RNA–Protein interactions for RNA: ENST00000589151.1

YIF1B-210, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1B, Length 431 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-210ENST00000589151 NISCHQ9Y2I1 1504 aa36.68■■■■□ 3.46
YIF1B-210ENST00000589151 CCDC180Q9P1Z9 1646 aa32.15■■■□□ 2.74
YIF1B-210ENST00000589151 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.51
YIF1B-210ENST00000589151 ABCC9O60706 1549 aa30.51■■■□□ 2.47
YIF1B-210ENST00000589151 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
YIF1B-210ENST00000589151 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
YIF1B-210ENST00000589151 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
YIF1B-210ENST00000589151 NACADO15069 1562 aa30.03■■■□□ 2.4
YIF1B-210ENST00000589151 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
YIF1B-210ENST00000589151 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
YIF1B-210ENST00000589151 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
YIF1B-210ENST00000589151 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
YIF1B-210ENST00000589151 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
YIF1B-210ENST00000589151 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
YIF1B-210ENST00000589151 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
YIF1B-210ENST00000589151 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
YIF1B-210ENST00000589151 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
YIF1B-210ENST00000589151 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
YIF1B-210ENST00000589151 MROH2BQ7Z745 1585 aa28.27■■■□□ 2.12
YIF1B-210ENST00000589151 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
YIF1B-210ENST00000589151 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
YIF1B-210ENST00000589151 WIZO95785 1651 aa28■■■□□ 2.07
YIF1B-210ENST00000589151 PEG3Q9GZU2 1588 aa27.96■■■□□ 2.07
YIF1B-210ENST00000589151 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
YIF1B-210ENST00000589151 ATAD2BQ9ULI0 1458 aa27.85■■■□□ 2.05
YIF1B-210ENST00000589151 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
YIF1B-210ENST00000589151 NCAPD3P42695 1498 aa27.7■■■□□ 2.03
YIF1B-210ENST00000589151 BAZ1BQ9UIG0 1483 aaKnown RBP27.67■■■□□ 2.02
YIF1B-210ENST00000589151 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
YIF1B-210ENST00000589151 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
YIF1B-210ENST00000589151 CCDC88BA6NC98 1476 aa27.46■■□□□ 1.99
YIF1B-210ENST00000589151 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
YIF1B-210ENST00000589151 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
YIF1B-210ENST00000589151 CFTRP13569 1480 aa26.99■■□□□ 1.91
YIF1B-210ENST00000589151 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
YIF1B-210ENST00000589151 PRDM2Q13029 1718 aa26.81■■□□□ 1.88
YIF1B-210ENST00000589151 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
YIF1B-210ENST00000589151 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
YIF1B-210ENST00000589151 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
YIF1B-210ENST00000589151 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
YIF1B-210ENST00000589151 NESP48681 1621 aa26.68■■□□□ 1.86
YIF1B-210ENST00000589151 FANCD2Q9BXW9 1451 aa26.62■■□□□ 1.85
YIF1B-210ENST00000589151 PDS5BQ9NTI5 1447 aa26.6■■□□□ 1.85
YIF1B-210ENST00000589151 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
YIF1B-210ENST00000589151 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
YIF1B-210ENST00000589151 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
YIF1B-210ENST00000589151 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
YIF1B-210ENST00000589151 CUX1P39880 1505 aa26.45■■□□□ 1.83
YIF1B-210ENST00000589151 KIF21AQ7Z4S6 1674 aa26.37■■□□□ 1.81
YIF1B-210ENST00000589151 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
YIF1B-210ENST00000589151 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
YIF1B-210ENST00000589151 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
YIF1B-210ENST00000589151 EEA1Q15075 1411 aa26.27■■□□□ 1.8
YIF1B-210ENST00000589151 MRC2Q9UBG0 1479 aa26.25■■□□□ 1.79
YIF1B-210ENST00000589151 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
YIF1B-210ENST00000589151 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
YIF1B-210ENST00000589151 SOGA1O94964 1423 aa26.2■■□□□ 1.78
YIF1B-210ENST00000589151 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
YIF1B-210ENST00000589151 POLA1P09884 1462 aaPredicted RBP26.14■■□□□ 1.78
YIF1B-210ENST00000589151 WDR62O43379 1518 aa26.11■■□□□ 1.77
YIF1B-210ENST00000589151 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
YIF1B-210ENST00000589151 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
YIF1B-210ENST00000589151 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
YIF1B-210ENST00000589151 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
YIF1B-210ENST00000589151 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
YIF1B-210ENST00000589151 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
YIF1B-210ENST00000589151 CUX2O14529 1486 aa26■■□□□ 1.75
YIF1B-210ENST00000589151 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
YIF1B-210ENST00000589151 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
YIF1B-210ENST00000589151 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
YIF1B-210ENST00000589151 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
YIF1B-210ENST00000589151 KIF21BO75037 1637 aa25.86■■□□□ 1.73
YIF1B-210ENST00000589151 IGF1RP08069 1367 aa25.83■■□□□ 1.73
YIF1B-210ENST00000589151 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
YIF1B-210ENST00000589151 GOLGA3Q08378 1498 aa25.81■■□□□ 1.72
YIF1B-210ENST00000589151 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
YIF1B-210ENST00000589151 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
YIF1B-210ENST00000589151 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
YIF1B-210ENST00000589151 ERICH3Q5RHP9 1530 aa25.76■■□□□ 1.71
YIF1B-210ENST00000589151 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
YIF1B-210ENST00000589151 EHMT2Q96KQ7 1210 aa25.7■■□□□ 1.7
YIF1B-210ENST00000589151 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
YIF1B-210ENST00000589151 CUL7Q14999 1698 aa25.69■■□□□ 1.7
YIF1B-210ENST00000589151 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
YIF1B-210ENST00000589151 ZNF608Q9ULD9 1512 aaPredicted RBP25.67■■□□□ 1.7
YIF1B-210ENST00000589151 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.72e-6■■■■□ 23.6
YIF1B-210ENST00000589151 UBTFP17480 764 aaKnown RBP25.66■■□□□ 1.7
YIF1B-210ENST00000589151 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
YIF1B-210ENST00000589151 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
YIF1B-210ENST00000589151 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
YIF1B-210ENST00000589151 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
YIF1B-210ENST00000589151 ADAMTS12P58397 1594 aa25.49■■□□□ 1.67
YIF1B-210ENST00000589151 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
YIF1B-210ENST00000589151 CEP162Q5TB80 1403 aa25.47■■□□□ 1.67
YIF1B-210ENST00000589151 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
YIF1B-210ENST00000589151 CLIP1P30622 1438 aa25.37■■□□□ 1.65
YIF1B-210ENST00000589151 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
YIF1B-210ENST00000589151 GRIN2AQ12879 1464 aa25.31■■□□□ 1.64
YIF1B-210ENST00000589151 CTTNBP2Q8WZ74 1663 aa25.31■■□□□ 1.64
YIF1B-210ENST00000589151 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms