RNA–Protein interactions for RNA: ENST00000496439.1

UROD-220, Transcript of uroporphyrinogen decarboxylase, humanhuman

TSL 2

Gene UROD, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UROD-220ENST00000496439 NISCHQ9Y2I1 1504 aa27.3■■□□□ 1.96
UROD-220ENST00000496439 CCDC180Q9P1Z9 1646 aa24.26■■□□□ 1.47
UROD-220ENST00000496439 ABCC9O60706 1549 aa23.79■■□□□ 1.4
UROD-220ENST00000496439 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
UROD-220ENST00000496439 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
UROD-220ENST00000496439 NACADO15069 1562 aa22.8■■□□□ 1.24
UROD-220ENST00000496439 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
UROD-220ENST00000496439 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
UROD-220ENST00000496439 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
UROD-220ENST00000496439 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
UROD-220ENST00000496439 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
UROD-220ENST00000496439 SCRIBQ14160 1630 aa22.2■■□□□ 1.15
UROD-220ENST00000496439 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
UROD-220ENST00000496439 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
UROD-220ENST00000496439 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
UROD-220ENST00000496439 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
UROD-220ENST00000496439 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
UROD-220ENST00000496439 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
UROD-220ENST00000496439 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
UROD-220ENST00000496439 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
UROD-220ENST00000496439 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
UROD-220ENST00000496439 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
UROD-220ENST00000496439 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
UROD-220ENST00000496439 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
UROD-220ENST00000496439 PEG3Q9GZU2 1588 aa20.95■□□□□ 0.94
UROD-220ENST00000496439 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
UROD-220ENST00000496439 BAZ1BQ9UIG0 1483 aaKnown RBP20.92■□□□□ 0.94
UROD-220ENST00000496439 WIZO95785 1651 aa20.85■□□□□ 0.93
UROD-220ENST00000496439 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
UROD-220ENST00000496439 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
UROD-220ENST00000496439 NESP48681 1621 aa20.58■□□□□ 0.89
UROD-220ENST00000496439 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
UROD-220ENST00000496439 LAMC3Q9Y6N6 1575 aa20.49■□□□□ 0.87
UROD-220ENST00000496439 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
UROD-220ENST00000496439 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
UROD-220ENST00000496439 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
UROD-220ENST00000496439 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
UROD-220ENST00000496439 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
UROD-220ENST00000496439 CFTRP13569 1480 aa20.3■□□□□ 0.84
UROD-220ENST00000496439 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
UROD-220ENST00000496439 CUX2O14529 1486 aa20.23■□□□□ 0.83
UROD-220ENST00000496439 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
UROD-220ENST00000496439 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
UROD-220ENST00000496439 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
UROD-220ENST00000496439 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
UROD-220ENST00000496439 WDR62O43379 1518 aa20.09■□□□□ 0.81
UROD-220ENST00000496439 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
UROD-220ENST00000496439 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
UROD-220ENST00000496439 DNMBPQ6XZF7 1577 aa19.88■□□□□ 0.77
UROD-220ENST00000496439 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
UROD-220ENST00000496439 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
UROD-220ENST00000496439 CUX1P39880 1505 aa19.76■□□□□ 0.75
UROD-220ENST00000496439 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
UROD-220ENST00000496439 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
UROD-220ENST00000496439 ZNF608Q9ULD9 1512 aaPredicted RBP19.7■□□□□ 0.74
UROD-220ENST00000496439 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
UROD-220ENST00000496439 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
UROD-220ENST00000496439 SOGA1O94964 1423 aa19.64■□□□□ 0.73
UROD-220ENST00000496439 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
UROD-220ENST00000496439 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
UROD-220ENST00000496439 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
UROD-220ENST00000496439 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.73
UROD-220ENST00000496439 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
UROD-220ENST00000496439 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.721e-7■■■■■ 43.5
UROD-220ENST00000496439 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
UROD-220ENST00000496439 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
UROD-220ENST00000496439 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
UROD-220ENST00000496439 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
UROD-220ENST00000496439 GAPVD1Q14C86 1478 aa19.42■□□□□ 0.7
UROD-220ENST00000496439 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
UROD-220ENST00000496439 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
UROD-220ENST00000496439 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
UROD-220ENST00000496439 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
UROD-220ENST00000496439 CHD1O14646 1710 aa19.38■□□□□ 0.69
UROD-220ENST00000496439 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
UROD-220ENST00000496439 FBLN2P98095 1184 aa19.37■□□□□ 0.69
UROD-220ENST00000496439 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
UROD-220ENST00000496439 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
UROD-220ENST00000496439 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
UROD-220ENST00000496439 ADAMTS12P58397 1594 aa19.25■□□□□ 0.67
UROD-220ENST00000496439 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
UROD-220ENST00000496439 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
UROD-220ENST00000496439 FHAD1B1AJZ9 1412 aa19.18■□□□□ 0.66
UROD-220ENST00000496439 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
UROD-220ENST00000496439 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
UROD-220ENST00000496439 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
UROD-220ENST00000496439 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
UROD-220ENST00000496439 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
UROD-220ENST00000496439 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
UROD-220ENST00000496439 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
UROD-220ENST00000496439 IGF1RP08069 1367 aa19.11■□□□□ 0.65
UROD-220ENST00000496439 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
UROD-220ENST00000496439 CUL7Q14999 1698 aa19.08■□□□□ 0.65
UROD-220ENST00000496439 RUSC2Q8N2Y8 1516 aa19.07■□□□□ 0.64
UROD-220ENST00000496439 NUP160Q12769 1436 aa19.07■□□□□ 0.64
UROD-220ENST00000496439 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
UROD-220ENST00000496439 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
UROD-220ENST00000496439 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
UROD-220ENST00000496439 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
UROD-220ENST00000496439 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms