RNA–Protein interactions for RNA: ENST00000329420.12

YIF1B-201, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 3 BASIC

Gene YIF1B, Length 964 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-201ENST00000329420 NISCHQ9Y2I1 1504 aa40.7■■■■■ 4.11
YIF1B-201ENST00000329420 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
YIF1B-201ENST00000329420 ABCC9O60706 1549 aa35.8■■■■□ 3.32
YIF1B-201ENST00000329420 RB1CC1Q8TDY2 1594 aa34.17■■■■□ 3.06
YIF1B-201ENST00000329420 NACADO15069 1562 aa34.13■■■■□ 3.05
YIF1B-201ENST00000329420 MYO15BQ96JP2 1530 aa33.96■■■■□ 3.03
YIF1B-201ENST00000329420 DCAF8L2P0C7V8 631 aa33.88■■■■□ 3.01
YIF1B-201ENST00000329420 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
YIF1B-201ENST00000329420 DNAJC5BQ9UF47 199 aa33.86■■■■□ 3.01
YIF1B-201ENST00000329420 DCAF1Q9Y4B6 1507 aa33.71■■■□□ 2.99
YIF1B-201ENST00000329420 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
YIF1B-201ENST00000329420 PABPN1Q86U42 306 aaKnown RBP eCLIP33.33■■■□□ 2.93
YIF1B-201ENST00000329420 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.92
YIF1B-201ENST00000329420 SCRIBQ14160 1630 aa32.97■■■□□ 2.87
YIF1B-201ENST00000329420 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
YIF1B-201ENST00000329420 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
YIF1B-201ENST00000329420 CC2D2AQ9P2K1 1620 aa32.3■■■□□ 2.76
YIF1B-201ENST00000329420 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
YIF1B-201ENST00000329420 SMARCA4P51532 1647 aa31.59■■■□□ 2.65
YIF1B-201ENST00000329420 NCAPD3P42695 1498 aa31.56■■■□□ 2.64
YIF1B-201ENST00000329420 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
YIF1B-201ENST00000329420 BAZ1AQ9NRL2 1556 aaPredicted RBP31.51■■■□□ 2.63
YIF1B-201ENST00000329420 SMARCA2P51531 1590 aa31.4■■■□□ 2.62
YIF1B-201ENST00000329420 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
YIF1B-201ENST00000329420 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
YIF1B-201ENST00000329420 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
YIF1B-201ENST00000329420 DNAJC5Q9H3Z4 198 aa31.21■■■□□ 2.59
YIF1B-201ENST00000329420 BAZ1BQ9UIG0 1483 aaKnown RBP31.15■■■□□ 2.58
YIF1B-201ENST00000329420 WIZO95785 1651 aa30.96■■■□□ 2.55
YIF1B-201ENST00000329420 RSF1Q96T23 1441 aaPredicted RBP30.95■■■□□ 2.54
YIF1B-201ENST00000329420 CUX2O14529 1486 aa30.92■■■□□ 2.54
YIF1B-201ENST00000329420 ERCC6Q03468 1493 aa30.89■■■□□ 2.53
YIF1B-201ENST00000329420 NESP48681 1621 aa30.8■■■□□ 2.52
YIF1B-201ENST00000329420 LAMC3Q9Y6N6 1575 aa30.68■■■□□ 2.5
YIF1B-201ENST00000329420 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
YIF1B-201ENST00000329420 CADPSQ9ULU8 1353 aa30.58■■■□□ 2.49
YIF1B-201ENST00000329420 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
YIF1B-201ENST00000329420 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
YIF1B-201ENST00000329420 CFTRP13569 1480 aa30.38■■■□□ 2.45
YIF1B-201ENST00000329420 KIF21AQ7Z4S6 1674 aa30.38■■■□□ 2.45
YIF1B-201ENST00000329420 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
YIF1B-201ENST00000329420 FANCD2Q9BXW9 1451 aa30.19■■■□□ 2.42
YIF1B-201ENST00000329420 MRC2Q9UBG0 1479 aa30.16■■■□□ 2.42
YIF1B-201ENST00000329420 CEP164Q9UPV0 1460 aa30.14■■■□□ 2.42
YIF1B-201ENST00000329420 WDR62O43379 1518 aa30.12■■■□□ 2.41
YIF1B-201ENST00000329420 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
YIF1B-201ENST00000329420 URB2Q14146 1524 aaKnown RBP29.95■■■□□ 2.38
YIF1B-201ENST00000329420 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
YIF1B-201ENST00000329420 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
YIF1B-201ENST00000329420 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
YIF1B-201ENST00000329420 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
YIF1B-201ENST00000329420 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
YIF1B-201ENST00000329420 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
YIF1B-201ENST00000329420 OSCARQ8IYS5 282 aa29.49■■■□□ 2.31
YIF1B-201ENST00000329420 ZNF608Q9ULD9 1512 aaPredicted RBP29.46■■■□□ 2.31
YIF1B-201ENST00000329420 POLA1P09884 1462 aaPredicted RBP29.45■■■□□ 2.31
YIF1B-201ENST00000329420 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
YIF1B-201ENST00000329420 CUX1P39880 1505 aa29.42■■■□□ 2.3
YIF1B-201ENST00000329420 FGD5Q6ZNL6 1462 aa29.31■■■□□ 2.28
YIF1B-201ENST00000329420 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
YIF1B-201ENST00000329420 SOGA1O94964 1423 aa29.29■■■□□ 2.28
YIF1B-201ENST00000329420 EIF4G3O43432 1585 aaKnown RBP29.29■■■□□ 2.28
YIF1B-201ENST00000329420 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.274e-7■■■■□ 19.6
YIF1B-201ENST00000329420 TDRD9Q8NDG6 1382 aaKnown RBP29.15■■■□□ 2.26
YIF1B-201ENST00000329420 WDR97A6NE52 1622 aa29.15■■■□□ 2.26
YIF1B-201ENST00000329420 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
YIF1B-201ENST00000329420 RIMBP3CA6NJZ7 1639 aa29.11■■■□□ 2.25
YIF1B-201ENST00000329420 RIMBP3BA6NNM3 1639 aa29.11■■■□□ 2.25
YIF1B-201ENST00000329420 RIMBP3Q9UFD9 1639 aa29.11■■■□□ 2.25
YIF1B-201ENST00000329420 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
YIF1B-201ENST00000329420 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
YIF1B-201ENST00000329420 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
YIF1B-201ENST00000329420 ABCA10Q8WWZ4 1543 aa29.07■■■□□ 2.24
YIF1B-201ENST00000329420 ARHGEF11O15085 1522 aa29.01■■■□□ 2.23
YIF1B-201ENST00000329420 GRIN2BQ13224 1484 aa28.97■■■□□ 2.23
YIF1B-201ENST00000329420 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
YIF1B-201ENST00000329420 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.22
YIF1B-201ENST00000329420 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
YIF1B-201ENST00000329420 MAGI1Q96QZ7 1491 aaPredicted RBP28.93■■■□□ 2.22
YIF1B-201ENST00000329420 CHD1O14646 1710 aa28.92■■■□□ 2.22
YIF1B-201ENST00000329420 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
YIF1B-201ENST00000329420 CYB5RLQ6IPT4 315 aa28.83■■■□□ 2.21
YIF1B-201ENST00000329420 SYNJ2O15056 1496 aa28.82■■■□□ 2.2
YIF1B-201ENST00000329420 FBLN2P98095 1184 aa28.81■■■□□ 2.2
YIF1B-201ENST00000329420 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
YIF1B-201ENST00000329420 ARAP1Q96P48 1450 aa28.73■■■□□ 2.19
YIF1B-201ENST00000329420 CLASP1Q7Z460 1538 aa28.71■■■□□ 2.19
YIF1B-201ENST00000329420 ERICH3Q5RHP9 1530 aa28.69■■■□□ 2.18
YIF1B-201ENST00000329420 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
YIF1B-201ENST00000329420 FHAD1B1AJZ9 1412 aa28.61■■■□□ 2.17
YIF1B-201ENST00000329420 GRIN2AQ12879 1464 aa28.61■■■□□ 2.17
YIF1B-201ENST00000329420 NUP160Q12769 1436 aa28.55■■■□□ 2.16
YIF1B-201ENST00000329420 TRHP20396 242 aaPredicted RBP28.54■■■□□ 2.16
YIF1B-201ENST00000329420 IGF1RP08069 1367 aa28.51■■■□□ 2.16
YIF1B-201ENST00000329420 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
YIF1B-201ENST00000329420 CEP170Q5SW79 1584 aa28.49■■■□□ 2.15
YIF1B-201ENST00000329420 SHROOM2Q13796 1616 aa28.35■■■□□ 2.13
YIF1B-201ENST00000329420 CUL7Q14999 1698 aa28.34■■■□□ 2.13
YIF1B-201ENST00000329420 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
YIF1B-201ENST00000329420 CARMIL1Q5VZK9 1371 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms