP1P30622 1438 aa37.14■■■■□ 3.54
CCND3-203ENST00000372991 BAZ1BQ9UIG0 1483 aaKnown RBP37.14■■■■□ 3.54
CCND3-203ENST00000372991 APLP2Q06481 763 aa37.01■■■■□ 3.52
CCND3-203ENST00000372991 DHX57Q6P158 1386 aaKnown RBP36.98■■■■□ 3.51
CCND3-203ENST00000372991 BCL11AQ9H165 835 aa36.94■■■■□ 3.5
CCND3-203ENST00000372991 SYNJ1O43426 1573 aa36.73■■■■□ 3.47
CCND3-203ENST00000372991 CUX2O14529 1486 aa36.73■■■■□ 3.47
CCND3-203ENST00000372991 RAPGEF2Q9Y4G8 1499 aa36.63■■■■□ 3.45
CCND3-203ENST00000372991 RRBP1Q9P2E9 1410 aaKnown RBP36.6■■■■□ 3.45
CCND3-203ENST00000372991 PEG3Q9GZU2 1588 aa36.57■■■■□ 3.44
CCND3-203ENST00000372991 ERICH3Q5RHP9 1530 aa36.51■■■■□ 3.43
CCND3-203ENST00000372991 UNC13AQ9UPW8 1703 aa36.42■■■■□ 3.42
CCND3-203ENST00000372991 ARAP1Q96P48 1450 aa36.4■■■■□ 3.42
CCND3-203ENST00000372991 FKBP8Q14318 412 aa36.38■■■■□ 3.41
CCND3-203ENST00000372991 NEFLP07196 543 aa36.36■■■■□ 3.41
CCND3-203ENST00000372991 RBM19Q9Y4C8 960 aaKnown RBP36.35■■■■□ 3.41
CCND3-203ENST00000372991 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
CCND3-203ENST00000372991 CCNB3Q8WWL7 1395 aa36.27■■■■□ 3.4
CCND3-203ENST00000372991 BCANQ96GW7 911 aa36.25■■■■□ 3.39
CCND3-203ENST00000372991 PRXQ9BXM0 1461 aa36.25■■■■□ 3.39
CCND3-203ENST00000372991 KCNH8Q96L42 1107 aa36.22■■■■□ 3.39
CCND3-203ENST00000372991 MAPKBP1O60336 1514 aa36.21■■■■□ 3.39
CCND3-203ENST00000372991 BIVM-ERCC5R4GMW8 1640 aa36.19■■■■□ 3.38
CCND3-203ENST00000372991 CCER2I3L3R5 266 aa36.17■■■■□ 3.38
CCND3-203ENST00000372991 KANK4Q5T7N3 995 aaPredicted RBP36.17■■■■□ 3.38
CCND3-203ENST00000372991 TIMELESSQ9UNS1 1208 aa36.07■■■■□ 3.37
CCND3-203ENST00000372991 RAB3GAP2Q9H2M9 1393 aa36.07■■■■□ 3.36
CCND3-203ENST00000372991 FANCIQ9NVI1 1328 aa36.06■■■■□ 3.36
CCND3-203ENST00000372991 PPP1R15AO75807 674 aaPredicted RBP36.02■■■■□ 3.36
CCND3-203ENST00000372991 RANGAP1P46060 587 aaPredicted RBP36.02■■■■□ 3.36
CCND3-203ENST00000372991 MAP3K1Q13233 1512 aa36■■■■□ 3.35
CCND3-203ENST00000372991 MYT1LQ9UL68 1186 aa36■■■■□ 3.35
CCND3-203ENST00000372991 WDR97A6NE52 1622 aa35.99■■■■□ 3.35
CCND3-203ENST00000372991 DDX10Q13206 875 aaKnown RBP35.96■■■■□ 3.35
CCND3-203ENST00000372991 SETD5Q9C0A6 1442 aa35.95■■■■□ 3.35
CCND3-203ENST00000372991 ATAD2BQ9ULI0 1458 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms