Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRAV8-4A0A0B4J246 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
TRAV8-4A0A0B4J246 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV8-4A0A0B4J246 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
TRAV8-4A0A0B4J246 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV8-4A0A0B4J246 AL356512.1-201ENST00000607453 1739 ntBASIC22.3■■□□□ 1.16
TRAV8-4A0A0B4J246 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TRAV8-4A0A0B4J246 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TRAV8-4A0A0B4J246 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.2■■□□□ 1.15
TRAV8-4A0A0B4J246 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.03■■□□□ 1.12
TRAV8-4A0A0B4J246 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRAV8-4A0A0B4J246 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV8-4A0A0B4J246 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.9■■□□□ 1.1
TRAV8-4A0A0B4J246 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV8-4A0A0B4J246 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV8-4A0A0B4J246 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV8-4A0A0B4J246 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV8-4A0A0B4J246 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC21.58■■□□□ 1.05
TRAV8-4A0A0B4J246 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAV8-4A0A0B4J246 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV8-4A0A0B4J246 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-4A0A0B4J246 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
TRAV8-4A0A0B4J246 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV8-4A0A0B4J246 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRAV8-4A0A0B4J246 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV8-4A0A0B4J246 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV8-4A0A0B4J246 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV8-4A0A0B4J246 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.07■□□□□ 0.96
TRAV8-4A0A0B4J246 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
TRAV8-4A0A0B4J246 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
TRAV8-4A0A0B4J246 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV8-4A0A0B4J246 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV8-4A0A0B4J246 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV8-4A0A0B4J246 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV8-4A0A0B4J246 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAV8-4A0A0B4J246 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAV8-4A0A0B4J246 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV8-4A0A0B4J246 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV8-4A0A0B4J246 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV8-4A0A0B4J246 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAV8-4A0A0B4J246 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRAV8-4A0A0B4J246 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAV8-4A0A0B4J246 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRAV8-4A0A0B4J246 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV8-4A0A0B4J246 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV8-4A0A0B4J246 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV8-4A0A0B4J246 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV8-4A0A0B4J246 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV8-4A0A0B4J246 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC20.6■□□□□ 0.89
TRAV8-4A0A0B4J246 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
TRAV8-4A0A0B4J246 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV8-4A0A0B4J246 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV8-4A0A0B4J246 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAV8-4A0A0B4J246 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV8-4A0A0B4J246 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
TRAV8-4A0A0B4J246 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAV8-4A0A0B4J246 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV8-4A0A0B4J246 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-4A0A0B4J246 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV8-4A0A0B4J246 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV8-4A0A0B4J246 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV8-4A0A0B4J246 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV8-4A0A0B4J246 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-4A0A0B4J246 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV8-4A0A0B4J246 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAV8-4A0A0B4J246 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRAV8-4A0A0B4J246 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV8-4A0A0B4J246 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-4A0A0B4J246 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-4A0A0B4J246 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV8-4A0A0B4J246 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRAV8-4A0A0B4J246 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV8-4A0A0B4J246 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TRAV8-4A0A0B4J246 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-4A0A0B4J246 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV8-4A0A0B4J246 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV8-4A0A0B4J246 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV8-4A0A0B4J246 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV8-4A0A0B4J246 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV8-4A0A0B4J246 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
TRAV8-4A0A0B4J246 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-4A0A0B4J246 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-4A0A0B4J246 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-4A0A0B4J246 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-4A0A0B4J246 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-4A0A0B4J246 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-4A0A0B4J246 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRAV8-4A0A0B4J246 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-4A0A0B4J246 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV8-4A0A0B4J246 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV8-4A0A0B4J246 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRAV8-4A0A0B4J246 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAV8-4A0A0B4J246 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-4A0A0B4J246 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV8-4A0A0B4J246 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRAV8-4A0A0B4J246 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV8-4A0A0B4J246 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-4A0A0B4J246 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
TRAV8-4A0A0B4J246 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV8-4A0A0B4J246 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms