RNA–Protein interactions for RNA: ENST00000502890.5

RACK1-204, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 705 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-204ENST00000502890 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
RACK1-204ENST00000502890 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
RACK1-204ENST00000502890 ABCC9O60706 1549 aa21.9■■□□□ 1.1
RACK1-204ENST00000502890 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.95
RACK1-204ENST00000502890 NACADO15069 1562 aa20.95■□□□□ 0.94
RACK1-204ENST00000502890 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
RACK1-204ENST00000502890 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
RACK1-204ENST00000502890 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
RACK1-204ENST00000502890 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
RACK1-204ENST00000502890 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
RACK1-204ENST00000502890 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
RACK1-204ENST00000502890 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
RACK1-204ENST00000502890 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.84
RACK1-204ENST00000502890 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
RACK1-204ENST00000502890 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
RACK1-204ENST00000502890 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
RACK1-204ENST00000502890 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
RACK1-204ENST00000502890 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
RACK1-204ENST00000502890 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
RACK1-204ENST00000502890 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
RACK1-204ENST00000502890 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
RACK1-204ENST00000502890 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
RACK1-204ENST00000502890 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
RACK1-204ENST00000502890 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
RACK1-204ENST00000502890 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
RACK1-204ENST00000502890 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
RACK1-204ENST00000502890 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
RACK1-204ENST00000502890 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
RACK1-204ENST00000502890 CUX2O14529 1486 aa18.9■□□□□ 0.62
RACK1-204ENST00000502890 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
RACK1-204ENST00000502890 NESP48681 1621 aa18.84■□□□□ 0.61
RACK1-204ENST00000502890 WIZO95785 1651 aa18.79■□□□□ 0.6
RACK1-204ENST00000502890 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
RACK1-204ENST00000502890 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
RACK1-204ENST00000502890 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
RACK1-204ENST00000502890 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
RACK1-204ENST00000502890 THOC2Q8NI27 1593 aaKnown RBP18.65■□□□□ 0.58
RACK1-204ENST00000502890 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
RACK1-204ENST00000502890 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
RACK1-204ENST00000502890 CFTRP13569 1480 aa18.56■□□□□ 0.56
RACK1-204ENST00000502890 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
RACK1-204ENST00000502890 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
RACK1-204ENST00000502890 FANCD2Q9BXW9 1451 aa18.49■□□□□ 0.55
RACK1-204ENST00000502890 WDR62O43379 1518 aa18.48■□□□□ 0.55
RACK1-204ENST00000502890 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
RACK1-204ENST00000502890 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
RACK1-204ENST00000502890 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
RACK1-204ENST00000502890 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
RACK1-204ENST00000502890 TOPBP1Q92547 1522 aa18.16■□□□□ 0.5
RACK1-204ENST00000502890 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
RACK1-204ENST00000502890 DNMBPQ6XZF7 1577 aa18.12■□□□□ 0.49
RACK1-204ENST00000502890 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
RACK1-204ENST00000502890 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
RACK1-204ENST00000502890 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
RACK1-204ENST00000502890 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
RACK1-204ENST00000502890 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
RACK1-204ENST00000502890 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
RACK1-204ENST00000502890 SOGA1O94964 1423 aa17.93■□□□□ 0.46
RACK1-204ENST00000502890 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
RACK1-204ENST00000502890 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.456e-12■■■■■ 36.9
RACK1-204ENST00000502890 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
RACK1-204ENST00000502890 CUX1P39880 1505 aa17.88■□□□□ 0.45
RACK1-204ENST00000502890 RAD54L2Q9Y4B4 1467 aa17.87■□□□□ 0.45
RACK1-204ENST00000502890 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
RACK1-204ENST00000502890 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
RACK1-204ENST00000502890 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
RACK1-204ENST00000502890 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
RACK1-204ENST00000502890 CHD1O14646 1710 aa17.76■□□□□ 0.43
RACK1-204ENST00000502890 FBLN2P98095 1184 aa17.76■□□□□ 0.43
RACK1-204ENST00000502890 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
RACK1-204ENST00000502890 RIMBP3CA6NJZ7 1639 aa17.72■□□□□ 0.43
RACK1-204ENST00000502890 RIMBP3BA6NNM3 1639 aa17.72■□□□□ 0.43
RACK1-204ENST00000502890 RIMBP3Q9UFD9 1639 aa17.72■□□□□ 0.43
RACK1-204ENST00000502890 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
RACK1-204ENST00000502890 ARHGEF11O15085 1522 aa17.72■□□□□ 0.43
RACK1-204ENST00000502890 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
RACK1-204ENST00000502890 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
RACK1-204ENST00000502890 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
RACK1-204ENST00000502890 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
RACK1-204ENST00000502890 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
RACK1-204ENST00000502890 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
RACK1-204ENST00000502890 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
RACK1-204ENST00000502890 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
RACK1-204ENST00000502890 PBRM1Q86U86 1689 aa17.64■□□□□ 0.41
RACK1-204ENST00000502890 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
RACK1-204ENST00000502890 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
RACK1-204ENST00000502890 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
RACK1-204ENST00000502890 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
RACK1-204ENST00000502890 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
RACK1-204ENST00000502890 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
RACK1-204ENST00000502890 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
RACK1-204ENST00000502890 NUP160Q12769 1436 aa17.47■□□□□ 0.39
RACK1-204ENST00000502890 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
RACK1-204ENST00000502890 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
RACK1-204ENST00000502890 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
RACK1-204ENST00000502890 IGF1RP08069 1367 aa17.33■□□□□ 0.36
RACK1-204ENST00000502890 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
RACK1-204ENST00000502890 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
RACK1-204ENST00000502890 CUL7Q14999 1698 aa17.29■□□□□ 0.36
RACK1-204ENST00000502890 ERCC6L2Q5T890 1561 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms