Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAV8-4A0A0B4J246 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-4A0A0B4J246 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-4A0A0B4J246 AP002365.1-201ENST00000603448 772 ntBASIC18.7■□□□□ 0.58
TRAV8-4A0A0B4J246 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV8-4A0A0B4J246 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV8-4A0A0B4J246 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV8-4A0A0B4J246 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRAV8-4A0A0B4J246 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-4A0A0B4J246 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV8-4A0A0B4J246 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-4A0A0B4J246 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-4A0A0B4J246 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-4A0A0B4J246 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAV8-4A0A0B4J246 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV8-4A0A0B4J246 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-4A0A0B4J246 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-4A0A0B4J246 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-4A0A0B4J246 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-4A0A0B4J246 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV8-4A0A0B4J246 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV8-4A0A0B4J246 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-4A0A0B4J246 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-4A0A0B4J246 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-4A0A0B4J246 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-4A0A0B4J246 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-4A0A0B4J246 AL031258.1-201ENST00000623562 325 ntBASIC18.61■□□□□ 0.57
TRAV8-4A0A0B4J246 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-4A0A0B4J246 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-4A0A0B4J246 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV8-4A0A0B4J246 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
TRAV8-4A0A0B4J246 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV8-4A0A0B4J246 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-4A0A0B4J246 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-4A0A0B4J246 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-4A0A0B4J246 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV8-4A0A0B4J246 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV8-4A0A0B4J246 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV8-4A0A0B4J246 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRAV8-4A0A0B4J246 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV8-4A0A0B4J246 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-4A0A0B4J246 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-4A0A0B4J246 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-4A0A0B4J246 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-4A0A0B4J246 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV8-4A0A0B4J246 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-4A0A0B4J246 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-4A0A0B4J246 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV8-4A0A0B4J246 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV8-4A0A0B4J246 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-4A0A0B4J246 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TRAV8-4A0A0B4J246 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV8-4A0A0B4J246 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV8-4A0A0B4J246 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV8-4A0A0B4J246 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV8-4A0A0B4J246 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV8-4A0A0B4J246 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV8-4A0A0B4J246 AC120057.4-201ENST00000624722 1615 ntBASIC18.5■□□□□ 0.55
TRAV8-4A0A0B4J246 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRAV8-4A0A0B4J246 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-4A0A0B4J246 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAV8-4A0A0B4J246 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-4A0A0B4J246 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-4A0A0B4J246 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-4A0A0B4J246 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV8-4A0A0B4J246 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-4A0A0B4J246 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV8-4A0A0B4J246 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV8-4A0A0B4J246 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-4A0A0B4J246 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-4A0A0B4J246 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRAV8-4A0A0B4J246 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV8-4A0A0B4J246 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-4A0A0B4J246 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-4A0A0B4J246 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-4A0A0B4J246 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-4A0A0B4J246 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-4A0A0B4J246 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-4A0A0B4J246 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-4A0A0B4J246 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-4A0A0B4J246 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-4A0A0B4J246 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-4A0A0B4J246 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-4A0A0B4J246 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-4A0A0B4J246 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV8-4A0A0B4J246 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-4A0A0B4J246 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-4A0A0B4J246 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRAV8-4A0A0B4J246 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-4A0A0B4J246 AC135731.1-201ENST00000569415 2548 ntBASIC18.39■□□□□ 0.53
TRAV8-4A0A0B4J246 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-4A0A0B4J246 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV8-4A0A0B4J246 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAV8-4A0A0B4J246 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV8-4A0A0B4J246 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV8-4A0A0B4J246 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV8-4A0A0B4J246 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV8-4A0A0B4J246 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV8-4A0A0B4J246 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-4A0A0B4J246 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms