RNA–Protein interactions for RNA: ENST00000592246.5

YIF1B-215, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 3 BASIC

Gene YIF1B, Length 936 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-215ENST00000592246 NISCHQ9Y2I1 1504 aa36.79■■■■□ 3.48
YIF1B-215ENST00000592246 CCDC180Q9P1Z9 1646 aa32.76■■■□□ 2.83
YIF1B-215ENST00000592246 ABCC9O60706 1549 aa32.4■■■□□ 2.78
YIF1B-215ENST00000592246 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
YIF1B-215ENST00000592246 NACADO15069 1562 aa30.83■■■□□ 2.53
YIF1B-215ENST00000592246 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
YIF1B-215ENST00000592246 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
YIF1B-215ENST00000592246 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
YIF1B-215ENST00000592246 DNAJC5BQ9UF47 199 aa30.56■■■□□ 2.48
YIF1B-215ENST00000592246 DCAF1Q9Y4B6 1507 aa30.43■■■□□ 2.46
YIF1B-215ENST00000592246 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
YIF1B-215ENST00000592246 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
YIF1B-215ENST00000592246 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
YIF1B-215ENST00000592246 SCRIBQ14160 1630 aa29.88■■■□□ 2.37
YIF1B-215ENST00000592246 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
YIF1B-215ENST00000592246 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
YIF1B-215ENST00000592246 CC2D2AQ9P2K1 1620 aa29.22■■■□□ 2.27
YIF1B-215ENST00000592246 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
YIF1B-215ENST00000592246 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
YIF1B-215ENST00000592246 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
YIF1B-215ENST00000592246 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
YIF1B-215ENST00000592246 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
YIF1B-215ENST00000592246 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
YIF1B-215ENST00000592246 DNAJC5Q9H3Z4 198 aa28.37■■■□□ 2.13
YIF1B-215ENST00000592246 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
YIF1B-215ENST00000592246 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
YIF1B-215ENST00000592246 PEG3Q9GZU2 1588 aa28.32■■■□□ 2.12
YIF1B-215ENST00000592246 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
YIF1B-215ENST00000592246 CUX2O14529 1486 aa28.08■■■□□ 2.09
YIF1B-215ENST00000592246 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
YIF1B-215ENST00000592246 WIZO95785 1651 aa28.03■■■□□ 2.08
YIF1B-215ENST00000592246 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
YIF1B-215ENST00000592246 NESP48681 1621 aa27.84■■■□□ 2.05
YIF1B-215ENST00000592246 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
YIF1B-215ENST00000592246 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
YIF1B-215ENST00000592246 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
YIF1B-215ENST00000592246 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
YIF1B-215ENST00000592246 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
YIF1B-215ENST00000592246 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
YIF1B-215ENST00000592246 CFTRP13569 1480 aa27.44■■□□□ 1.98
YIF1B-215ENST00000592246 CCDC88BA6NC98 1476 aa27.4■■□□□ 1.98
YIF1B-215ENST00000592246 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
YIF1B-215ENST00000592246 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
YIF1B-215ENST00000592246 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
YIF1B-215ENST00000592246 WDR62O43379 1518 aa27.21■■□□□ 1.95
YIF1B-215ENST00000592246 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
YIF1B-215ENST00000592246 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
YIF1B-215ENST00000592246 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
YIF1B-215ENST00000592246 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
YIF1B-215ENST00000592246 TOPBP1Q92547 1522 aa26.86■■□□□ 1.89
YIF1B-215ENST00000592246 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
YIF1B-215ENST00000592246 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
YIF1B-215ENST00000592246 OSCARQ8IYS5 282 aa26.75■■□□□ 1.87
YIF1B-215ENST00000592246 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
YIF1B-215ENST00000592246 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
YIF1B-215ENST00000592246 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
YIF1B-215ENST00000592246 CUX1P39880 1505 aa26.61■■□□□ 1.85
YIF1B-215ENST00000592246 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
YIF1B-215ENST00000592246 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
YIF1B-215ENST00000592246 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
YIF1B-215ENST00000592246 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
YIF1B-215ENST00000592246 SOGA1O94964 1423 aa26.48■■□□□ 1.83
YIF1B-215ENST00000592246 AQRO60306 1485 aaKnown RBP eCLIP26.44■■□□□ 1.825e-7■■■□□ 18.9
YIF1B-215ENST00000592246 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
YIF1B-215ENST00000592246 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
YIF1B-215ENST00000592246 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
YIF1B-215ENST00000592246 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
YIF1B-215ENST00000592246 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
YIF1B-215ENST00000592246 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
YIF1B-215ENST00000592246 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
YIF1B-215ENST00000592246 SYNJ1O43426 1573 aa26.33■■□□□ 1.8
YIF1B-215ENST00000592246 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
YIF1B-215ENST00000592246 ARHGEF11O15085 1522 aa26.29■■□□□ 1.8
YIF1B-215ENST00000592246 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
YIF1B-215ENST00000592246 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
YIF1B-215ENST00000592246 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
YIF1B-215ENST00000592246 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
YIF1B-215ENST00000592246 CHD1O14646 1710 aa26.19■■□□□ 1.78
YIF1B-215ENST00000592246 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
YIF1B-215ENST00000592246 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
YIF1B-215ENST00000592246 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
YIF1B-215ENST00000592246 CYB5RLQ6IPT4 315 aa26.13■■□□□ 1.77
YIF1B-215ENST00000592246 FBLN2P98095 1184 aa26.1■■□□□ 1.77
YIF1B-215ENST00000592246 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
YIF1B-215ENST00000592246 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
YIF1B-215ENST00000592246 ARAP1Q96P48 1450 aa26■■□□□ 1.75
YIF1B-215ENST00000592246 TRHP20396 242 aaPredicted RBP26■■□□□ 1.75
YIF1B-215ENST00000592246 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
YIF1B-215ENST00000592246 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
YIF1B-215ENST00000592246 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
YIF1B-215ENST00000592246 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
YIF1B-215ENST00000592246 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
YIF1B-215ENST00000592246 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
YIF1B-215ENST00000592246 NUP160Q12769 1436 aa25.79■■□□□ 1.72
YIF1B-215ENST00000592246 CEP170Q5SW79 1584 aa25.77■■□□□ 1.72
YIF1B-215ENST00000592246 IGF1RP08069 1367 aa25.75■■□□□ 1.71
YIF1B-215ENST00000592246 CUL7Q14999 1698 aa25.66■■□□□ 1.7
YIF1B-215ENST00000592246 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
YIF1B-215ENST00000592246 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
YIF1B-215ENST00000592246 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms