RNA–Protein interactions for RNA: ENST00000560471.5

SHF-206, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-206ENST00000560471 NISCHQ9Y2I1 1504 aa54.15■■■■■ 6.26
SHF-206ENST00000560471 SHROOM4Q9ULL8 1493 aa46.17■■■■■ 4.98
SHF-206ENST00000560471 CCDC180Q9P1Z9 1646 aa46.03■■■■■ 4.96
SHF-206ENST00000560471 ZCCHC6Q5VYS8 1495 aaKnown RBP45.82■■■■■ 4.93
SHF-206ENST00000560471 SUPT5HO00267 1087 aaKnown RBP45.27■■■■■ 4.84
SHF-206ENST00000560471 DCAF8L2P0C7V8 631 aa44.84■■■■■ 4.77
SHF-206ENST00000560471 DCAF1Q9Y4B6 1507 aa44.41■■■■■ 4.7
SHF-206ENST00000560471 CHIC1Q5VXU3 224 aa44.04■■■■■ 4.64
SHF-206ENST00000560471 MYO15BQ96JP2 1530 aa43.93■■■■■ 4.62
SHF-206ENST00000560471 ABCC9O60706 1549 aa43.25■■■■■ 4.51
SHF-206ENST00000560471 SCRIBQ14160 1630 aa43.17■■■■■ 4.5
SHF-206ENST00000560471 RSF1Q96T23 1441 aaPredicted RBP42.86■■■■■ 4.45
SHF-206ENST00000560471 LOC105371045A0A1W2PR82 267 aa42.74■■■■■ 4.43
SHF-206ENST00000560471 HRCP23327 699 aa42.7■■■■■ 4.43
SHF-206ENST00000560471 PCGF6Q9BYE7 350 aa42.67■■■■■ 4.42
SHF-206ENST00000560471 NACADO15069 1562 aa42.54■■■■■ 4.4
SHF-206ENST00000560471 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.38
SHF-206ENST00000560471 CECR2Q9BXF3 1484 aa42.26■■■■■ 4.36
SHF-206ENST00000560471 TRIM41Q8WV44 630 aa42.15■■■■■ 4.34
SHF-206ENST00000560471 MROH2BQ7Z745 1585 aa42.12■■■■■ 4.33
SHF-206ENST00000560471 WIZO95785 1651 aa41.9■■■■■ 4.3
SHF-206ENST00000560471 TRIM26Q12899 539 aaPredicted RBP41.85■■■■■ 4.29
SHF-206ENST00000560471 PPARGC1BQ86YN6 1023 aaKnown RBP41.84■■■■■ 4.29
SHF-206ENST00000560471 FAM9AQ8IZU1 332 aaPredicted RBP41.83■■■■■ 4.29
SHF-206ENST00000560471 BAZ1AQ9NRL2 1556 aaPredicted RBP41.63■■■■■ 4.26
SHF-206ENST00000560471 EHMT2Q96KQ7 1210 aa41.48■■■■■ 4.23
SHF-206ENST00000560471 EIF4G1Q04637 1599 aaKnown RBP41.37■■■■■ 4.21
SHF-206ENST00000560471 UNC13AQ9UPW8 1703 aa41.28■■■■■ 4.2
SHF-206ENST00000560471 SMARCA4P51532 1647 aa41.24■■■■■ 4.19
SHF-206ENST00000560471 TOP2AP11388 1531 aaKnown RBP41.23■■■■■ 4.19
SHF-206ENST00000560471 CCDC88BA6NC98 1476 aa41.06■■■■■ 4.16
SHF-206ENST00000560471 SMARCA2P51531 1590 aa41.02■■■■■ 4.16
SHF-206ENST00000560471 ABCC8Q09428 1581 aa40.97■■■■■ 4.15
SHF-206ENST00000560471 ZEB1P37275 1124 aaPredicted RBP40.9■■■■■ 4.14
SHF-206ENST00000560471 PABPN1Q86U42 306 aaKnown RBP eCLIP40.77■■■■■ 4.12
SHF-206ENST00000560471 BICRAQ9NZM4 1560 aa40.75■■■■■ 4.11
SHF-206ENST00000560471 SOGA1O94964 1423 aa40.58■■■■■ 4.09
SHF-206ENST00000560471 PEG3Q9GZU2 1588 aa40.44■■■■■ 4.06
SHF-206ENST00000560471 RUSC2Q8N2Y8 1516 aa40.4■■■■■ 4.06
SHF-206ENST00000560471 CEP162Q5TB80 1403 aa40.39■■■■■ 4.06
SHF-206ENST00000560471 WRNQ14191 1432 aaPredicted RBP eCLIP40.34■■■■■ 4.05
SHF-206ENST00000560471 EEA1Q15075 1411 aa40.33■■■■■ 4.05
SHF-206ENST00000560471 CSRNP3Q8WYN3 585 aa40.32■■■■■ 4.04
SHF-206ENST00000560471 TNIKQ9UKE5 1360 aa40.31■■■■■ 4.04
SHF-206ENST00000560471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.2■■■■■ 4.03
SHF-206ENST00000560471 ATAD2BQ9ULI0 1458 aa40.17■■■■■ 4.02
SHF-206ENST00000560471 TTBK1Q5TCY1 1321 aaPredicted RBP40.15■■■■■ 4.02
SHF-206ENST00000560471 UBTFP17480 764 aaKnown RBP40.15■■■■■ 4.02
SHF-206ENST00000560471 SYNJ1O43426 1573 aa40.09■■■■■ 4.01
SHF-206ENST00000560471 GOLGA3Q08378 1498 aa40.09■■■■■ 4.01
SHF-206ENST00000560471 CCER1Q8TC90 406 aaPredicted RBP40.07■■■■■ 4.01
SHF-206ENST00000560471 BAZ1BQ9UIG0 1483 aaKnown RBP40.06■■■■■ 4
SHF-206ENST00000560471 CEP164Q9UPV0 1460 aa39.85■■■■□ 3.97
SHF-206ENST00000560471 KIF21BO75037 1637 aa39.83■■■■□ 3.97
SHF-206ENST00000560471 CLIP1P30622 1438 aa39.63■■■■□ 3.93
SHF-206ENST00000560471 RAPGEF2Q9Y4G8 1499 aa39.59■■■■□ 3.93
SHF-206ENST00000560471 TOP2BQ02880 1626 aa39.57■■■■□ 3.93
SHF-206ENST00000560471 VPS8Q8N3P4 1428 aa39.46■■■■□ 3.91
SHF-206ENST00000560471 BIVM-ERCC5R4GMW8 1640 aa39.44■■■■□ 3.9
SHF-206ENST00000560471 HMGXB3Q12766 1538 aa39.37■■■■□ 3.89
SHF-206ENST00000560471 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
SHF-206ENST00000560471 RANGAP1P46060 587 aaPredicted RBP39.37■■■■□ 3.89
SHF-206ENST00000560471 SCAF1Q9H7N4 1312 aaKnown RBP39.34■■■■□ 3.89
SHF-206ENST00000560471 HNRNPUL2Q1KMD3 747 aaKnown RBP39.29■■■■□ 3.88
SHF-206ENST00000560471 DIEXFQ68CQ4 756 aaKnown RBP39.29■■■■□ 3.88
SHF-206ENST00000560471 APLP2Q06481 763 aa39.22■■■■□ 3.87
SHF-206ENST00000560471 CUX1P39880 1505 aa39.21■■■■□ 3.87
SHF-206ENST00000560471 PRXQ9BXM0 1461 aa39.19■■■■□ 3.86
SHF-206ENST00000560471 ERICH3Q5RHP9 1530 aa39.17■■■■□ 3.86
SHF-206ENST00000560471 CFTRP13569 1480 aa39.07■■■■□ 3.85
SHF-206ENST00000560471 ARAP1Q96P48 1450 aa39.02■■■■□ 3.84
SHF-206ENST00000560471 ZNF316A6NFI3 1004 aaPredicted RBP39.01■■■■□ 3.83
SHF-206ENST00000560471 KIF27Q86VH2 1401 aa38.99■■■■□ 3.83
SHF-206ENST00000560471 ACIN1Q9UKV3 1341 aaKnown RBP38.96■■■■□ 3.83
SHF-206ENST00000560471 NEUROD1Q13562 356 aa38.94■■■■□ 3.82
SHF-206ENST00000560471 KANK4Q5T7N3 995 aaPredicted RBP38.8■■■■□ 3.8
SHF-206ENST00000560471 PRDM2Q13029 1718 aa38.77■■■■□ 3.8
SHF-206ENST00000560471 CENPBP07199 599 aaPredicted RBP38.71■■■■□ 3.79
SHF-206ENST00000560471 ARHGAP35Q9NRY4 1499 aa38.67■■■■□ 3.78
SHF-206ENST00000560471 CUX2O14529 1486 aa38.64■■■■□ 3.78
SHF-206ENST00000560471 CADPSQ9ULU8 1353 aa38.62■■■■□ 3.77
SHF-206ENST00000560471 IGF1RP08069 1367 aa38.58■■■■□ 3.77
SHF-206ENST00000560471 DHX57Q6P158 1386 aaKnown RBP38.55■■■■□ 3.76
SHF-206ENST00000560471 RRBP1Q9P2E9 1410 aaKnown RBP38.55■■■■□ 3.76
SHF-206ENST00000560471 GTF3C3Q9Y5Q9 886 aa38.51■■■■□ 3.76
SHF-206ENST00000560471 FGD5Q6ZNL6 1462 aa38.5■■■■□ 3.75
SHF-206ENST00000560471 MIER1Q8N108 512 aa38.47■■■■□ 3.75
SHF-206ENST00000560471 CLSPNQ9HAW4 1339 aa38.45■■■■□ 3.75
SHF-206ENST00000560471 CARMIL1Q5VZK9 1371 aa38.41■■■■□ 3.74
SHF-206ENST00000560471 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.73
SHF-206ENST00000560471 CCNB3Q8WWL7 1395 aa38.38■■■■□ 3.73
SHF-206ENST00000560471 PELP1Q8IZL8 1130 aaKnown RBP38.38■■■■□ 3.73
SHF-206ENST00000560471 YTHDC1Q96MU7 727 aaKnown RBP38.37■■■■□ 3.73
SHF-206ENST00000560471 FANCD2Q9BXW9 1451 aa38.27■■■■□ 3.72
SHF-206ENST00000560471 TIAM1Q13009 1591 aa38.26■■■■□ 3.72
SHF-206ENST00000560471 ITGAEP38570 1179 aa38.24■■■■□ 3.71
SHF-206ENST00000560471 MAP3K1Q13233 1512 aa38.19■■■■□ 3.7
SHF-206ENST00000560471 RAD54L2Q9Y4B4 1467 aa38.12■■■■□ 3.69
SHF-206ENST00000560471 LRRC9Q6ZRR7 1453 aa38.1■■■■□ 3.69
SHF-206ENST00000560471 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms