RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
TUBB4B-201ENST00000340384 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
TUBB4B-201ENST00000340384 ABCC9O60706 1549 aa29.74■■■□□ 2.35
TUBB4B-201ENST00000340384 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
TUBB4B-201ENST00000340384 DCAF8L2P0C7V8 631 aa29.09■■■□□ 2.25
TUBB4B-201ENST00000340384 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
TUBB4B-201ENST00000340384 MYO15BQ96JP2 1530 aa28.88■■■□□ 2.21
TUBB4B-201ENST00000340384 NACADO15069 1562 aa28.86■■■□□ 2.21
TUBB4B-201ENST00000340384 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
TUBB4B-201ENST00000340384 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
TUBB4B-201ENST00000340384 UNC13AQ9UPW8 1703 aa28.16■■■□□ 2.1
TUBB4B-201ENST00000340384 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
TUBB4B-201ENST00000340384 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
TUBB4B-201ENST00000340384 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.077e-6■□□□□ 8.9
TUBB4B-201ENST00000340384 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
TUBB4B-201ENST00000340384 EIF4G1Q04637 1599 aaKnown RBP27.15■■□□□ 1.94
TUBB4B-201ENST00000340384 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
TUBB4B-201ENST00000340384 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
TUBB4B-201ENST00000340384 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
TUBB4B-201ENST00000340384 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
TUBB4B-201ENST00000340384 DNAJC5BQ9UF47 199 aa26.96■■□□□ 1.91
TUBB4B-201ENST00000340384 CC2D2AQ9P2K1 1620 aa26.9■■□□□ 1.9
TUBB4B-201ENST00000340384 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
TUBB4B-201ENST00000340384 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
TUBB4B-201ENST00000340384 WIZO95785 1651 aa26.77■■□□□ 1.88
TUBB4B-201ENST00000340384 SMARCA2P51531 1590 aa26.7■■□□□ 1.87
TUBB4B-201ENST00000340384 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
TUBB4B-201ENST00000340384 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
TUBB4B-201ENST00000340384 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
TUBB4B-201ENST00000340384 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
TUBB4B-201ENST00000340384 TOP2AP11388 1531 aaKnown RBP26.47■■□□□ 1.83
TUBB4B-201ENST00000340384 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
TUBB4B-201ENST00000340384 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.75
TUBB4B-201ENST00000340384 NESP48681 1621 aa25.95■■□□□ 1.74
TUBB4B-201ENST00000340384 CFTRP13569 1480 aa25.92■■□□□ 1.74
TUBB4B-201ENST00000340384 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.72
TUBB4B-201ENST00000340384 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
TUBB4B-201ENST00000340384 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
TUBB4B-201ENST00000340384 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
TUBB4B-201ENST00000340384 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
TUBB4B-201ENST00000340384 KIF21AQ7Z4S6 1674 aa25.56■■□□□ 1.68
TUBB4B-201ENST00000340384 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
TUBB4B-201ENST00000340384 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
TUBB4B-201ENST00000340384 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
TUBB4B-201ENST00000340384 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.65
TUBB4B-201ENST00000340384 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
TUBB4B-201ENST00000340384 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
TUBB4B-201ENST00000340384 CUX1P39880 1505 aa25.35■■□□□ 1.65
TUBB4B-201ENST00000340384 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
TUBB4B-201ENST00000340384 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
TUBB4B-201ENST00000340384 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
TUBB4B-201ENST00000340384 WDR62O43379 1518 aa25.28■■□□□ 1.64
TUBB4B-201ENST00000340384 DNMBPQ6XZF7 1577 aa25.27■■□□□ 1.64
TUBB4B-201ENST00000340384 TOP2BQ02880 1626 aa25.22■■□□□ 1.63
TUBB4B-201ENST00000340384 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
TUBB4B-201ENST00000340384 FGD5Q6ZNL6 1462 aa25.14■■□□□ 1.62
TUBB4B-201ENST00000340384 TRIM41Q8WV44 630 aa25.14■■□□□ 1.61
TUBB4B-201ENST00000340384 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
TUBB4B-201ENST00000340384 CUX2O14529 1486 aa25.12■■□□□ 1.61
TUBB4B-201ENST00000340384 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
TUBB4B-201ENST00000340384 SOGA1O94964 1423 aa25.03■■□□□ 1.6
TUBB4B-201ENST00000340384 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
TUBB4B-201ENST00000340384 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
TUBB4B-201ENST00000340384 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
TUBB4B-201ENST00000340384 ZNF608Q9ULD9 1512 aaPredicted RBP24.9■■□□□ 1.58
TUBB4B-201ENST00000340384 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
TUBB4B-201ENST00000340384 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
TUBB4B-201ENST00000340384 RUSC2Q8N2Y8 1516 aa24.84■■□□□ 1.57
TUBB4B-201ENST00000340384 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.563e-11■■■■■ 32.9
TUBB4B-201ENST00000340384 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
TUBB4B-201ENST00000340384 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
TUBB4B-201ENST00000340384 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
TUBB4B-201ENST00000340384 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
TUBB4B-201ENST00000340384 IGF1RP08069 1367 aa24.68■■□□□ 1.54
TUBB4B-201ENST00000340384 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
TUBB4B-201ENST00000340384 GRIN2BQ13224 1484 aa24.63■■□□□ 1.53
TUBB4B-201ENST00000340384 EEA1Q15075 1411 aa24.59■■□□□ 1.53
TUBB4B-201ENST00000340384 ERICH3Q5RHP9 1530 aa24.59■■□□□ 1.53
TUBB4B-201ENST00000340384 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
TUBB4B-201ENST00000340384 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
TUBB4B-201ENST00000340384 SNAPC4Q5SXM2 1469 aa24.55■■□□□ 1.52
TUBB4B-201ENST00000340384 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
TUBB4B-201ENST00000340384 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
TUBB4B-201ENST00000340384 MAGI1Q96QZ7 1491 aaPredicted RBP24.48■■□□□ 1.51
TUBB4B-201ENST00000340384 PRXQ9BXM0 1461 aa24.48■■□□□ 1.51
TUBB4B-201ENST00000340384 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
TUBB4B-201ENST00000340384 FHAD1B1AJZ9 1412 aa24.45■■□□□ 1.5
TUBB4B-201ENST00000340384 CUL7Q14999 1698 aa24.42■■□□□ 1.5
TUBB4B-201ENST00000340384 SYNJ2O15056 1496 aa24.41■■□□□ 1.5
TUBB4B-201ENST00000340384 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
TUBB4B-201ENST00000340384 FBLN2P98095 1184 aa24.36■■□□□ 1.49
TUBB4B-201ENST00000340384 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
TUBB4B-201ENST00000340384 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
TUBB4B-201ENST00000340384 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.49
TUBB4B-201ENST00000340384 KIF21BO75037 1637 aa24.32■■□□□ 1.48
TUBB4B-201ENST00000340384 CHD1O14646 1710 aa24.3■■□□□ 1.48
TUBB4B-201ENST00000340384 NUP160Q12769 1436 aa24.23■■□□□ 1.47
TUBB4B-201ENST00000340384 GOLGA3Q08378 1498 aa24.23■■□□□ 1.47
TUBB4B-201ENST00000340384 CEP170Q5SW79 1584 aa24.22■■□□□ 1.47
TUBB4B-201ENST00000340384 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms