Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 VEGFA-221ENST00000520265 336 ntTSL 515.8■□□□□ 0.126e-13■□□□□ 9.7
PHF6Q8IWS0 SPRED2-205ENST00000440972 555 ntTSL 315.5■□□□□ 0.078e-6■□□□□ 9.7
PHF6Q8IWS0 MGAT4B-210ENST00000519965 524 ntTSL 315.36■□□□□ 0.058e-6■□□□□ 9.7
PHF6Q8IWS0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.018e-6■□□□□ 9.7
PHF6Q8IWS0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.38e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC12.99□□□□□ -0.338e-6■□□□□ 9.7
PHF6Q8IWS0 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)12.67□□□□□ -0.386e-13■□□□□ 9.7
PHF6Q8IWS0 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.18□□□□□ -0.468e-6■□□□□ 9.7
PHF6Q8IWS0 CTBP2-213ENST00000530930 425 ntTSL 512.07□□□□□ -0.488e-6■□□□□ 9.7
PHF6Q8IWS0 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC11.98□□□□□ -0.498e-6■□□□□ 9.7
PHF6Q8IWS0 AGO2-209ENST00000523609 3050 ntTSL 1 (best)11.14□□□□□ -0.638e-6■□□□□ 9.7
PHF6Q8IWS0 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.638e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-203ENST00000557929 635 ntTSL 511.08□□□□□ -0.648e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-207ENST00000558635 736 ntTSL 1 (best)10.94□□□□□ -0.668e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-216ENST00000559948 710 ntTSL 510.43□□□□□ -0.748e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-210ENST00000559146 674 ntTSL 29.59□□□□□ -0.878e-6■□□□□ 9.7
PHF6Q8IWS0 AGO2-202ENST00000517293 422 ntTSL 39.31□□□□□ -0.928e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.928e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-208ENST00000558639 733 ntTSL 38.91□□□□□ -0.988e-6■□□□□ 9.7
PHF6Q8IWS0 VEGFA-214ENST00000493786 551 ntTSL 27.93□□□□□ -1.146e-13■□□□□ 9.7
PHF6Q8IWS0 PSMA4-217ENST00000560033 570 ntTSL 47.84□□□□□ -1.158e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.15□□□□□ -1.428e-6■□□□□ 9.7
PHF6Q8IWS0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.578e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.588e-6■□□□□ 9.7
PHF6Q8IWS0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.92□□□□□ -1.628e-6■□□□□ 9.7
PHF6Q8IWS0 RNF149-202ENST00000424632 2010 ntTSL 219.42■□□□□ 0.79e-23■□□□□ 9.7
PHF6Q8IWS0 SNORD89-201ENST00000390981 114 ntBASIC1.41□□□□□ -2.189e-23■□□□□ 9.7
PHF6Q8IWS0 DDX39B-206ENST00000419338 928 ntTSL 517.28■□□□□ 0.363e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-208ENST00000428098 817 ntTSL 315.49■□□□□ 0.073e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-212ENST00000456662 932 ntTSL 515.49■□□□□ 0.073e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-210ENST00000431908 914 ntTSL 514.04□□□□□ -0.163e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC13.88□□□□□ -0.193e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-220ENST00000482195 1232 ntTSL 212.47□□□□□ -0.413e-66■□□□□ 9.6
PHF6Q8IWS0 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.593e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.593e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-219ENST00000481456 5158 ntTSL 211.04□□□□□ -0.643e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.813e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-215ENST00000462256 4027 ntTSL 29.64□□□□□ -0.873e-66■□□□□ 9.6
PHF6Q8IWS0 DDX39B-207ENST00000427214 1005 ntTSL 57.59□□□□□ -1.193e-66■□□□□ 9.6
PHF6Q8IWS0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.272e-6■□□□□ 9.6
PHF6Q8IWS0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.252e-6■□□□□ 9.6
PHF6Q8IWS0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.042e-6■□□□□ 9.6
PHF6Q8IWS0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.79□□□□□ -0.042e-6■□□□□ 9.6
PHF6Q8IWS0 UROD-208ENST00000463092 968 ntTSL 217.23■□□□□ 0.352e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.082e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-214ENST00000478467 857 ntTSL 314.91□□□□□ -0.022e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-205ENST00000460906 820 ntTSL 514.62□□□□□ -0.072e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-207ENST00000462688 901 ntTSL 514.2□□□□□ -0.142e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-213ENST00000473012 632 ntTSL 313.92□□□□□ -0.182e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-221ENST00000636293 1102 ntTSL 5 BASIC13.7□□□□□ -0.222e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-211ENST00000469548 1044 ntTSL 213.43□□□□□ -0.262e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-215ENST00000486699 968 ntTSL 313.35□□□□□ -0.272e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-222ENST00000636836 1173 ntTSL 5 BASIC13.32□□□□□ -0.282e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-219ENST00000494399 1848 ntTSL 213.25□□□□□ -0.292e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-218ENST00000491773 676 ntTSL 213.03□□□□□ -0.322e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-217ENST00000491300 884 ntTSL 512.82□□□□□ -0.362e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-220ENST00000496439 800 ntTSL 212.3□□□□□ -0.442e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-203ENST00000434478 600 ntTSL 311.67□□□□□ -0.542e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-204ENST00000460334 663 ntTSL 511.41□□□□□ -0.582e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-216ENST00000490385 860 ntTSL 510.28□□□□□ -0.762e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-202ENST00000428106 682 ntTSL 39.69□□□□□ -0.862e-7■□□□□ 9.6
PHF6Q8IWS0 UROD-206ENST00000461035 486 ntTSL 1 (best)9.16□□□□□ -0.942e-7■□□□□ 9.6
PHF6Q8IWS0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.492e-6■□□□□ 9.5
PHF6Q8IWS0 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.462e-6■□□□□ 9.5
PHF6Q8IWS0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.38■■□□□ 1.811e-6■□□□□ 9.5
PHF6Q8IWS0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.161e-6■□□□□ 9.5
PHF6Q8IWS0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.012e-6■□□□□ 9.5
PHF6Q8IWS0 MT-TI-201ENST00000387365 69 ntBASIC2.76□□□□□ -1.971e-38■□□□□ 9.5
PHF6Q8IWS0 RACK1-204ENST00000502890 705 ntTSL 311.51□□□□□ -0.576e-18■□□□□ 9.4
PHF6Q8IWS0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.44■■□□□ 1.342e-6■□□□□ 9.4
PHF6Q8IWS0 NRDC-211ENST00000491410 1020 ntTSL 222.89■■□□□ 1.252e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.57■■□□□ 1.22e-6■□□□□ 9.4
PHF6Q8IWS0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.42■■□□□ 1.022e-6■□□□□ 9.4
PHF6Q8IWS0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.42■■□□□ 1.022e-6■□□□□ 9.4
PHF6Q8IWS0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.012e-6■□□□□ 9.4
PHF6Q8IWS0 LMNB1-204ENST00000463908 557 ntTSL 420.58■□□□□ 0.892e-6■□□□□ 9.4
PHF6Q8IWS0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.82e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-205ENST00000585563 1118 ntTSL 319.75■□□□□ 0.752e-6■□□□□ 9.4
PHF6Q8IWS0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.46■□□□□ 0.712e-6■□□□□ 9.4
PHF6Q8IWS0 GPX4-209ENST00000593032 583 ntTSL 319.46■□□□□ 0.712e-6■□□□□ 9.4
PHF6Q8IWS0 LMNB1-206ENST00000492190 738 ntTSL 319.39■□□□□ 0.692e-6■□□□□ 9.4
PHF6Q8IWS0 NRDC-205ENST00000468722 754 ntTSL 319.28■□□□□ 0.682e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-206ENST00000586319 936 ntTSL 319.12■□□□□ 0.652e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.95■□□□□ 0.622e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.86■□□□□ 0.612e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.592e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-212ENST00000589644 1917 ntTSL 218.17■□□□□ 0.52e-6■□□□□ 9.4
PHF6Q8IWS0 BRD2-206ENST00000456339 887 ntTSL 417.83■□□□□ 0.442e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-211ENST00000589247 734 ntTSL 217.41■□□□□ 0.382e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.41■□□□□ 0.382e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-209ENST00000588002 575 ntTSL 517.22■□□□□ 0.352e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.22■□□□□ 0.352e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.17■□□□□ 0.342e-6■□□□□ 9.4
PHF6Q8IWS0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.44■□□□□ 0.222e-6■□□□□ 9.4
PHF6Q8IWS0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.162e-6■□□□□ 9.4
PHF6Q8IWS0 YIF1B-210ENST00000589151 431 ntTSL 215.47■□□□□ 0.072e-6■□□□□ 9.4
PHF6Q8IWS0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.012e-6■□□□□ 9.4
PHF6Q8IWS0 BRD2-213ENST00000495733 3404 ntTSL 214.98□□□□□ -0.012e-6■□□□□ 9.4
PHF6Q8IWS0 LMNB1-203ENST00000460265 3475 ntTSL 1 (best)14.75□□□□□ -0.052e-6■□□□□ 9.4
PHF6Q8IWS0 MAN2A2-203ENST00000557990 956 ntTSL 514.71□□□□□ -0.052e-6■□□□□ 9.4
Retrieved 100 of 4,170 protein–RNA pairs in 72.5 ms